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Volumn 6, Issue 2, 2006, Pages 90-103

Macro- and microcolinearity between the genomic region of wheat chromosome 5B containing the Tsn1 gene and the rice genome

Author keywords

Colinearity; Comparative genomics; Rice; Wheat

Indexed keywords

PLANT TOXIN; PROTEIN TSN1; UNCLASSIFIED DRUG; VEGETABLE PROTEIN;

EID: 33644515305     PISSN: 1438793X     EISSN: 14387948     Source Type: Journal    
DOI: 10.1007/s10142-005-0020-1     Document Type: Article
Times cited : (40)

References (56)
  • 1
    • 0027135403 scopus 로고
    • Homoeologous relationships of rice, wheat and maize chromosomes
    • Ahn S, Anderson JA, Sorrells ME, Tanksley SD (1993) Homoeologous relationships of rice, wheat and maize chromosomes. Mol Gen Genet 241:483-490
    • (1993) Mol Gen Genet , vol.241 , pp. 483-490
    • Ahn, S.1    Anderson, J.A.2    Sorrells, M.E.3    Tanksley, S.D.4
  • 5
    • 0028873712 scopus 로고
    • Nuclear DNA amounts in angiosperms
    • Bennett MD, Leitch IJ (1995) Nuclear DNA amounts in angiosperms. Ann Bot 76:113-176
    • (1995) Ann Bot , vol.76 , pp. 113-176
    • Bennett, M.D.1    Leitch, I.J.2
  • 6
    • 0033869323 scopus 로고    scopus 로고
    • Comparative sequence analysis of plant nuclear genomes: Microcolinearity and its many exceptions
    • Bennetzen JL (2000) Comparative sequence analysis of plant nuclear genomes: Microcolinearity and its many exceptions. Plant Cell 12:1021-1029
    • (2000) Plant Cell , vol.12 , pp. 1021-1029
    • Bennetzen, J.L.1
  • 7
    • 0036010794 scopus 로고    scopus 로고
    • Numerous small rearrangements of gene content, order and orientation differentiate grass genomes
    • Bennetzen JL, Ramakrishna W (2002) Numerous small rearrangements of gene content, order and orientation differentiate grass genomes. Plant Mol Biol 48:821-827
    • (2002) Plant Mol Biol , vol.48 , pp. 821-827
    • Bennetzen, J.L.1    Ramakrishna, W.2
  • 8
    • 3042623788 scopus 로고    scopus 로고
    • Sequencing of the Triticum monococcum hardness locus reveals good microcolinearity with rice
    • Chantret N, Cenci A, Sabot F, Anderson O, Dubcovsky J (2004) Sequencing of the Triticum monococcum hardness locus reveals good microcolinearity with rice. Mol Genet Genomics 271:377-386
    • (2004) Mol Genet Genomics , vol.271 , pp. 377-386
    • Chantret, N.1    Cenci, A.2    Sabot, F.3    Anderson, O.4    Dubcovsky, J.5
  • 13
    • 0034087970 scopus 로고    scopus 로고
    • Genome relationships: The grass model in current research
    • Devos KM, Gale MD (2000) Genome relationships: The grass model in current research. Plant Cell 12:637-646
    • (2000) Plant Cell , vol.12 , pp. 637-646
    • Devos, K.M.1    Gale, M.D.2
  • 14
    • 6944228177 scopus 로고    scopus 로고
    • Microcolinearity between a 2-cM region encompassing the grain protein content locus Gpc-6B1 on wheat chromosome 6B and a 350-kb region on rice chromosome 2
    • Distelfeld A, Uauy C, Olmos S, Schlatter AR, Dubcovsky J, Fahima T (2004) Microcolinearity between a 2-cM region encompassing the grain protein content locus Gpc-6B1 on wheat chromosome 6B and a 350-kb region on rice chromosome 2. Funct Integr Genomics 4:59-66
    • (2004) Funct Integr Genomics , vol.4 , pp. 59-66
    • Distelfeld, A.1    Uauy, C.2    Olmos, S.3    Schlatter, A.R.4    Dubcovsky, J.5    Fahima, T.6
  • 17
    • 0029837287 scopus 로고    scopus 로고
    • The deletion stocks of common wheat
    • Endo TR, Gill BS (1996) The deletion stocks of common wheat. J Hered 87:295-307
    • (1996) J Hered , vol.87 , pp. 295-307
    • Endo, T.R.1    Gill, B.S.2
  • 19
    • 0000291350 scopus 로고    scopus 로고
    • Chromosomal location of a gene conditioning insensitivity in wheat to a necrosis-inducing culture filtrate from Pyrenophora tritici-repentis
    • Faris JD, Anderson JA, Francl LJ, Jordahl JG (1996) Chromosomal location of a gene conditioning insensitivity in wheat to a necrosis-inducing culture filtrate from Pyrenophora tritici-repentis. Phytopathology 86:459-463
    • (1996) Phytopathology , vol.86 , pp. 459-463
    • Faris, J.D.1    Anderson, J.A.2    Francl, L.J.3    Jordahl, J.G.4
  • 20
    • 0033977072 scopus 로고    scopus 로고
    • Saturation mapping of a gene-rich recombination hot spot region in wheat
    • Faris JD, Haen KM, Gill BS (2000) Saturation mapping of a gene-rich recombination hot spot region in wheat. Genetics 154:823-835
    • (2000) Genetics , vol.154 , pp. 823-835
    • Faris, J.D.1    Haen, K.M.2    Gill, B.S.3
  • 21
    • 0038192138 scopus 로고    scopus 로고
    • A bacterial artificial chromosome contig spanning the major domestication locus Q in wheat and identification of a candidate gene
    • Faris JD, Fellers JP, Brooks SA and Gill BS (2003) A bacterial artificial chromosome contig spanning the major domestication locus Q in wheat and identification of a candidate gene. Genetics 164:311-321
    • (2003) Genetics , vol.164 , pp. 311-321
    • Faris, J.D.1    Fellers, J.P.2    Brooks, S.A.3    Gill, B.S.4
  • 22
    • 0033529227 scopus 로고    scopus 로고
    • High gene density is conserved at syntenic loci of small and large grass genomes
    • Feuillet C, Keller B (1999) High gene density is conserved at syntenic loci of small and large grass genomes. Proc Natl Acad Sci U S A 96:8265-8270
    • (1999) Proc Natl Acad Sci U S A , vol.96 , pp. 8265-8270
    • Feuillet, C.1    Keller, B.2
  • 23
    • 0036043201 scopus 로고    scopus 로고
    • Comparative genomics in the grass family: Molecular characterization of grass genome structure and evolution
    • Feuillet C, Keller B (2002) Comparative genomics in the grass family: molecular characterization of grass genome structure and evolution. Ann Bot 89:3-10
    • (2002) Ann Bot , vol.89 , pp. 3-10
    • Feuillet, C.1    Keller, B.2
  • 24
    • 6944234051 scopus 로고    scopus 로고
    • Construction and analysis of a BAC library in the grass Brachypodium sylvaticum: Its use as a tool to bridge the gap between rice and wheat in elucidating gene content
    • Foote T, Griffiths S, Allouis S, Moore G (2004) Construction and analysis of a BAC library in the grass Brachypodium sylvaticum: Its use as a tool to bridge the gap between rice and wheat in elucidating gene content. Funct Integr Genomics 4:26-33
    • (2004) Funct Integr Genomics , vol.4 , pp. 26-33
    • Foote, T.1    Griffiths, S.2    Allouis, S.3    Moore, G.4
  • 25
    • 13244260639 scopus 로고    scopus 로고
    • Comparative organization of wheat homoeologous group 3S and 7L using wheat-rice synteny and identification of potential markers for genes controlling xanthophylls content in wheat
    • Francki M, Carter M, Byan K, Hunter A, Bellgard M, Appels R (2004) Comparative organization of wheat homoeologous group 3S and 7L using wheat-rice synteny and identification of potential markers for genes controlling xanthophylls content in wheat. Funct Integr Genomics 4:118-130
    • (2004) Funct Integr Genomics , vol.4 , pp. 118-130
    • Francki, M.1    Carter, M.2    Byan, K.3    Hunter, A.4    Bellgard, M.5    Appels, R.6
  • 26
    • 0027313373 scopus 로고
    • A chromosome region-specific mapping strategy reveals gene-rich telomeric ends in wheat
    • Gill KS, Gill BS, Endo TR (1993) A chromosome region-specific mapping strategy reveals gene-rich telomeric ends in wheat. Chromosoma 102:374-381
    • (1993) Chromosoma , vol.102 , pp. 374-381
    • Gill, K.S.1    Gill, B.S.2    Endo, T.R.3
  • 27
    • 0030030450 scopus 로고    scopus 로고
    • Identification and high-density mapping of gene-rich regions in chromosome group 5 of wheat
    • Gill KS, Gill BS, Endo T, Boyko EV (1996a) Identification and high-density mapping of gene-rich regions in chromosome group 5 of wheat. Genetics 143:1001-1012
    • (1996) Genetics , vol.143 , pp. 1001-1012
    • Gill, K.S.1    Gill, B.S.2    Endo, T.3    Boyko, E.V.4
  • 28
    • 0030467769 scopus 로고    scopus 로고
    • Identification and high-density mapping of gene-rich regions in chromosome group 1 of wheat
    • Gill KS, Gill BS, Endo TR, Taylor T (1996b) Identification and high-density mapping of gene-rich regions in chromosome group 1 of wheat. Genetics 144:1883-1891
    • (1996) Genetics , vol.144 , pp. 1883-1891
    • Gill, K.S.1    Gill, B.S.2    Endo, T.R.3    Taylor, T.4
  • 29
    • 0037023349 scopus 로고    scopus 로고
    • A draft sequence of the rice genome (Oryza sativa L. ssp. japonica)
    • Goff SA, Ricke D, Lan TH et al (2002) A draft sequence of the rice genome (Oryza sativa L. ssp. japonica). Science 296:92-100
    • (2002) Science , vol.296 , pp. 92-100
    • Goff, S.A.1    Ricke, D.2    Lan, T.H.3
  • 30
    • 4143116005 scopus 로고    scopus 로고
    • In silico comparative analysis reveals mosaic conservation of genes within a novel collinear region in wheat chromosome 1AS and rice chromosome 5S
    • Guyot R, Yahiaoui N, Feuillet C, Keller B (2004) In silico comparative analysis reveals mosaic conservation of genes within a novel collinear region in wheat chromosome 1AS and rice chromosome 5S. Funct Integr Genomics 4:47-58
    • (2004) Funct Integr Genomics , vol.4 , pp. 47-58
    • Guyot, R.1    Yahiaoui, N.2    Feuillet, C.3    Keller, B.4
  • 31
    • 2442438841 scopus 로고    scopus 로고
    • Genomic targeting and high-resolution mapping of the Tsn1 gene in wheat
    • Haen KM, Lu H, Friesen TL, Faris JD (2004) Genomic targeting and high-resolution mapping of the Tsn1 gene in wheat. Crop Sci 44:951-962
    • (2004) Crop Sci , vol.44 , pp. 951-962
    • Haen, K.M.1    Lu, H.2    Friesen, T.L.3    Faris, J.D.4
  • 32
    • 0028173388 scopus 로고
    • Comparison of genetic and physical maps of group 7 chromosomes from Triticum aestivum L
    • Hohmann U, Endo TR, Gill KS, Gill BS (1994) Comparison of genetic and physical maps of group 7 chromosomes from Triticum aestivum L. Mol Gen Genet 245:644-653
    • (1994) Mol Gen Genet , vol.245 , pp. 644-653
    • Hohmann, U.1    Endo, T.R.2    Gill, K.S.3    Gill, B.S.4
  • 34
    • 84907150192 scopus 로고    scopus 로고
    • The map-based sequence of the rice genome
    • International Rice Genome Sequencing Project
    • International Rice Genome Sequencing Project (2005) The map-based sequence of the rice genome. Nature 436:793-800
    • (2005) Nature , vol.436 , pp. 793-800
  • 35
    • 4043105791 scopus 로고    scopus 로고
    • Comparative DNA sequence analysis of mapped wheat ESTs reveals the complexity of genome relationships between rice and wheat
    • La Rota M, Sorrells ME (2004) Comparative DNA sequence analysis of mapped wheat ESTs reveals the complexity of genome relationships between rice and wheat. Funct Integr Genomics 4:34-36
    • (2004) Funct Integr Genomics , vol.4 , pp. 34-36
    • La Rota, M.1    Sorrells, M.E.2
  • 36
    • 0036196695 scopus 로고    scopus 로고
    • The colinearity of the Sh2/A1 orthologous region in rice, sorghum and maize is interrupted and accompanied by genome expansion in the Triticeae
    • Li W, Gill BS (2002) The colinearity of the Sh2/A1 orthologous region in rice, sorghum and maize is interrupted and accompanied by genome expansion in the Triticeae. Genetics 160:1153-1162
    • (2002) Genetics , vol.160 , pp. 1153-1162
    • Li, W.1    Gill, B.S.2
  • 38
    • 0344064947 scopus 로고    scopus 로고
    • Targeted molecular mapping of a major wheat QTL for Fusarium head blight resistance using wheat ESTs and synteny with rice
    • Liu S, Anderson JA (2003) Targeted molecular mapping of a major wheat QTL for Fusarium head blight resistance using wheat ESTs and synteny with rice. Genome 46:817-823
    • (2003) Genome , vol.46 , pp. 817-823
    • Liu, S.1    Anderson, J.A.2
  • 39
    • 0000966410 scopus 로고
    • A cytogenetic ladder-map of wheat homoeologous group-4 chromosomes
    • Mickelson-Young L, Endo TR, Gill BS (1995) A cytogenetic ladder-map of wheat homoeologous group-4 chromosomes. Theor Appl Genet 90:1007-1011
    • (1995) Theor Appl Genet , vol.90 , pp. 1007-1011
    • Mickelson-Young, L.1    Endo, T.R.2    Gill, B.S.3
  • 42
    • 8544273197 scopus 로고    scopus 로고
    • A chromosome bin map of 16,000 expressed sequence tag loci and distribution of genes among the three genomes of polyploid wheat
    • Qi LL, Echalier B, Chao S, Lazo GR, Butler GE et al (2004) A chromosome bin map of 16,000 expressed sequence tag loci and distribution of genes among the three genomes of polyploid wheat. Genetics 168:701-712
    • (2004) Genetics , vol.168 , pp. 701-712
    • Qi, L.L.1    Echalier, B.2    Chao, S.3    Lazo, G.R.4    Butler, G.E.5
  • 45
    • 0002949863 scopus 로고
    • The aneuploids of common wheat
    • Sears ER (1954) The aneuploids of common wheat. MO Agr Exp Sta Res Bull 572:1-59
    • (1954) MO Agr Exp Sta Res Bull , vol.572 , pp. 1-59
    • Sears, E.R.1
  • 46
    • 0001833478 scopus 로고
    • Nullisomic-tetrasomic combinations in hexaploid wheat
    • Riley R, Lewis KR (eds) Oliver & Boyd, Edinburgh
    • Sears ER (1966) Nullisomic-tetrasomic combinations in hexaploid wheat. In: Riley R, Lewis KR (eds) Chromosome manipulations and plant genetics. Oliver & Boyd, Edinburgh, pp 29-45
    • (1966) Chromosome Manipulations and Plant Genetics , pp. 29-45
    • Sears, E.R.1
  • 47
    • 0001440778 scopus 로고
    • The telocentric chromosomes of common wheat
    • Ramanujan S (ed) Indian Society of Genetics and Plant Breeding, New Delhi, India
    • Sears ER, Sears LMS (1978) The telocentric chromosomes of common wheat. In: Ramanujan S (ed) Proceedings of the fifth international wheat genetics symposium. Indian Society of Genetics and Plant Breeding, New Delhi, India, pp 389-407
    • (1978) Proceedings of the Fifth International Wheat Genetics Symposium , pp. 389-407
    • Sears, E.R.1    Sears, L.M.S.2
  • 52
    • 0026468226 scopus 로고
    • Towards a cytogenetically based physical map of the wheat genome
    • Werner JE, Endo TR, Gill BS (1992) Towards a cytogenetically based physical map of the wheat genome. Proc Natl Acad Sci U S A 89:11307-11311
    • (1992) Proc Natl Acad Sci U S A , vol.89 , pp. 11307-11311
    • Werner, J.E.1    Endo, T.R.2    Gill, B.S.3
  • 53
    • 0034944487 scopus 로고    scopus 로고
    • Analysis of a contiguous 211 kb sequence in diploid wheat (Triticum monococcum L.) reveals multiple mechanisms of genome evolution
    • Wicker T, Stein N, Albar L, Feuillet C, Schlagenhauf E, Keller B (2001) Analysis of a contiguous 211 kb sequence in diploid wheat (Triticum monococcum L.) reveals multiple mechanisms of genome evolution. Plant J 26:307-316
    • (2001) Plant J , vol.26 , pp. 307-316
    • Wicker, T.1    Stein, N.2    Albar, L.3    Feuillet, C.4    Schlagenhauf, E.5    Keller, B.6
  • 56
    • 0037023384 scopus 로고    scopus 로고
    • A draft sequence of the rice genome (Oryza sativa L. ssp. indica)
    • Yu J, Hu SN, Wang J et al (2002) A draft sequence of the rice genome (Oryza sativa L. ssp. indica). Science 296:79-91
    • (2002) Science , vol.296 , pp. 79-91
    • Yu, J.1    Hu, S.N.2    Wang, J.3


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