Monitoring of genetic diversity in the Japanese Black cattle population by the use of pedigree information

Journal of Animal Breeding and Genetics

Volumn 121, Issue 4, 2004, Pages 242-252

  Honda, T ^a   Nomura, T ^b   Yamaguchi, Y ^c   Mukai, F ^a  

^a KOBE UNIVERSITY   (Japan)

^b KYOTO SANGYO UNIVERSITY   (Japan)

^c Wagyu Registry Association   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMALIA; BOS TAURUS;

EID: 3242761603     PISSN: 09312668     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1439-0388.2004.00452.x     Document Type: Article

References (32)

1. BARKER, J. S. F., 2001: Conservation and management of genetic diversity: a domestic animal perspective. Can. J. For. Res. 31: 588-595.
2. BAUMUNG, R.; SÖLKNER, J., 2002: Analysis of pedigrees of Tux-Zillertal, Carinthian Blond and Original Pinzgau cattle population in Austria. J. Anim. Breed. Genet. 119: 175-181.
3. BOICHARD, D.; MAIGNEL, L.; VERRIER, E., 1997: The value of using probabilities of gene origin to measure genetic variability in a population. Genet. Sel. Evol. 29: 5-23.
4. CABALLERO, A.; TORO, M. A., 2000: Interrelations between effective population size and other pedigree tools for management of conserved populations. Genet. Res. 75: 331-343.
5. CABALLERO, A.; TORO, M. A., 2002: Analysis of genetic diversity for the management of conserved subdivided populations. Conserv. Genet. 3: 289-299.
6. CHESSER, R. K.; SMITH, M. H.; BRISBIN, I. L. Jr, 1980: Management and maintenance of genetic variability in endangered species. Int. Zoo. Yearbook 20: 146-154.
7. FALCONER, D. S.; MACKAY, T. F. C., 1996: Introduction to Quantitative Genetics, 4th edn. Longman, Harlow, UK.
8. GOYACHE, F.; GUTIERREZ, J. P.; FERNÁNDEZ, I.; GOMEZ, E.; ALVAREZ, I.; DÍEZ, J.; ROYO, L. J., 2003: Using pedigree information to monitor genetic variability of endangered populations: the Xalda sheep breed of Asturias as an example. J. Anim. Breed. Genet. 120: 95-105.
9. HONDA, T.; NOMURA, T.; YAMAGUCHI, Y; MUKAI, F., 2002: Pedigree analysis of genetic subdivision in a population of Japanese Black cattle. Anim. Sci. J. 73: 445-452.
10. KIMURA, M.; CROW, J. F., 1963: On the maximum avoidance of inbreeding. Genet. Res. 4: 399-415.
11. LACY, R. C., 1987: Loss of genetic diversity from managed populations: Interacting effects of drift, mutation, immigration, selection, and population subdivision. Conserv. Biol. 1: 143-158.
12. LACY, R. C., 1989: Analysis of founder representation in pedigrees: Founder equivalents and founder genome equivalents. Zoo. Biol. 8: 111-123.
13. LACY, R. C. 1994: Managing genetic diversity in captive populations of animals. In: M. L. BOWLES, C. J. WHELAN (eds), Restoration of Endangered Species. Cambridge University Press, Cambridge, pp. 63-89.
14. LACY, R. C., 1995: Clarification of genetic terms and their use in the management of captive populations. Zoo. Biol. 14: 565-578.
15. MACCLUER, J. W.; VANDEBERG, J. L.; READ, B.; RYDER, O. A., 1986: Pedigree analysis by computer simulation. Zoo. Biol. 5: 147-160.
16. NAMIKAWA, K., 1992: Wagyu, 2nd edn. Wagyu Registry Association, Kyoto, Japan.
17. NEI, M., 1973: Analysis of gene diversity in subdivided populations. Proc. Natl Acad. Sci. USA 70: 3321-3323.
18. NOMURA, T., 1988: Pedigree analysis on population structure of the Japanese Black cattle. Ph.D. thesis. University of Kyoto, Kyoto, Japan.
19. NOMURA, T.; SASAKI, Y., 1988: Studies on genetic differentiation of Japanese Black cattle by means of multivariate analysis. Jap. J. Zootech. Sci. 59: 952-960.
20. NOMURA, T.; HONDA, T.; MUKAI, F., 2001: Inbreeding and effective population size of Japanese Black cattle. J. Anim. Sci. 79: 366-370.
21. PIRCHNER, F., 1983: Population Genetics in Animal Breeding, 2nd edn. Plenum Press, New York.
22. ROCHAMBEAU, H. DE; DE LA FUENTE, L. F.; ROUVIER, R.; OUHAYOUN, J., 1989: Sélection sur la vitesse de croissance post-sevrage chez le lapin. Genet. Sel. Evol. 21: 527-546.
23. RODRIGÁÑEZ, J.; TORO, M. A.; RODRIGUEZ, M. C.; SILIO, L., 1998: Effect of founder allele survival and inbreeding depression on litter size in a closed line of Large White pigs. Anim. Sci. 67: 573-582.
24. ROUGHSEDGE, T.; BROTHERSTONE, S.; VISSCHER, P. M., 1999: Quantifying genetic contributions to dairy cattle population using pedigree analysis. Livest. Prod. Sci. 60: 359-369.
25. SÖLKNER, J.; FILIPCIC, L.; HAMPSHIRE, N., 1998: Genetic variability of populations and similarity of subpopulations in Austrian cattle breeds determined by analysis of pedigrees. Anim. Sci. 67: 249-256.
26. TORO, M. A.; RODRIGÁÑEZ, J.; SILIO, L.; RODRIGUEZ, C., 2000: Genealogical analysis of a closed herd of Black Hairless Iberian pigs. Conserv. Biol. 14: 1843-1851.
27. WANG, J., 1997a: Effective size and F-statistics of subdivided populations. I. Monoecious species with partial selfing. Genetics 146: 1453-1463.
28. WANG, J., 1997b: Effective size and F-statistics of subdivided populations. II. Dioecious species. Genetics 146: 1465-1474.
29. WOOLLIAMS, J. A.; MÄNTYSAARI, E. A., 1995: Genetic contributions of Finnish Ayshire bulls over four generations. Anim. Sci. 61: 177-187.
30. WRAY, N. R.; THOMPSON, R., 1990: Predictions of rates of inbreeding in selected populations. Genet. Res. 55: 41-54.
31. WRIGHT, S., 1977: Evolution and the genetics of populations. Vol. 3. Experimental Results and Evolutionary Deductions. University of Chicago Press, Chicago, IL.
32. YONEZAWA, K.; ISHII, T.; NOMURA, T.; MORISHIMA, H., 1996: Effetiveness of some management procedures for seed regeneration of plant genetic resources accessions. Genetica 43: 517-524.