-
2
-
-
0033397947
-
Procaryotes and Phytochrome. the connection to chromophores and signaling
-
J. Hughes, and T. Lamparter Procaryotes and Phytochrome. The connection to chromophores and signaling Plant Physiol. 121 1999 1059 1068
-
(1999)
Plant Physiol.
, vol.121
, pp. 1059-1068
-
-
Hughes, J.1
Lamparter, T.2
-
3
-
-
0025228693
-
Refined three-dimensional structure of phycoerythrocyanin from the cyanobacterium Mastigocladus laminosus at 2.7 Å
-
M.R. Duerring, R. Huber, W. Bode, R. Ruembeli, and H. Zuber Refined three-dimensional structure of phycoerythrocyanin from the cyanobacterium Mastigocladus laminosus at 2.7 Å J. Mol. Biol. 211 1990 633 644
-
(1990)
J. Mol. Biol.
, vol.211
, pp. 633-644
-
-
Duerring, M.R.1
Huber, R.2
Bode, W.3
Ruembeli, R.4
Zuber, H.5
-
4
-
-
0031006022
-
One century of protein crystallography: The phycobiliproteins
-
M. Betz One century of protein crystallography: the phycobiliproteins Biol. Chem. 378 1997 167 176
-
(1997)
Biol. Chem.
, vol.378
, pp. 167-176
-
-
Betz, M.1
-
5
-
-
4444263016
-
Photochromic chromopeptides derived from phycoerythrocyanin: Biophysical and biochemical characterization
-
K.H. Zhao, J.P. Zhu, M.G. Deng, M. Zhou, M. Storf, A. Parbel, and H. Scheer Photochromic chromopeptides derived from phycoerythrocyanin: biophysical and biochemical characterization Photochem. Photobiol. Sci. 2 2003 741 748
-
(2003)
Photochem. Photobiol. Sci.
, vol.2
, pp. 741-748
-
-
Zhao, K.H.1
Zhu, J.P.2
Deng, M.G.3
Zhou, M.4
Storf, M.5
Parbel, A.6
Scheer, H.7
-
6
-
-
0030695502
-
Chromophore assignment in phycoerythrocyanin from Mastigocladus laminosus
-
A. Parbel, K.H. Zhao, J. Breton, and H. Scheer Chromophore assignment in phycoerythrocyanin from Mastigocladus laminosus Photosynth. Res. 54 1997 25 34
-
(1997)
Photosynth. Res.
, vol.54
, pp. 25-34
-
-
Parbel, A.1
Zhao, K.H.2
Breton, J.3
Scheer, H.4
-
7
-
-
84987045394
-
Photochemistry of phycobiliproteins: Reciprocity of reversible photochemistry and aggregation in phycoerythrocyanin from Mastigocladus laminosus
-
S. Siebzehnrübl, S.F. Fischer, W. Kufer, and H. Scheer Photochemistry of phycobiliproteins: reciprocity of reversible photochemistry and aggregation in phycoerythrocyanin from Mastigocladus laminosus Photochem. Photobiol. 49 1989 753 761
-
(1989)
Photochem. Photobiol.
, vol.49
, pp. 753-761
-
-
Siebzehnrübl, S.1
Fischer, S.F.2
Kufer, W.3
Scheer, H.4
-
8
-
-
0002531047
-
Studies on chromophore coupling in isolated phycobiliproteins. 4. Femtosecond transient absorption study of ultrafast excited state dynamics in trimeric phycoerythrocyanin complexes
-
M. Hucke, G. Schweitzer, A.R. Holzwarth, W. Sidler, and H. Zuber Studies on chromophore coupling in isolated phycobiliproteins. 4. Femtosecond transient absorption study of ultrafast excited state dynamics in trimeric phycoerythrocyanin complexes Photochem. Photobiol. 57 1993 76 80
-
(1993)
Photochem. Photobiol.
, vol.57
, pp. 76-80
-
-
Hucke, M.1
Schweitzer, G.2
Holzwarth, A.R.3
Sidler, W.4
Zuber, H.5
-
9
-
-
0024528771
-
Time-resolved macromolecular crystallography
-
K. Moffat Time-resolved macromolecular crystallography Annu. Rev. Biophys. Chem. 18 1989 309 332
-
(1989)
Annu. Rev. Biophys. Chem.
, vol.18
, pp. 309-332
-
-
Moffat, K.1
-
10
-
-
0037342350
-
The application of the singular value decomposition to time-resolved X-ray data
-
M. Schmidt, S. Rajagopal, Z. Ren, and K. Moffat The application of the singular value decomposition to time-resolved X-ray data Biophys. J. 84 2003 2112 2129
-
(2003)
Biophys. J.
, vol.84
, pp. 2112-2129
-
-
Schmidt, M.1
Rajagopal, S.2
Ren, Z.3
Moffat, K.4
-
11
-
-
1842738214
-
Protein kinetics: Structures of intermediates and reaction mechanism from time-resolved X-ray data
-
M. Schmidt, R. Pahl, V. Srajer, S. Anderson, Z. Ren, H. Ihee, S. Rajagopal, and K. Moffat Protein kinetics: structures of intermediates and reaction mechanism from time-resolved X-ray data Proc. Natl. Acad. Sci. U. S. A. 101 2004 4799 4804
-
(2004)
Proc. Natl. Acad. Sci. U. S. A.
, vol.101
, pp. 4799-4804
-
-
Schmidt, M.1
Pahl, R.2
Srajer, V.3
Anderson, S.4
Ren, Z.5
Ihee, H.6
Rajagopal, S.7
Moffat, K.8
-
13
-
-
0027466720
-
Molecular assembly of the phycobilisomes from the cyanobacterium Mastigocladus laminosus
-
W. Reuter, and C. Nickel-Reuter Molecular assembly of the phycobilisomes from the cyanobacterium Mastigocladus laminosus J. Photochem. Photobiol., B Biol. 18 1993 51 66
-
(1993)
J. Photochem. Photobiol., B Biol.
, vol.18
, pp. 51-66
-
-
Reuter, W.1
Nickel-Reuter, C.2
-
14
-
-
0036411681
-
Purification, crystallization, NMR spectroscopy and biochemical analyses of alpha-phycoerythrocyanin peptides
-
G. Wiegand, A. Parbel, M.H. Seifert, T.A. Holak, and W. Reuter Purification, crystallization, NMR spectroscopy and biochemical analyses of alpha-phycoerythrocyanin peptides Eur. J. Biochem. 269 2002 5046 5055
-
(2002)
Eur. J. Biochem.
, vol.269
, pp. 5046-5055
-
-
Wiegand, G.1
Parbel, A.2
Seifert, M.H.3
Holak, T.A.4
Reuter, W.5
-
15
-
-
0022419585
-
Crystallization of phycoerythrocyanin from the cyanobacterium Mastigocladus laminosus and preliminary characterization of two crystal forms
-
R. Ruembeli, T. Schirmer, W. Bode, W. Sidler, and H. Zuber Crystallization of phycoerythrocyanin from the cyanobacterium Mastigocladus laminosus and preliminary characterization of two crystal forms J. Mol. Biol. 186 1985 197 200
-
(1985)
J. Mol. Biol.
, vol.186
, pp. 197-200
-
-
Ruembeli, R.1
Schirmer, T.2
Bode, W.3
Sidler, W.4
Zuber, H.5
-
16
-
-
0000499436
-
Quantitative analysis of synchrotron Laue diffraction patterns in macromolecular crystallography
-
Z. Ren, and K. Moffat Quantitative analysis of synchrotron Laue diffraction patterns in macromolecular crystallography J. Appl. Cryst. 28 1995 461 481
-
(1995)
J. Appl. Cryst.
, vol.28
, pp. 461-481
-
-
Ren, Z.1
Moffat, K.2
-
17
-
-
0028103275
-
Number 4, "the CCP4 Suite: Programs for protein crystallography"
-
Collaborative Computational Project
-
Collaborative Computational Project Number 4, "The CCP4 Suite: programs for protein crystallography" Acta Cryst. D50 1994 760 763
-
(1994)
Acta Cryst.
, vol.50
, pp. 760-763
-
-
-
18
-
-
0032790081
-
XtalView/Xfit-A versatile program for manipulating atomic coordinates and electron density
-
D.E. McRee XtalView/Xfit-A versatile program for manipulating atomic coordinates and electron density J. Struct. Biol. 125 1999 156 165
-
(1999)
J. Struct. Biol.
, vol.125
, pp. 156-165
-
-
McRee, D.E.1
-
19
-
-
3543012707
-
Crystallography and NMR system: A new software suite for macromolecular structure determination
-
A.T. Brunger, P.D. Adams, G.M. Clore, W.L. DeLano, P. Gros, R.W. Grosse-Kunstleve, J.S. Jiang, J. Kuszewski, M. Nilges, N.S. Pannu, R.J. Read, L.M. Rice, T. Simonson, and G.L. Warren Crystallography and NMR system: a new software suite for macromolecular structure determination Acta Crystallogr., D 54 1998 905 921
-
(1998)
Acta Crystallogr., D
, vol.54
, pp. 905-921
-
-
Brunger, A.T.1
Adams, P.D.2
Clore, G.M.3
Delano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
Read, R.J.11
Rice, L.M.12
Simonson, T.13
Warren, G.L.14
-
20
-
-
0031041573
-
Z, e isomerization of the α-84 phycoviolobilin chromophore of phycoerythrocyanin from Mastigocladus laminosus investigated by Fourier-transform infrared difference spectroscopy
-
H. Foerstendorf, A. Parbel, H. Scheer, and F. Siebert Z, E isomerization of the α-84 phycoviolobilin chromophore of phycoerythrocyanin from Mastigocladus laminosus investigated by Fourier-transform infrared difference spectroscopy FEBS Lett. 402 1997 172 176
-
(1997)
FEBS Lett.
, vol.402
, pp. 172-176
-
-
Foerstendorf, H.1
Parbel, A.2
Scheer, H.3
Siebert, F.4
-
21
-
-
11844294715
-
A structural pathway for signaling in the E46Q mutant for photoactive yellow protein
-
S. Rajagopal, S. Anderson, V. Srajer, M. Schmidt, R. Pahl, and K. Moffat A structural pathway for signaling in the E46Q mutant for photoactive yellow protein Structure 13 2005 55 63
-
(2005)
Structure
, vol.13
, pp. 55-63
-
-
Rajagopal, S.1
Anderson, S.2
Srajer, V.3
Schmidt, M.4
Pahl, R.5
Moffat, K.6
-
22
-
-
21044432995
-
Visualizing chromophore isomerization in photoactive yellow protein from nanoseconds to seconds by time-resolved crystallography
-
H. Ihee, S. Rajagopal, V. Srajer, R. Pahl, M. Schmidt, F. Schotte, P.A. Anfinrud, M. Wulff, and K. Moffat Visualizing chromophore isomerization in photoactive yellow protein from nanoseconds to seconds by time-resolved crystallography Proc. Natl. Acad. Sci. U. S. A. 2005 7145 7150
-
(2005)
Proc. Natl. Acad. Sci. U. S. A.
, pp. 7145-7150
-
-
Ihee, H.1
Rajagopal, S.2
Srajer, V.3
Pahl, R.4
Schmidt, M.5
Schotte, F.6
Anfinrud, P.A.7
Wulff, M.8
Moffat, K.9
-
23
-
-
0025048527
-
Genes encoding both subunits of phycoerythrocyanin, a light harvesting biliprotein from the cyanobacterium Mastigocladus laminosus
-
M. Eberlein, and W. Kufer Genes encoding both subunits of phycoerythrocyanin, a light harvesting biliprotein from the cyanobacterium Mastigocladus laminosus Gene 94 1990 133 136
-
(1990)
Gene
, vol.94
, pp. 133-136
-
-
Eberlein, M.1
Kufer, W.2
-
24
-
-
0032077164
-
Structure refinement against synchrotron Laue data: Strategies for data collection and reduction
-
X. Yang, Z. Ren, and K. Moffat Structure refinement against synchrotron Laue data: strategies for data collection and reduction Acta Crystallogr., D 54 1998 367 377
-
(1998)
Acta Crystallogr., D
, vol.54
, pp. 367-377
-
-
Yang, X.1
Ren, Z.2
Moffat, K.3
-
25
-
-
0001546886
-
Improved estimation of structure factor difference amplitudes from poorly accurate data
-
T. Ursby, and D. Bourgeois Improved estimation of structure factor difference amplitudes from poorly accurate data Acta Crystallogr., A 53 1998 564 575
-
(1998)
Acta Crystallogr., a
, vol.53
, pp. 564-575
-
-
Ursby, T.1
Bourgeois, D.2
-
26
-
-
0033439362
-
Laue crystallography: Coming of age
-
Z. Ren, D. Bourgeois, J.R. Helliwell, K. Moffat, V. Srajer, and B.L. Stoddard Laue crystallography: coming of age J. Synchrotron Radiat. 6 1999 891 917
-
(1999)
J. Synchrotron Radiat.
, vol.6
, pp. 891-917
-
-
Ren, Z.1
Bourgeois, D.2
Helliwell, J.R.3
Moffat, K.4
Srajer, V.5
Stoddard, B.L.6
-
27
-
-
0035923399
-
Molecular movie from nanosecond to second time scales at 1.8 Å resolution displays the photocycle of photoactive yellow protein, an eubacterial blue-light receptor
-
Z. Ren, B. Perman, V. Srajer, T.-Y. Teng, C. Pradervand, D. Bourgeois, F. Schotte, T. Ursby, R. Kort, M. Wulff, and K. Moffat Molecular movie from nanosecond to second time scales at 1.8 Å resolution displays the photocycle of photoactive yellow protein, an eubacterial blue-light receptor Biochemistry 40 2001 13788 13801
-
(2001)
Biochemistry
, vol.40
, pp. 13788-13801
-
-
Ren, Z.1
Perman, B.2
Srajer, V.3
Teng, T.-Y.4
Pradervand, C.5
Bourgeois, D.6
Schotte, F.7
Ursby, T.8
Kort, R.9
Wulff, M.10
Moffat, K.11
-
28
-
-
0038047431
-
Watching a protein as it functions with 150 ps time-resolved X-ray crystallography
-
F. Schotte, M. Lim, T.A. Jackson, A.V. Smirnov, J. Soman, J.S. Olson, G.N.J. Phillips, M. Wulff, and P. Anfinrud Watching a protein as it functions with 150 ps time-resolved X-ray crystallography Science 300 2003 1944 1947
-
(2003)
Science
, vol.300
, pp. 1944-1947
-
-
Schotte, F.1
Lim, M.2
Jackson, T.A.3
Smirnov, A.V.4
Soman, J.5
Olson, J.S.6
Phillips, G.N.J.7
Wulff, M.8
Anfinrud, P.9
-
29
-
-
21344432764
-
Protein ligand interaction probed by time-resolved X-ray structure determination
-
G.U. Nienhaus Methods in Molecular Biology Humana Press Totowa, NJ
-
M. Schmidt, R. Pahl, H. Ihee, and V. Srajer Protein ligand interaction probed by time-resolved X-ray structure determination G.U. Nienhaus Methods in Molecular Biology Protein-Ligand Interactions: Methods and Applications vol. 305 2005 Humana Press Totowa, NJ 115 154
-
(2005)
Protein-Ligand Interactions: Methods and Applications
, vol.305
, pp. 115-154
-
-
Schmidt, M.1
Pahl, R.2
Ihee, H.3
Srajer, V.4
-
31
-
-
0036616218
-
The Protein Data Bank
-
H.M. Berman, T. Battistuz, T.N. Bhat, W.F. Bluhm, P.E. Bourne, K. Burkhardt, Z. Feng, G.L. Gilliland, L. Iype, S. Jain, P. Fagan, J. Marvin, D. Padilla, V. Ravichandran, B. Schneider, N. Thanki, H. Weissig, J.D. Westbrook, and C. Zardecki The Protein Data Bank Acta Crystallogr., D 58 2002 899 907
-
(2002)
Acta Crystallogr., D
, vol.58
, pp. 899-907
-
-
Berman, H.M.1
Battistuz, T.2
Bhat, T.N.3
Bluhm, W.F.4
Bourne, P.E.5
Burkhardt, K.6
Feng, Z.7
Gilliland, G.L.8
Iype, L.9
Jain, S.10
Fagan, P.11
Marvin, J.12
Padilla, D.13
Ravichandran, V.14
Schneider, B.15
Thanki, N.16
Weissig, H.17
Westbrook, J.D.18
Zardecki, C.19
-
32
-
-
84986512474
-
CHARMM: A program for macromolecular energy, minimization, and dynamics calculations
-
B.R. Brooks, R.E. Bruccoleri, B.D. Olafson, D.J. States, S. Swaminathan, and M. Karplus CHARMM: a program for macromolecular energy, minimization, and dynamics calculations J. Comp. Chem. 4 1983 187 217
-
(1983)
J. Comp. Chem.
, vol.4
, pp. 187-217
-
-
Brooks, B.R.1
Bruccoleri, R.E.2
Olafson, B.D.3
States, D.J.4
Swaminathan, S.5
Karplus, M.6
-
33
-
-
0022429470
-
X-ray crystallographic structure of the light-harvesting biliprotein C-phycocyanin from the thermophilic cyanobacterium Mastigocladus laminosus and its resemblance to globin structure
-
T. Schirmer, W. Bode, R. Huber, W. Sidler, and H. Zuber X-ray crystallographic structure of the light-harvesting biliprotein C-phycocyanin from the thermophilic cyanobacterium Mastigocladus laminosus and its resemblance to globin structure J. Mol. Biol. 184 1985 257 277
-
(1985)
J. Mol. Biol.
, vol.184
, pp. 257-277
-
-
Schirmer, T.1
Bode, W.2
Huber, R.3
Sidler, W.4
Zuber, H.5
-
34
-
-
0028936568
-
Type I reversible photochemistry of phycoerythrocyanin involves Z/E-isomerization of α-84-phycoviolobilin chromophore
-
K.H. Zhao, R. Haessner, E. Cmiel, and H. Scheer Type I reversible photochemistry of phycoerythrocyanin involves Z/E-isomerization of α-84-phycoviolobilin chromophore BBA 1228 1995 235 243
-
(1995)
BBA
, vol.1228
, pp. 235-243
-
-
Zhao, K.H.1
Haessner, R.2
Cmiel, E.3
Scheer, H.4
-
35
-
-
0033573901
-
Structural analysis at 2.2Å of orthorhombic crystals present the asymmetry of the allophycocyanin-linker complex, AP•LC7.8, from phycobilisomes of Mastigocladus laminosus
-
W. Reuter, G. Wiegand, R. Huber, and M.E. Than Structural analysis at 2.2Å of orthorhombic crystals present the asymmetry of the allophycocyanin-linker complex, AP•LC7.8, from phycobilisomes of Mastigocladus laminosus Proc. Natl. Acad. Sci. U. S. A. 96 1999 1363 1368
-
(1999)
Proc. Natl. Acad. Sci. U. S. A.
, vol.96
, pp. 1363-1368
-
-
Reuter, W.1
Wiegand, G.2
Huber, R.3
Than, M.E.4
-
36
-
-
84989691690
-
Reversible photochemistry in the α-subunit of phycoerythrocyanin: Characterization of chromophore and protein by molecular dynamics and quantum chemical calculations
-
C. Scharnagel, and S.F. Fischer Reversible photochemistry in the α-subunit of phycoerythrocyanin: characterization of chromophore and protein by molecular dynamics and quantum chemical calculations Photochem. Photobiol. 57 1993 63 70
-
(1993)
Photochem. Photobiol.
, vol.57
, pp. 63-70
-
-
Scharnagel, C.1
Fischer, S.F.2
-
37
-
-
0347364621
-
Protein flexibility and intrinsic disorder
-
P. Radivojac, Z. Obradovic, D.K. Smith, G. Zhu, S. Vucetic, C. Brown, J.D. Lawson, and A.K. Dunker Protein flexibility and intrinsic disorder Protein Sci. 13 2004 71 80
-
(2004)
Protein Sci.
, vol.13
, pp. 71-80
-
-
Radivojac, P.1
Obradovic, Z.2
Smith, D.K.3
Zhu, G.4
Vucetic, S.5
Brown, C.6
Lawson, J.D.7
Dunker, A.K.8
-
38
-
-
0038168403
-
The crystal structure of a novel unmethylated form of C-phycocyanin, a possible connector between cores and rods in phycobilisomes
-
N. Adir, and N. Lerner The crystal structure of a novel unmethylated form of C-phycocyanin, a possible connector between cores and rods in phycobilisomes J. Biol. Chem. 278 2003 25926 25932
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 25926-25932
-
-
Adir, N.1
Lerner, N.2
-
39
-
-
84889120137
-
Improved methods for building protein models in electron density maps and the location of errors in these models
-
T.A Jones, J.Y. Zou, S.V. Cowan, and M. Kjeldgaard Improved methods for building protein models in electron density maps and the location of errors in these models Acta Crystallogr., A 47 1991 110 119
-
(1991)
Acta Crystallogr., a
, vol.47
, pp. 110-119
-
-
Jones, T.A.1
Zou, J.Y.2
Cowan, S.V.3
Kjeldgaard, M.4
-
40
-
-
0031473847
-
Swiss-model and the Swiss-PdbViewer: An environment for comparative protein modeling
-
N. Guex, and M.C. Peitsch Swiss-model and the Swiss-PdbViewer: an environment for comparative protein modeling Electrophoresis 18 1997 2714 2723
-
(1997)
Electrophoresis
, vol.18
, pp. 2714-2723
-
-
Guex, N.1
Peitsch, M.C.2
|