Phylogenetic position of Petrospongium rugosum (Ectocarpales, Phaeophyceae): Insights from the protein-coding plastid rbcL and psaA gene sequences

Cryptogamie, Algologie

Volumn 27, Issue 1, 2006, Pages 3-15

  Cho, Ga Youn ^a   Boo, Sung Min ^a  

^a Chungnam National University   (South Korea)

Author keywords

Brown algae; Molecular phylogeny; Petrospongium rugosum; psaA; Pyrenoid; rbcL; Taxonomy; Ultrastructure

Indexed keywords

BROWN ALGA; MOLECULAR ANALYSIS; PHYLOGENETICS; TAXONOMY;

ASIA; AUSTRALASIA; AUSTRALIA; EURASIA; FAR EAST; JAPAN; KOREA; NEW ZEALAND; NORTH AMERICA; PACIFIC COAST [NORTH AMERICA];

ALGAE; CHORDARIACEAE; CHORDARIALES; CYLINDROCARPUS RUGOSUM; DISCOIDAE; ECTOCARPALES; ECTOCARPUS; LEATHESIA; LEATHESIA DIFFORMIS; PHAEOPHYCEAE; SPERMATOCHNUS PARADOXUS;

EID: 33644621308     PISSN: 01811568     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (31)

1. ADAMS N.M., 1994 - Seaweeds of New Zealand: An illustrated guide. Christchurch, New Zealand, Canterbury University Press, 360 p
2. CHO T.O., CHO G.Y., YOON H.S., BOO S.M. & LEE W.J., 2003 - New records of Myelophycus cavus (Scytosiphonaceae, Phaeophyceae) in Korea and the taxonomic position of the genus on the basis of a plastid DNA phylogeny. Nova Hedwigia 76: 381-397.
3. CHO G.Y., LEE S. H. & BOO S.M., 2004 - A new brown algal order, Ishigeales (Phaeophyceae), established on the basis of plastid protein-coding rbcL, psaA, and psbA region comparisons. Journal of phycology 40: 921-936.
4. DRAISMA S.G.A., PRUD'HOMME van REINE W.F., STAM W.T. & OLSEN J.L., 2001 - A reassessment of phylogenetic relationships within the Phaeophyceae based on RUBISCO large subunit and ribosomal DNA sequences. Journal of phycology 37: 586-603.
5. DRAISMA S.G.A., PETERS A.F. & FLETCHER R.L., 2003 - Evolution and taxonomy in the Phaeophyceae: effects of the molecular age on brown algal systematics. In: Norton T.A. (ed.). Out of the Past: Collected Reviews to Celebrate the Jubilee of the British Phycological Society. Belfast, UK, British Phycological Society, pp. 87-102.
6. GILBERT D.G., 1995 - SeqPup, a Biological Sequence Editor and Analysis Program for Macintosh Computers. Biology Department, Indiana University, Bloomington, USA.
7. HORI T., 1971 - Survey of pyrenoid distribution in brown algae. Botanical magazine, Tokyo 84: 231-242.
8. HORI T., 1993 - An Illustrated Atlas of the Life History of Algae. Vol. 2. Brown and Red Algae. Tokyo, Uchida Rokakuho Publication, 345 p.
9. HUELSENBECK J.P. & RONQUIST F., 2001 - MRBAYES: Bayesian inference of phylogeny. Bioinformatics 17: 754-755.
10. INAGAKI K., 1958 - A systematic study of the order Chordariales from Japan and its vicinity. Scientific paper of Institute algological research, Hokkaido University 4: 87-197.
11. KANG J.W., 1966 - On the geographical distribution of marine algae in Korea. Bulletin of Pusan fishery college 7: 1-125.
12. KOGAME K., HORIGUCHI T. & MASUDA M., 1999 - Phylogeny of the order Scytosiphonales (Phaeophyceae) based on DNA sequences of rbcL, partial rbcS, and partial LSU nrDNA. Phycologia 38: 496-502.
13. KÜTZING F.T., 1858 - Tabulae Phycologicae oder Abbildungen der Tange. Vol. 8. Nordhausen, Germany, Fr. Eberhardt, 48 p.
14. MACLENNAN I.G., 1956 - A brown alga (Petrospongium rugosum) new to Victoria. Proceedings of the royal society of Victoria 69: 1-3.
15. OKAMURA K., 1903 - Contents of the "Algae Japonicae Exsiccatae" Fasciculus II. Botanical magazine, Tokyo 17: 129-132.
16. OKAMURA K., 1907 - Icones of Japanese Algae. Vol. I. Tokyo, Kazamashobo, 258 p.
17. OLTMANNS F., 1922 - Morphologie und Biologie der Algen. Bd. 1. Jena, Germany, Gustav Fischer, 439 p.
18. PETERS A.F. & RAMÍREZ M.E., 2001 - Molecular phylogeny of small brown algae, with special reference to the systematic position of Caepidium antarcticum (Adenocystaceae, Ectocarpales). Cryptogamie, Algologie 22: 187-200.
19. POSADA D. & CRANDALL K.A., 1998 - Modeltest: Testing the model of DNA substitution. Bioinformatics 14: 817-818.
20. REVIERS B. de & ROUSSEAU F., 1999 - Towards a new classification of the brown algae. Progress in phycological research 13: 107-201.
21. REYNOLDS E.S., 1963 - The use of lead citrate at high pH as an electron-opaque stain in electron microscopy. Journal of cell biology 17: 208-212.
22. ROUSSEAU F. & REVIERS B. de, 1999 - Circumscription of the order Ectocarpales (Phaeophyceae): Bibliographical synthesis and molecular evidence. Cryptogamie, Algologie 20: 5-18.
23. ROUSSEAU F., REVIERS B. de, LECLERC M.-C. ASENSI A. & DELÉPINE D., 2000 - Adenocystaceae fam. nov. (Phaeophyceae), a new family based on morphological and molecular evidence. European journal of phycology 35: 35-40.
24. ROUSSEAU F., BURROWES R., PETERS A.F., KUHLENKAMP R. & REVIERS B. de, 2001 - A comprehensive phylogeny of the Phaeophyceae based on nrDNA sequences resolves the earliest divergences. Compte rendus de l'académie des sciences 324: 305-319.
25. SETCHELL W.A. & GARDNER N.L., 1924 - New marine algae from the Gulf of California. Proceedings of the California academy of sciences 12: 659-949.
26. SIEMER B.L., STAM W.T., OLSEN J.L. & PEDERSEN P.M., 1998 - Phylogenetic relationships of the brown algal orders Ectocarpales, Chordariales, Dictyosiphonales, and Tilopteridales (Phaeophyceae) based on rubisco large subunit and spacer sequences. Journal of phycology 34: 1038-1048.
27. SPURR A.R., 1969 - A low-viscosity epoxy resin-embedding medium for electron microscopy. Journal of ultrastructural research 26: 31-43.
28. SWOFFORD D.L., 2002 - PAUP*. Phylogenetic Analysis Using Parsimony (* And Other Methods). Version 4.0b8. Sinauer, Sunderland, MA.
29. YOON H.S. & BOO S.M., 1999 - Phylogeny of Alariaceae (Phaeophyta) within the special reference to Undaria based on sequences of the RuBisCO spacer region. Hydrobiologia 398/399: 47-55.
30. YOON H.S., HACKETT J.D. & BHATTACHARYA D. 2002 - A single origin of the peridinin- and fucoxanthin-containing plastids in dinoflagellates through tertiary endosymbiosis. Proceedings of the national academy of sciences of the United States of America 99: 11724-11729.
31. WOMERSLEY H.B.S., 1987 - The Marine Benthic Flora of Southern Australia. Part II. Adelaide, South Australia Government, 484 p.