Complete nucleotide sequence of pSCV50, the virulence plasmid of Salmonella enterica serovar Choleraesuis SC-B67

Plasmid

Volumn 55, Issue 2, 2006, Pages 145-151

  Yu, Hong ^a   Wang, Jianbin ^a   Ye, Jiehua ^a   Tang, Petrus ^b   Chu, Chishih ^c   Hu, Songnian ^a   Chiu, Cheng Hsun ^b  

^a ZHEJIANG UNIVERSITY   (China)

^b CHANG GUNG UNIVERSITY COLLEGE OF MEDICINE   (Taiwan)

^c NATIONAL CHIAYI UNIVERSITY   (Taiwan)

Author keywords

Annotation; Nucleotide sequence; Salmonella enterica serovar Choleraesuis; Virulence plasmid

Indexed keywords

AMINO ACID SUBSTITUTION; ARTICLE; BACTERIAL GENE; BACTERIAL INFECTION; BACTERIAL STRAIN; BACTERIAL VIRULENCE; GENE DELETION; GENE EXPRESSION; GENE FUNCTION; GENE INSERTION; GENETIC SELECTION; MOLECULAR EVOLUTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PLASMID; SALMONELLA ENTERICA; SEQUENCE HOMOLOGY; SEROTYPE;

CHROMOSOME MAPPING; MOLECULAR SEQUENCE DATA; PLASMIDS; SALMONELLA ENTERICA; VIRULENCE;

BACTERIA (MICROORGANISMS); SALMONELLA ENTERICA; SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR CHOLERAESUIS;

EID: 32044434410     PISSN: 0147619X     EISSN: 10959890     Source Type: Journal    
DOI: 10.1016/j.plasmid.2005.09.001     Document Type: Article

References (25)

1. S.F. Altschul, T.L. Madden, A.A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D.J. Lipman Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Res. 25 1997 3389 3402
2. S. Bocs, A. Danchin, and C. Medigue Re-annotation of genome microbial coding-sequences: finding new genes and inaccurately annotated genes BMC Bioinformatics 3 2002 5
3. G.K. Chikami, J. Fierer, and D.G. Guiney Plasmid-mediated virulence in Salmonella dublin demonstrated by use of a Tn 5-oriT construct Infect. Immun. 50 1985 420 424
4. C.H. Chiu Isolation of Salmonella enterica serotype Choleraesuis resistant to ceftriaxone and ciprofloxacin Lancet 363 2004 1285 1286
5. C.H. Chiu, L.H. Su, and C. Chu Salmonella enterica serotype Choleraesuis: epidemiology, pathogenesis, clinical disease, and treatment Clin. Microbiol. Rev. 17 2004 311 322
6. C.H. Chiu The genome sequence of Salmonella enterica serovar Choleraesuis, a highly invasive and resistant zoonotic pathogen Nucleic Acids Res. 33 2005 1690 1698
7. A.L. Delcher, D. Harmon, S. Kasif, O. White, and S.L. Salzberg Improved microbial gene identification with GLIMMER Nucleic Acids Res. 27 1999 4636 4641
8. R.A. Edwards, G.J. Olsen, and S.R. Maloy Comparative genomics of closely related salmonellae Trends Microbiol. 10 2002 94 99
9. B. Ewing, and P. Green Base-calling of automated sequencer traces using phred. II. Error probabilities Genome Res. 8 1998 186 194
10. B. Ewing, L. Hillier, M.C. Wendl, and P. Green Base-calling of automated sequencer traces using phred. I. Accuracy assessment Genome Res. 8 1998 175 178
11. D.M. Ferber, and R.R. Brubaker Plasmids in Yersinia pestis Infect. Immun. 31 1981 839 841
12. D. Frishman, A. Mironov, H.W. Mewes, and M. Gelfand Starts of bacterial genes: estimating the reliability of computer predictions Gene 234 1999 257 265
13. P. Gemski, J.R. Lazere, T. Casey, and J.A. Wohlhieter Presence of a virulence-associated plasmid in Yersinia pseudotuberculosis Infect. Immun. 28 1980 1044 1047
14. D. Gordon, C. Abajian, and P. Green A graphical tool for sequence finishing Genome Res. 8 1998 195 202
15. D.G. Guiney, F.C. Fang, M. Krause, and S. Libby Plasmid-mediated virulence genes in non-typhoid Salmonella serovars FEMS Microbiol. Lett. 124 1994 1 9
16. T. Haneda, N. Okada, N. Nakazawa, T. Kawakami, and H. Danbara Complete DNA sequence and comparative analysis of the 50-kilobase virulence plasmid of Salmonella enterica serovar Choleraesuis Infect. Immun. 69 2001 2612 2620
17. G.W. Jones, D.K. Rabert, D.M. Svinarich, and H.J. Whitfield Association of adhesive, invasive, and virulent phenotypes of Salmonella typhimurium with autonomous 60-megadalton plasmids Infect. Immun. 38 1982 376 386
18. K. Kawahara, Y. Haraguchi, M. Tsuchimoto, N. Terakado, and H. Danbara Evidence of correlation between 50-kilobase plasmid of Salmonella choleraesuis and its virulence Microb. Pathog. 4 1988 155 163
19. S.J. Libby, M. Lesnick, P. Hasegawa, E. Weidenhammer, and D.G. Guiney The Salmonella virulence plasmid spv genes are required for cytopathology in human monocyte-derived macrophages Cell. Microbiol. 2 2000 49 58
20. N.J. Mulder The InterPro Database, 2003 brings increased coverage and new features Nucleic Acids Res. 31 2003 315 318
21. M. Nakamura, S. Sato, T. Ohya, S. Suzuki, and S. Ikeda Possible relationship of a 36-megadalton Salmonella enteritidis plasmid to virulence in mice Infect. Immun. 47 1985 831 833
22. C.A. Ouzounis, and P.D. Karp The past, present and future of genome-wide re-annotation Genome Biol. 3 2002 1 6
23. P.J. Sansonetti, D.P. Kopecko, and S.B. Formal Involvement of a plasmid in the invasive ability of Shigella flexneri Infect. Immun. 35 1982 852 860
24. C. Sasakawa, J.M. Buysse, and H. Watanabe The large virulence plasmid of Shigella Curr. Top. Microbiol. Immunol. 180 1992 21 44
25. N. Terakado, T. Sekizaki, H. Hashimoto, and S. Naitoh Correlation between the presence of a fifty-megadalton plasmid in Salmonella dublin and virulence for mice Infect. Immun. 41 1983 443 444