-
2
-
-
0033954256
-
The Protein Data Bank
-
H.M. Berman, J. Westbrook, Z. Feng, G. Gilliland, T.N. Bhat, and H. Weissig The Protein Data Bank Nucleic Acids Res 28 2000 235 242
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
-
3
-
-
0027492268
-
The binding change mechanism for ATP synthase - Some probabilities and possibilities
-
P.D. Boyer The binding change mechanism for ATP synthase - some probabilities and possibilities Biochim Biophys Acta 1140 1993 215 250
-
(1993)
Biochim Biophys Acta
, vol.1140
, pp. 215-250
-
-
Boyer, P.D.1
-
4
-
-
0031008228
-
The ATP synthase - A splendid molecular machine
-
P.D. Boyer The ATP synthase - a splendid molecular machine Annu Rev Biochem 66 1997 717 749
-
(1997)
Annu Rev Biochem
, vol.66
, pp. 717-749
-
-
Boyer, P.D.1
-
5
-
-
37049161544
-
The energy and entropy of hydration of organic compounds
-
J.A.V. Butler The energy and entropy of hydration of organic compounds Trans Faraday Soc 33 1937 229 238
-
(1937)
Trans Faraday Soc
, vol.33
, pp. 229-238
-
-
Butler, J.A.V.1
-
7
-
-
0033607774
-
Molecular rotary motors
-
R.H. Fillingame Molecular rotary motors Science 286 1999 1687 1688
-
(1999)
Science
, vol.286
, pp. 1687-1688
-
-
Fillingame, R.H.1
-
8
-
-
0014931657
-
"squiggle-H2O". An enquiry into the importance of solvation effects in phosphate ester and anhydride reactions
-
P. George, R.J. Witonsky, M. Trachtman, C. Wu, W. Dorwart, and L. Richman "Squiggle-H2O". An enquiry into the importance of solvation effects in phosphate ester and anhydride reactions Biochim Biophys Acta 223 1970 1 15
-
(1970)
Biochim Biophys Acta
, vol.223
, pp. 1-15
-
-
George, P.1
Witonsky, R.J.2
Trachtman, M.3
Wu, C.4
Dorwart, W.5
Richman, L.6
-
9
-
-
0001656063
-
Theoretical calculations of the hydrolysis energies of some 'high energy' molecules. 2. a survey of some biologically important hydrolytic reactions
-
M.D. Hayes, L.G. Kenyon, and P.A. Kollman Theoretical calculations of the hydrolysis energies of some 'high energy' molecules. 2. A survey of some biologically important hydrolytic reactions J Chem Soc 100 1978 4331 4340
-
(1978)
J Chem Soc
, vol.100
, pp. 4331-4340
-
-
Hayes, M.D.1
Kenyon, L.G.2
Kollman, P.A.3
-
10
-
-
0036791006
-
Crystallographic findings on the internally uncoupled and near-rigor states of myosin: Further insights into the mechanics of the motor
-
D.M. Himmel, S. Gourinath, L. Reshetnikova, Y. Shen, A.G. Szent-Gyorgyi, and C. Cohen Crystallographic findings on the internally uncoupled and near-rigor states of myosin: Further insights into the mechanics of the motor Proc. Natl. Acad. Sci. USA 99 2002 12645 12650 Protein Data Bank, Structure Files 1KK7 and 1KK8
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 12645-12650
-
-
Himmel, D.M.1
Gourinath, S.2
Reshetnikova, L.3
Shen, Y.4
Szent-Gyorgyi, A.G.5
Cohen, C.6
-
13
-
-
0037022594
-
1 complex with its bound substrate cytochrome c
-
1 complex with its bound substrate cytochrome c Proc Natl Acad Sci USA 99 2002 2800 2805 Protein Data Bank, Structure File 1KYO
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 2800-2805
-
-
Lange, C.1
Hunter, C.2
-
15
-
-
0035838982
-
1-ATPase with nucleotide bound to all three catalytic sites: Implications for mechanism of rotary catalysis
-
1-ATPase with nucleotide bound to all three catalytic sites: Implications for mechanism of rotary catalysis Cell 106 2001 331 341 Protein Data Bank, Structure File 1H8E
-
(2001)
Cell
, vol.106
, pp. 331-341
-
-
Menz, R.I.1
Walker, J.E.2
Leslie, A.G.W.3
-
16
-
-
0018784261
-
Keilin's respiratory chain concept and its chemiosmotic consequences
-
P. Mitchell Keilin's respiratory chain concept and its chemiosmotic consequences Science 206 1979 1148 1159
-
(1979)
Science
, vol.206
, pp. 1148-1159
-
-
Mitchell, P.1
-
18
-
-
0026336267
-
Phosphorylation and dephosphorylation modulation of an inverse temperature transition
-
A. Pattanaik, D.C. Gowda, and D.W. Urry Phosphorylation and dephosphorylation modulation of an inverse temperature transition Biochem Biophys Res Commun 178 1991 539 545
-
(1991)
Biochem Biophys Res Commun
, vol.178
, pp. 539-545
-
-
Pattanaik, A.1
Gowda, D.C.2
Urry, D.W.3
-
20
-
-
0001728083
-
Partial resolution of the enzymes catalyzing oxidative phosphorylation. I. Purification and properties of soluble, dinitrophenol-stimulated adenosine triphosphatase
-
M.E. Pullman, H.S. Penefsky, A. Datta, and E. Racker Partial resolution of the enzymes catalyzing oxidative phosphorylation. I. Purification and properties of soluble, dinitrophenol-stimulated adenosine triphosphatase J Biol Chem 235 1960 3322 3329
-
(1960)
J Biol Chem
, vol.235
, pp. 3322-3329
-
-
Pullman, M.E.1
Penefsky, H.S.2
Datta, A.3
Racker, E.4
-
21
-
-
0017429047
-
Primary structure of porcine tropoelastin
-
L.B. Sandberg, W.R. Gray, J.A. Foster, A.R. Torres, V.L. Alvarez, and J. Janata Primary structure of porcine tropoelastin Adv Exp Med Biol 79 1977 277 284
-
(1977)
Adv Exp Med Biol
, vol.79
, pp. 277-284
-
-
Sandberg, L.B.1
Gray, W.R.2
Foster, J.A.3
Torres, A.R.4
Alvarez, V.L.5
Janata, J.6
-
23
-
-
0033607504
-
Molecular architecture of the rotary motor in ATP synthase
-
D. Stock, A.G.W. Leslie, and J.E. Walker Molecular architecture of the rotary motor in ATP synthase Science 286 1999 1700 1705 Protein Data Bank, Structure File 1QO1
-
(1999)
Science
, vol.286
, pp. 1700-1705
-
-
Stock, D.1
Leslie, A.G.W.2
Walker, J.E.3
-
24
-
-
0001554681
-
Hydrophobic protein at atomic resolution: Pentagonal rings of water molecules in crystals of Crambin
-
M.M. Teeter Hydrophobic protein at atomic resolution: Pentagonal rings of water molecules in crystals of Crambin Proc Natl Acad Sci USA 81 1984 6014 6018
-
(1984)
Proc Natl Acad Sci USA
, vol.81
, pp. 6014-6018
-
-
Teeter, M.M.1
-
25
-
-
0026468684
-
Free energy transduction in polypeptides and proteins based on inverse temperature transitions
-
D.W. Urry Free energy transduction in polypeptides and proteins based on inverse temperature transitions Prog Biophys Mol Biol 57 1992 23 57
-
(1992)
Prog Biophys Mol Biol
, vol.57
, pp. 23-57
-
-
Urry, D.W.1
-
26
-
-
0029110869
-
Elastic biomolecular machines: Synthetic chains of amino acids, patterned after those in connective tissue, can transform heat and chemical energy into motion
-
D.W. Urry Elastic biomolecular machines: Synthetic chains of amino acids, patterned after those in connective tissue, can transform heat and chemical energy into motion Sci Am January 1995 64 69
-
(1995)
Sci Am
, pp. 64-69
-
-
Urry, D.W.1
-
27
-
-
0038388786
-
Physical chemistry of biological free energy transduction as demonstrated by elastic protein-based polymers
-
D.W. Urry Physical chemistry of biological free energy transduction as demonstrated by elastic protein-based polymers J Phys Chem B 101 1997 11007 11028
-
(1997)
J Phys Chem B
, vol.101
, pp. 11007-11028
-
-
Urry, D.W.1
-
28
-
-
11144345726
-
The change in Gibbs free energy for hydrophobic association: Derivation and evaluation by means of inverse temperature transitions
-
D.W. Urry The change in Gibbs free energy for hydrophobic association: Derivation and evaluation by means of inverse temperature transitions Chem Phys Lett 399 2004 177 183
-
(2004)
Chem Phys Lett
, vol.399
, pp. 177-183
-
-
Urry, D.W.1
-
29
-
-
70449350250
-
Deciphering engineering principles for the design of protein-based nanomachines
-
V. Renugopalakrishnan R. Lewis P.K. Dhar Springer Netherlands
-
D.W. Urry Deciphering engineering principles for the design of protein-based nanomachines V. Renugopalakrishnan R. Lewis P.K. Dhar Protein-based nanotechnology 2005 Springer Netherlands p. 141-89, [chapter 9]
-
(2005)
Protein-based Nanotechnology
-
-
Urry, D.W.1
-
31
-
-
32844456764
-
Hydrophobic and elastic mechanisms in Complex III/Rieske Iron Protein (RIP), walking protein motors and protein-based materials
-
Shimohigashi Y, editor. Peptide science 2004, The Japanese Peptide Society; [ISSN-1344-7661].
-
Urry DW. Hydrophobic and elastic mechanisms in Complex III/Rieske Iron Protein (RIP), walking protein motors and protein-based materials. In: Shimohigashi Y, editor. Peptide science 2004, Proceedings of APIPS-JPS 2004; The Japanese Peptide Society; 2005b. p. 115-8. [ISSN-1344-7661].
-
(2005)
Proceedings of APIPS-JPS 2004
, pp. 115-118
-
-
Urry, D.W.1
-
32
-
-
0038245213
-
Mechanics of elastin: Molecular mechanism of biological elasticity and its relevance to contraction
-
D.W. Urry, and T.M. Parker Mechanics of elastin: Molecular mechanism of biological elasticity and its relevance to contraction J Muscle Res Cell Motil 23 2002 541 547
-
(2002)
J Muscle Res Cell Motil
, vol.23
, pp. 541-547
-
-
Urry, D.W.1
Parker, T.M.2
-
33
-
-
0017090360
-
Synthetic, cross-linked polypentapeptide of tropoelastin: An anisotropic, fibrillar elastomer
-
D.W. Urry, K. Okamoto, R.D. Harris, C.F. Hendrix, and M.M. Long Synthetic, cross-linked polypentapeptide of tropoelastin: An anisotropic, fibrillar elastomer Biochemistry 15 1976 4083 4089
-
(1976)
Biochemistry
, vol.15
, pp. 4083-4089
-
-
Urry, D.W.1
Okamoto, K.2
Harris, R.D.3
Hendrix, C.F.4
Long, M.M.5
-
35
-
-
0001486157
-
Mechanochemical coupling in synthetic polypeptides by modulation of an inverse temperature transition
-
D.W. Urry, B. Haynes, H. Zhang, R.D. Harris, and K.U. Prasad Mechanochemical coupling in synthetic polypeptides by modulation of an inverse temperature transition Proc Natl Acad Sci USA 85 1988 3407 3411
-
(1988)
Proc Natl Acad Sci USA
, vol.85
, pp. 3407-3411
-
-
Urry, D.W.1
Haynes, B.2
Zhang, H.3
Harris, R.D.4
Prasad, K.U.5
-
37
-
-
0028139082
-
Electromechanical transduction: Reduction-driven hydrophobic folding demonstrated in a model protein to perform mechanical work
-
D.W. Urry, L.C. Hayes, and D.C. Gowda Electromechanical transduction: Reduction-driven hydrophobic folding demonstrated in a model protein to perform mechanical work Biochem Biophys Res Commun 204 1994 230 237
-
(1994)
Biochem Biophys Res Commun
, vol.204
, pp. 230-237
-
-
Urry, D.W.1
Hayes, L.C.2
Gowda, D.C.3
-
38
-
-
0003105108
-
Non-linear hydrophobic-induced pKa shifts: Implications for efficiency of conversion to chemical energy
-
D.W. Urry, D.C. Gowda, S.-Q. Peng, and T.M. Parker Non-linear hydrophobic-induced pKa shifts: Implications for efficiency of conversion to chemical energy Chem Phys Lett 239 1995 67 74
-
(1995)
Chem Phys Lett
, vol.239
, pp. 67-74
-
-
Urry, D.W.1
Gowda, D.C.2
Peng, S.-Q.3
Parker, T.M.4
-
39
-
-
0029087365
-
Electro-chemical transduction in elastic protein-based polymers
-
D.W. Urry, L.C. Hayes, D.C. Gowda, S.-Q. Peng, and N. Jing Electro-chemical transduction in elastic protein-based polymers Biochem Biophys Res Commun 210 1995 1031 1039
-
(1995)
Biochem Biophys Res Commun
, vol.210
, pp. 1031-1039
-
-
Urry, D.W.1
Hayes, L.C.2
Gowda, D.C.3
Peng, S.-Q.4
Jing, N.5
-
40
-
-
0031030332
-
Characterization of waters of hydrophobic hydration by microwave dielectric relaxation
-
D.W. Urry, S.-Q. Peng, J. Xu, and D.T. McPherson Characterization of waters of hydrophobic hydration by microwave dielectric relaxation J Am Chem Soc 119 1997 1161 1162
-
(1997)
J Am Chem Soc
, vol.119
, pp. 1161-1162
-
-
Urry, D.W.1
Peng, S.-Q.2
Xu, J.3
McPherson, D.T.4
-
41
-
-
0032485834
-
Engineering protein-based machines to emulate key steps of metabolism (biological energy conversion)
-
D.W. Urry, S.-Q. Peng, L.C. Hayes, D.T. McPherson, J. Xu, and T.C. Woods Engineering protein-based machines to emulate key steps of metabolism (biological energy conversion) Biotech Bioeng 58 1998 175 190
-
(1998)
Biotech Bioeng
, vol.58
, pp. 175-190
-
-
Urry, D.W.1
Peng, S.-Q.2
Hayes, L.C.3
McPherson, D.T.4
Xu, J.5
Woods, T.C.6
-
42
-
-
0032544312
-
ATP synthesis by rotary catalysis (Nobel Lecture)
-
J.E. Walker ATP synthesis by rotary catalysis (Nobel Lecture) Angew Chem Int Ed Engl 37 1998 2309 2319
-
(1998)
Angew Chem Int Ed Engl
, vol.37
, pp. 2309-2319
-
-
Walker, J.E.1
|