Microarray analysis of gene regulation by oxygen, nitrate, nitrite, FNR, NarL and NarP during anaerobic growth of Escherichia coli: New insights into microbial physiology

Biochemical Society Transactions

Volumn 34, Issue 1, 2006, Pages 104-107

  Overton, T W ^a   Griffiths, L ^a   Patel, M D ^a   Hobman, J L ^a   Penn, C W ^a   Cole, J A ^a   Constantinidou, C ^a  

^a UNIVERSITY OF BIRMINGHAM   (United Kingdom)

Author keywords

Fumarate and nitrate reductase regulon (FNR regulon); MG1655; Microarray; NarXL regulon; Nitrate; Regulation of anaerobic metabolism

Indexed keywords

CARBON; FUMARIC ACID; GLYCEROL; NITRATE; NITRITE; OXYGEN; TRIMETHYLAMINE OXIDE;

BACTERIAL GROWTH; BIOINFORMATICS; CONFERENCE PAPER; ESCHERICHIA COLI; GENE CONTROL; GENE DELETION; MICROARRAY ANALYSIS; MICROBIOLOGY; OPERON; PHYSIOLOGY; PRIORITY JOURNAL; REGULON; RNA ISOLATION;

ANAEROBIOSIS; DNA-BINDING PROTEINS; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, BACTERIAL; IRON-SULFUR PROTEINS; NITRATES; NITRITES; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; OPERON; OXYGEN; REGULON;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI;

EID: 32544461820     PISSN: 03005127     EISSN: None     Source Type: Journal    
DOI: 10.1042/BST0340104     Document Type: Conference Paper

References (18)

1. Compan, I. and Touati, D. (1994) Mol. Microbiol. 11, 955-964
2. Shalel-Levanon, S., San, K.-Y. and Bennett, G.N. (2005) Biotechnol. Bioeng. 92, 147-159
3. Salmon, K., Hung, S.P., Mekjian, K., Baldi, P., Hatfield, G.W. and Gunsalus, R.P. (2003) J. Biol. Chem. 278, 29837-29855
4. Kang, Y., Weber, K.D., Qiu, Y., Kiley, P.J. and Blattner, F.R. (2005) J. Bacteriol. 187, 1135-1160
5. Browning, D.F., Cole, J.A. and Busby, S.J.W. (2004) Mol. Microbiol. 53, 203-215
6. Browning, D.F., Grainger, D.C., Beatty, C.M., Wolfe, A.J., Cole, J.A. and Busby, S.J.W. (2005) Mol. Microbiol. 57, 496-510
7. Stewart, V. and Berg, B.L. (1988) J. Bacteriol. 170, 4437-4444
8. Wang, H., Tseng, C.P. and Gunsalus, R.P. (1999) J. Bacteriol. 181, 5303-5308
9. Potter, L., Millington, P., Thomas, G. and Cole J. (1999) Biochem. J. 344, 77-84
10. Darwin, A.J., Tyson, K.L., Busby, S.J. and Stewart, V. (1997) Mol. Microbiol. 25, 583-595
11. Stewart, V., Bledsoe, P.J. and Williams, S.B. (2003) J. Bacteriol. 185, 5862-5870
12. Gomes, C.M., Giuffre, A., Forte, E., Vicente, J.B., Saraiva, L.M., Brunori, M. and Teixeira, M. (2002) J. Biol. Chem. 277, 25273-25276
13. Hutchings, M.I., Mandhana, N. and Spiro, S. (2002) J. Bacteriol. 184, 4640-4643
14. Justino, M.C., Vicente, J.B., Tiexeira, M. and Saraiva, L.M. (2005) J. Biol. Chem. 280, 2636-2643
15. Gardner, A.M., Gessner, P.R. and Gardner, P.R. (2003) J. Biol. Chem. 278, 10081-10086
16. Poock, S.R., Leach, E.R., Moir, J.W., Cole, J.A. and Richardson, D.J. (2002) J. Biol. Chem. 277, 23664-23669
17. Gardner, P.R., Gardner, A.M., Martin, L.A. and Salzman, A.L. (1998) Proc. Natl. Acad. Sci. U.S.A. 95, 10378-10383
18. Cruz-Ramos, H., Crack, J., Wu, G., Hughes, M.N., Scott, C., Thompson, A.J., Green, J. and Poole, R.K. (2002) EMBO J. 21, 3235-3244