Isolation and partial characterization of antagonistic peptides produced by Paenibacillus sp. strain B2 isolated from the sorghum mycorrhizosphere

Applied and Environmental Microbiology

Volumn 71, Issue 11, 2005, Pages 6501-6507

  Selim, S ^a   Negrel, J ^a   Govaerts, C ^b   Gianinazzi, S ^a   Van Tuinen, D ^a  

^a UNIVERSITÉ DE BOURGOGNE   (France)

^b REGA INSTITUTE FOR MEDICAL RESEARCH   (Belgium)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; BACTERIA; CHARACTERIZATION; FUNGI; LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; PURIFICATION;

ANTAGONISTIC PEPTIDES; GLOMUS MOSSEAE;

POLYPEPTIDES;

2,4 DIAMINOBUTYRIC ACID; LEUCINE; PEPTIDE DERIVATIVE; PHENYLALANINE; POLYMYXIN B; POLYMYXIN DERIVATIVE; THREONINE; TRIPEPTIDE;

PEPTIDE;

AMINO ACID SEQUENCE; ANTIBACTERIAL ACTIVITY; ANTIFUNGAL ACTIVITY; ARTICLE; BACTERIAL COLONIZATION; BACTERIAL STRAIN; BACTERIUM ISOLATE; DRUG STRUCTURE; GEL PERMEATION CHROMATOGRAPHY; GLOMUS MOSSEAE; ION EXCHANGE CHROMATOGRAPHY; MASS SPECTROMETRY; MOLECULAR WEIGHT; MYCORRHIZA; NONHUMAN; PAENIBACILLUS; PAENIBACILLUS B2; REVERSED PHASE LIQUID CHROMATOGRAPHY; SORGHUM; STRUCTURE ANALYSIS;

ANTIBIOSIS; FUSARIUM; GRAM-NEGATIVE BACTERIA; GRAM-POSITIVE BACTERIA; MICROBIAL SENSITIVITY TESTS; PEPTIDES, CYCLIC; PLANT ROOTS; POLYMYXINS; SOIL MICROBIOLOGY; SORGHUM;

BACTERIA (MICROORGANISMS); FUNGI; GLOMUS MOSSEAE; NEGIBACTERIA; PAENIBACILLUS; PAENIBACILLUS SP.; POSIBACTERIA;

EID: 32044459693     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.71.11.6501-6507.2005     Document Type: Article

References (40)

1. Ash, C., F. G. Priest, and M. D. Collins. 1993. Molecular identification of rRNA group 3 bacilli (Ash, Farrow, Wallbanks and Collins) using a PCR probe test. Proposal for the creation of a new genus Paenibacillus. Antonie Leeuwenhoek 64:253-260.
2. Axelrood, P. E., M. L. Chow, C. S. Arnold, K. Lu, J. M. McDermott, and J. Davies. 2002. Cultivation-dependent characterization of bacterial diversity from British Columbia forest soils subjected to disturbance. Can. J. Microbiol. 48:643-654.
3. Batinic, T., J. Schmitt, U. M. Schulz, and D. Werner. 1998. Construction of RAPD-generated DNA probes for the quantification of Bacillus subtilis FZBC and the evaluation of its biocontrol efficiency in the system Cucumis sativus-Pythium ultimum. J. Plant Dis. Prot. 105:168-180.
4. Beatty, P. H., and S. E. Jensen. 2002. Paenibacillus polymyxa produces fusaricidin-type antifungal antibiotics active against Leptosphaeria maculans, the causative agent of blackleg disease of canola. Can. J. Microbiol. 48:159-169.
5. Bechard, J., K. C. Eastwell, P. L. Sholberg, G. Mazza, and B. Skura. 1998. Isolation and partial chemical characterization of an antimicrobial peptide produced by strain of Bacillus subtilis. J. Agric. Food Chem. 46:5355-5361.
6. Berger, F., H. Li, D. Whitr, R. Frazer, and C. Leifert. 1996. Effect of pathogen inoculum, antagonist density, and plant species on biological control of Phytophthora and Pythium damping-off by Bacillus subtilis Cot 1 in high-humidity of fogging glasshouses. Phytopathology 86:428-433.
7. Bloquiaux, S., and L. Delcambre. 1956. Essais de traitment de dermatomucoses par l'iturine. Arch. Belg. Derm. Syph. 12:244.
8. Budi, S. W., D. van Tuinen, C. Arnould, E. Dumas-Gaudot, V. Gianinazzi-Pearson, and S. Gianinazzi. 2000. Hydrolytic enzyme activity of Paenibacillus sp. strain B2 and effects of the antagonistic bacterium on cell integrity of two soil-borne pathogenic fungi. Appl. Soil Ecol. 15:191-199.
9. Budi, S. W., D. van Tuinen, G. Martinotti, and S. Gianinazzi. 1999. Isolation from the Sorghum bicolor mycorrhizosphere of a bacterium compatible with arbuscular mycorrhiza development and antagonistic towards soil-borne fungal pathogens. Appl. Environ. Microbiol. 65:5148-5150.
10. Chatterjee, S., D. K. Chatterjee, R. H. Jani, J. Blumbach, and B. N. Ganguli. 1992. Mersacidin, a new antibiotic from Bacillus. In vitro and in vivo antifungal activity. J. Antibiot. 45:839-845.
11. Chernin, L., Z. Ismailov, S. Haran, and I. Chet. 1995. Chitinolytic Enterobacter agglomerans antagonistic to fungal plant pathogens. Appl. Environ. Microbiol. 61:1720-1726.
12. Difco Laboratories. 1984. Dehydrated culture media and reagents for microbiology, 10th ed. Difco Laboratories, Detroit, Mich.
13. Dunn, C., J. J. Crowley, Y. Moenne-Loccoz, D. N. Dowling, F. J. de Bruijn, and F. O'Gara. 1997. Biological control of Pythium ultimum by Stenotrophomonas maltophilia W18 is mediated by an extracellular proteolytic activity. Microbiology 143:3921-3931.
14. Eckart, K. 1994. Mass spectrometry of cyclic peptides. Mass Spectrom. Rev. 13:23-55.
15. Ferrira, J. H. S., F. N. Matthee, and A. C. Thomas. 1991. Biological control of Eutypa lata on grapevine by an antagonistic strain of Bacillus subtilis. Phytopathology 81:283-287.
16. Godel, H., P. Seitz, and M. Verhoef. 1991. Automated amino acid analysis using combined OPA and FMOC-Cl pre-column derivatization. LC-GC Int. 5:44-49.
17. Herbert, P., P. Barros, N. Ratola, and A. Alves. 2000. HPLC determination of amino acids in musts and port wine using OPA/FMOC derivatives. J. Food Sci. 65:1130-1133.
18. Jijakli, H. M., and P. Lepoivre. 1998. Characterization of an exo-β-1,3-glucanase produced by Pichia anomala strain K, antagonist of Botrytis cinerea on apples. Phytopathology 88:335-343.
19. Kajimura, Y., M. Sugiyama, and M. Kaneda. 1995. Bacillopeptins, new cyclic lipopeptde antibiotics from Bacillus subtilis FR-2. J. Antibiot. 48:1095-1103.
20. Korsten, L., E. E. De Villiers, F. C. Wehner, and J. M. Kotze. 1997. Field sprays of Bacillus subtilis and fungicides for control of preharvest fruit diseases of avocado in South Africa. Plant Dis. 81:455-459.
21. Krzek, J., M. Starek, A. Kwiecien, and W. Rzeszutko. 2001. Simultaneous identification and quantitative determination of neomycin sulfate, polymyxin B sulfate, zinc bacytracin and methyl and propyl hydroxybenzoates in ophthalmic ointment by TLC. J. Pharm. Biomed. Anal. 24:629-636.
22. Lampis, G., D. Deidda, C. Maullu, M. A. Madeddu, and R. Pompei. 1995. Sattabacins and sattazolins: new biological active compounds with antiviral properties extracted from a Bacillus sp. J. Antibiot. 48:967-972.
23. Landj, M., G. Warren, S. Roseman, and L. Colic. 1948. Bacillomycin, an antibiotic from Bacillus subtilis, active against pathogenic fungi. Proc. Soc. Exp. Biol. Med. 67:539-541.
24. Lee, M. K., L. Cha, S. H. Lee, and K.-S. Hahm. 2002. Role of amino acid residues within the disulfide loop of thanatin, a potent antibiotic peptide. J. Biochem. Mol. Biol. 35:291-296.
25. Lee, S. G., V. Pancholi, and V. A. Fischetti. 2002. Characterization of a unique glycosylated anchor endopeptidase that cleaves the LPXTG sequence motif of cell surface proteins of Gram-positive bacteria. J. Biol. Chem. 277:46912-46922.
26. Martin, N. I., H. Hu, M. M. Moake, J. J. Churey, R. Whittal, R. W. Worobo, and J. C. Vederas. 2003. Isolation, structural characterization, and properties of mattacin (polymyxin M), a cyclyc peptide antibiotic produced by Paenibacillus kobensis M. J. Biol. Chem. 278:13124-13132.
27. Moore, R. A., N. C. Bates, and R. E. W. Hancock. 1986. Interaction of polycationic antibiotics with Pseudomonas aeruginosa lipopolysaccharide and lipid A studied by using dansyl-polymixin. Antimicrob. Agents Chemother. 9:496-500.
28. Ohno, A., T. Ano, and M. Shoda. 1993. Production of the antifungal peptide antibiotic iturin by Bacillus subtilis NB22 in solid state fermentation. J. Ferment. Bioeng. 75:23-27.
29. 2 in aqueous solution using liquid chromatography and mass spectrometry. Pharm. Biomed. Anal. 29:203-212.
30. O'Sullivan, D. J., and F. O'Gara. 1992. Traits of fluorescent Pseudomonas spp. involved in suppression of plant root pathogens. Microbiol. Rev. 56: 662-676.
31. Phae, C. G., M. Shoda, and H. Kubota. 1996. Suppression effect of Bacillus subtilis and its products on phytopathogenic microorganisms. J. Ferment. Bioeng. 69:1-7.
32. Podile, A. R., and A. P. Prakash. 1996. Lysis and biological control of Aspergillus niger by Bacillus subtilis AFI. Can. J. Microbiol. 42:533-538.
33. Schwartz, S. N., G. Medoff, G. S. Kobayashi, C. N. Kwan, and D. Schlessinger. 1972. Antifungal properties of polymyxin B and its potentiation of tetracycline as an antifungal agent. Antimicrob. Agents Chemother. 2:36-40.
34. Shoji, J., T. Kato, and H. Hinoo. 1977. The structure of polymyxin T. J. Antibiot. 30:1042-1048.
35. Storm, D. R., K. S. Rosenthal, and P. E. Swanson. 1977. Polymyxin and related peptide antibiotics. Annu. Rev. Biochem. 46:723-763.
36. Thomashow, L. S., and D. M. Weller. 1988. Role of phenazine antibiotic from, Pseudomonas fluorescens in biological control of Gaeumannomyces graminis var. tritici. J. Bacteriol. 170:3499-3508.
37. Tsubery, H., I. Ofek, S. Cohen, and M. Fridkin. 2000. Structure-function studies of polymyxin B nonapeptide: implications to sensitization of Gram-negative bacteria. J. Med. Chem. 43:3085-3092.
38. Umezawa, H., T. Takita, and T. Shiba. 1978. Bioactive peptides produced by microorganisms. John Wiley and Sons, Toronto, Canada.
39. Utkhede, R. S., and P. L. Sholberg. 1986. In vitro inhibition of plant pathogens by Bacillus subtilis and Entrobacter aerogenes and in vitro control of two post-harvest cherry disease. Can. J. Microbiol. 32:963-967.
40. L-A. J. Antibiot. 36:1451-1457.