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Volumn 58, Issue 2, 2004, Pages 269-279

Enumeration of viable E. coli in rivers and wastewaters by fluorescent in situ hybridization

Author keywords

Direct viable count; E. coli; Fluorescent in situ hybridization (FISH); Viable non culturable bacteria (VBNC)

Indexed keywords

BACTERIAL RNA; MINERAL WATER; RNA 16S;

EID: 3242675346     PISSN: 01677012     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mimet.2004.04.014     Document Type: Article
Times cited : (85)

References (36)
  • 1
    • 0024487957 scopus 로고
    • Effect of visible light on progressive dormancy of Escherichia coli cells during the survival process in natural fresh water
    • Barcina I., Gonzales J.M., Iriberri J., Egea L. Effect of visible light on progressive dormancy of Escherichia coli cells during the survival process in natural fresh water. Appl. Environ. Microbiol. 55:1989;246-251
    • (1989) Appl. Environ. Microbiol. , vol.55 , pp. 246-251
    • Barcina, I.1    Gonzales, J.M.2    Iriberri, J.3    Egea, L.4
  • 2
    • 0036794863 scopus 로고    scopus 로고
    • Rapid and sensitive enumeration of viable diluted cells of members of the family Enterobacteriaceae in freshwater and drinking water
    • Baudart J., Coallier J., Laurent P., Prévost M. Rapid and sensitive enumeration of viable diluted cells of members of the family Enterobacteriaceae in freshwater and drinking water. Appl. Environ. Microbiol. 68:2002;5007-5063
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 5007-5063
    • Baudart, J.1    Coallier, J.2    Laurent, P.3    Prévost, M.4
  • 3
    • 0038532917 scopus 로고    scopus 로고
    • Factors influencing the detection of bacterial cells using fluorescence in situ hybridization (FISH): A quantitative review of published reports
    • Bouvier T., del Giorgio P.A. Factors influencing the detection of bacterial cells using fluorescence in situ hybridization (FISH): a quantitative review of published reports. FEMS Microbiol. Ecol. 44:2003;3-15
    • (2003) FEMS Microbiol. Ecol. , vol.44 , pp. 3-15
    • Bouvier, T.1    Del Giorgio, P.A.2
  • 4
    • 0032827383 scopus 로고    scopus 로고
    • Effectiveness of CSE to counterstain particles and dead bacterial cells with permeabilised membranes: Application to viability assessment in waters
    • Catala P., Parthuisot N., Bernard L., Baudart J., Lemarchand K., Lebaron P. Effectiveness of CSE to counterstain particles and dead bacterial cells with permeabilised membranes: application to viability assessment in waters. FEMS Microbiol. Lett. 178:1999;219-226
    • (1999) FEMS Microbiol. Lett. , vol.178 , pp. 219-226
    • Catala, P.1    Parthuisot, N.2    Bernard, L.3    Baudart, J.4    Lemarchand, K.5    Lebaron, P.6
  • 5
    • 84966196942 scopus 로고
    • Viable but non-culturable Vibrio cholerae and related pathogens in the environment: Implications for release of genetically engineered micro-organisms
    • Colwell R.R., Brayton P.R., Grimes D.J., Roszak D.B., Huq S.A., Palmer L.M. Viable but non-culturable Vibrio cholerae and related pathogens in the environment: implications for release of genetically engineered micro-organisms. Biotechnology. 3:1985;817-820
    • (1985) Biotechnology , vol.3 , pp. 817-820
    • Colwell, R.R.1    Brayton, P.R.2    Grimes, D.J.3    Roszak, D.B.4    Huq, S.A.5    Palmer, L.M.6
  • 7
    • 0023921848 scopus 로고
    • National field evaluation of a defined substrate method for the simultaneous enumeration of total coliforms and Escherichia coli from drinking water: Comparison with the standard multiple tube fermentation method
    • Edberg S.C., Allen M.J., Smith D.B., Then National Collaborative Study National field evaluation of a defined substrate method for the simultaneous enumeration of total coliforms and Escherichia coli from drinking water: comparison with the standard multiple tube fermentation method. Appl. Environ. Microbiol. 54:1988;1595-1601
    • (1988) Appl. Environ. Microbiol. , vol.54 , pp. 1595-1601
    • Edberg, S.C.1    Allen, M.J.2    Smith, D.B.3    National Collaborative Study, T.4
  • 9
    • 0034021291 scopus 로고    scopus 로고
    • Use of enzymatic methods for rapid enumeration of coliforms in freshwaters
    • George I., Petit M., Servais P. Use of enzymatic methods for rapid enumeration of coliforms in freshwaters. J. Appl. Microbiol. 88:2000;404-413
    • (2000) J. Appl. Microbiol. , vol.88 , pp. 404-413
    • George, I.1    Petit, M.2    Servais, P.3
  • 10
    • 0034881817 scopus 로고    scopus 로고
    • Use of β-D-galactosidase and β-D-glucuronidase activities to estimate the microbiological contamination of wastewater
    • George I., Crop P., Servais P. Use of β-D-galactosidase and β-D-glucuronidase activities to estimate the microbiological contamination of wastewater. Can. J. Microbiol. 47:2001;670-675
    • (2001) Can. J. Microbiol. , vol.47 , pp. 670-675
    • George, I.1    Crop, P.2    Servais, P.3
  • 11
    • 3242716723 scopus 로고    scopus 로고
    • Distribution of coliforms in the Seine river and estuary (France)
    • George I., Petit M., Theate C., Servais P. Distribution of coliforms in the Seine river and estuary (France). Estuaries. 24:2001;984-1002
    • (2001) Estuaries , vol.24 , pp. 984-1002
    • George, I.1    Petit, M.2    Theate, C.3    Servais, P.4
  • 12
    • 0022651592 scopus 로고
    • Viability and virulence of Escherichia coli suspended by membrane chamber in semitropical ocean water
    • Grimes D.J.R., Colwell R. Viability and virulence of Escherichia coli suspended by membrane chamber in semitropical ocean water. FEMS Microbiol. Lett. 34:1986;161-165
    • (1986) FEMS Microbiol. Lett. , vol.34 , pp. 161-165
    • Grimes, D.J.R.1    Colwell, R.2
  • 13
    • 0030765059 scopus 로고    scopus 로고
    • Ecological implications of an improved direct viable count method for aquatic bacteria
    • Joux F., Lebaron P. Ecological implications of an improved direct viable count method for aquatic bacteria. Appl. Environ. Microbiol. 63:1997;3643-3647
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 3643-3647
    • Joux, F.1    Lebaron, P.2
  • 14
    • 0033758509 scopus 로고    scopus 로고
    • Use of fluorescent probes to assess physiological functions of bacteria at single-cell level
    • Joux F., Lebaron P. Use of fluorescent probes to assess physiological functions of bacteria at single-cell level. Microbes Infect. 2:2000;1523-1535
    • (2000) Microbes Infect. , vol.2 , pp. 1523-1535
    • Joux, F.1    Lebaron, P.2
  • 15
    • 0031027695 scopus 로고    scopus 로고
    • Succession of cellular states in a Salmonella typhimurium population during starvation in artificial seawater microcosms
    • Joux F., Lebaron P., Troussellier M. Succession of cellular states in a Salmonella typhimurium population during starvation in artificial seawater microcosms. FEMS Microbiol. Ecol. 22:1997;65-76
    • (1997) FEMS Microbiol. Ecol. , vol.22 , pp. 65-76
    • Joux, F.1    Lebaron, P.2    Troussellier, M.3
  • 16
    • 0029766232 scopus 로고    scopus 로고
    • Nested PCR protocol for the rapid detection of Escherichia coli in potable water
    • Juck D., Ingram J., Prévost M., Coallier J., Greer C. Nested PCR protocol for the rapid detection of Escherichia coli in potable water. Can. J. Microbiol. 42:1996;862-866
    • (1996) Can. J. Microbiol. , vol.42 , pp. 862-866
    • Juck, D.1    Ingram, J.2    Prévost, M.3    Coallier, J.4    Greer, C.5
  • 17
    • 0018423107 scopus 로고
    • A tentative direct microscopic method for counting living marine bacteria
    • Kogure K., Simidu U., Taga N. A tentative direct microscopic method for counting living marine bacteria. Can. J. Microbiol. 25:1979;415-420
    • (1979) Can. J. Microbiol. , vol.25 , pp. 415-420
    • Kogure, K.1    Simidu, U.2    Taga, N.3
  • 18
    • 0030872095 scopus 로고    scopus 로고
    • A new sensitive, whole-cell hybridization technique for detection of bacteria involving a biotinylated oligonucleotide probe targeting rRNA and tyramide signal amplification
    • Lebaron P., Catala P., Fajon C., Joux F., Baudart J., Bernard L. A new sensitive, whole-cell hybridization technique for detection of bacteria involving a biotinylated oligonucleotide probe targeting rRNA and tyramide signal amplification. Appl. Environ. Microbiol. 63:1997;3274-3278
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 3274-3278
    • Lebaron, P.1    Catala, P.2    Fajon, C.3    Joux, F.4    Baudart, J.5    Bernard, L.6
  • 19
    • 0035965096 scopus 로고    scopus 로고
    • Comparative assessment of epifluorescence microscopy, flow cytometry and solid-phase cytometry used in the enumeration of specific bacteria in water
    • Lemarchand K., Parthuisot N., Catala P., Lebaron P. Comparative assessment of epifluorescence microscopy, flow cytometry and solid-phase cytometry used in the enumeration of specific bacteria in water. Aquat. Microb. Ecol. 25:2001;301-309
    • (2001) Aquat. Microb. Ecol. , vol.25 , pp. 301-309
    • Lemarchand, K.1    Parthuisot, N.2    Catala, P.3    Lebaron, P.4
  • 21
    • 0343192453 scopus 로고    scopus 로고
    • Fluorescence in situ hybridization (FISH) for direct visualization of microorganisms
    • Moter A., Göbel U.B. Fluorescence in situ hybridization (FISH) for direct visualization of microorganisms. J. Microbiol. Methods. 41:2000;85-112
    • (2000) J. Microbiol. Methods , vol.41 , pp. 85-112
    • Moter, A.1    Göbel, U.B.2
  • 22
    • 0033901324 scopus 로고    scopus 로고
    • Survival of Escherichia coli in freshwater: B-D-glucuronidase activity measurements and characterization of cellular states
    • Petit M., George I., Servais P. Survival of Escherichia coli in freshwater: b-D-glucuronidase activity measurements and characterization of cellular states. Can. J. Microbiol. 46:2000;679-684
    • (2000) Can. J. Microbiol. , vol.46 , pp. 679-684
    • Petit, M.1    George, I.2    Servais, P.3
  • 23
    • 0029908372 scopus 로고    scopus 로고
    • Retention of enteropathogenicity by viable but nonculturable Escherichia coli exposed to seawater and sunlight
    • Pommepuy M., Butin M., Gourmelon M., Colwell R.R., Cormier M. Retention of enteropathogenicity by viable but nonculturable Escherichia coli exposed to seawater and sunlight. Appl. Environ. Microbiol. 62:1996;4621-4626
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 4621-4626
    • Pommepuy, M.1    Butin, M.2    Gourmelon, M.3    Colwell, R.R.4    Cormier, M.5
  • 24
    • 84986870589 scopus 로고
    • Use of DAPI for identifying and counting aquatic microflora
    • Porter K.G., Feig Y.S. Use of DAPI for identifying and counting aquatic microflora. Limnol. Oceanogr. 25:1980;943-948
    • (1980) Limnol. Oceanogr. , vol.25 , pp. 943-948
    • Porter, K.G.1    Feig, Y.S.2
  • 25
    • 0032802330 scopus 로고    scopus 로고
    • Use of PNA oligonucleotides for the in situ detection of Escherichia coli in water
    • Prescott A.M., Fricker C.R. Use of PNA oligonucleotides for the in situ detection of Escherichia coli in water. Mol. Cell. Probes. 13:1999;261-268
    • (1999) Mol. Cell. Probes , vol.13 , pp. 261-268
    • Prescott, A.M.1    Fricker, C.R.2
  • 26
    • 0032925363 scopus 로고    scopus 로고
    • Sensitive detection of Escherichia coli O157:H7 in food and water by immunomagnetic separation and solid-phase laser cytometry
    • Pyle B.H., Broadaway S.C., McFeters G.A. Sensitive detection of Escherichia coli O157:H7 in food and water by immunomagnetic separation and solid-phase laser cytometry. Appl. Environ. Microbiol. 65:1999;1966-1972
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 1966-1972
    • Pyle, B.H.1    Broadaway, S.C.2    McFeters, G.A.3
  • 27
    • 0033833428 scopus 로고    scopus 로고
    • Oligonucleotide probe for the visualization of Escherichia coli/Escherichia fergusonii cells by in situ hybridization: Specificity and potential application
    • Regnault B., Martin-Delautre S., Lejay-Collin M., Lefèvre M., Grimont P.A.D. Oligonucleotide probe for the visualization of Escherichia coli/Escherichia fergusonii cells by in situ hybridization: specificity and potential application. Res. Microbiol. 151:2000;521-533
    • (2000) Res. Microbiol. , vol.151 , pp. 521-533
    • Regnault, B.1    Martin-Delautre, S.2    Lejay-Collin, M.3    Lefèvre, M.4    Grimont, P.A.D.5
  • 28
    • 0034630268 scopus 로고    scopus 로고
    • Problems associated with the direct viable count procedure applied to gram-positive bacteria
    • Regnault B., Martin-Delautre S., Grimont P.A.D. Problems associated with the direct viable count procedure applied to gram-positive bacteria. Int. J. Food Microbiol. 55:2000;281-284
    • (2000) Int. J. Food Microbiol. , vol.55 , pp. 281-284
    • Regnault, B.1    Martin-Delautre, S.2    Grimont, P.A.D.3
  • 30
    • 0026642952 scopus 로고
    • Use of a fluorescent redox probe for direct visualization of actively respiring bacteria
    • Rodriguez G.G., Philips D., Ishiguro K., Rigway L. Use of a fluorescent redox probe for direct visualization of actively respiring bacteria. Appl. Environ. Microbiol. 58:1992;1801-1808
    • (1992) Appl. Environ. Microbiol. , vol.58 , pp. 1801-1808
    • Rodriguez, G.G.1    Philips, D.2    Ishiguro, K.3    Rigway, L.4
  • 32
    • 0023608391 scopus 로고
    • Metabolic activity of bacterial cells enumerated by direct viable count
    • Roszak D.B., Colwell R.R. Metabolic activity of bacterial cells enumerated by direct viable count. Appl. Environ. Microbiol. 53:1987;2889-2983
    • (1987) Appl. Environ. Microbiol. , vol.53 , pp. 2889-2983
    • Roszak, D.B.1    Colwell, R.R.2
  • 33
    • 0035071886 scopus 로고    scopus 로고
    • Rapid detection, identification and enumeration f Escherichia coli by fluorescence in situ hybridization using an array scanner
    • Stender H., Oliveira K., Rigby S., Bargoot F., Coull J. Rapid detection, identification and enumeration f Escherichia coli by fluorescence in situ hybridization using an array scanner. J. Microbiol. Methods. 45:2001;31-39
    • (2001) J. Microbiol. Methods , vol.45 , pp. 31-39
    • Stender, H.1    Oliveira, K.2    Rigby, S.3    Bargoot, F.4    Coull, J.5
  • 34
    • 0033825181 scopus 로고    scopus 로고
    • A 210-min solid phase cytometry test for the enumeration of Escherichia coli in drinking water
    • Van Poucke S.O., Nelis H.J. A 210-min solid phase cytometry test for the enumeration of Escherichia coli in drinking water. J. Appl. Microbiol. 89:2000;390-396
    • (2000) J. Appl. Microbiol. , vol.89 , pp. 390-396
    • Van Poucke, S.O.1    Nelis, H.J.2
  • 35
    • 0033694533 scopus 로고    scopus 로고
    • Exploring the frontier between life and death in Escherichia coli: Evaluation of different viability markers in live and heat- or UV-killed cells
    • Villarino A., Bouvet O.M.M., Regnault B., Martin-Delautre S., Grimont P.A.D. Exploring the frontier between life and death in Escherichia coli: evaluation of different viability markers in live and heat- or UV-killed cells. Res. Microbiol. 151:2000;755-768
    • (2000) Res. Microbiol. , vol.151 , pp. 755-768
    • Villarino, A.1    Bouvet, O.M.M.2    Regnault, B.3    Martin-Delautre, S.4    Grimont, P.A.D.5
  • 36
    • 0026698623 scopus 로고
    • Which fluorophore is the brightest? a comparison of the staining obtained using fluorescein, tetramethylrhodamine, lissamine rhodamine, Texas Red, and cyanine 3.18
    • Wessendorf M.W., Brelje T.C. Which fluorophore is the brightest? A comparison of the staining obtained using fluorescein, tetramethylrhodamine, lissamine rhodamine, Texas Red, and cyanine 3.18. Histochemistry. 98:1992;81-85
    • (1992) Histochemistry , vol.98 , pp. 81-85
    • Wessendorf, M.W.1    Brelje, T.C.2


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