Protein recycling is a major component of post-irradiation recovery in Deinococcus radiodurans strain R1

Biochemical and Biophysical Research Communications

Volumn 320, Issue 4, 2004, Pages 1112-1117

  Joshi, Bhakti ^a   Schmid, Roland ^b   Altendorf, Karlheinz ^b   Apte, Shree Kumar ^a  

^a BHABHA ATOMIC RESEARCH CENTRE   (India)

^b UNIVERSITY OF OSNABRÜCK   (Germany)

Author keywords

Chaperones; Deinococcus; PHX proteins; Post irradiation recovery; Protein recycling; Proteomics; Radioresistance

Indexed keywords

ARTICLE; CONTROLLED STUDY; DEINOCOCCUS RADIODURANS; DNA REPAIR; ENZYME DEGRADATION; ENZYME SYNTHESIS; GAMMA IRRADIATION; NONHUMAN; PREDICTION; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEIN SYNTHESIS;

ADAPTATION, PHYSIOLOGICAL; BACTERIAL PROTEINS; CELL DIVISION; DEINOCOCCUS; PROTEOME; RADIATION TOLERANCE; RECOVERY OF FUNCTION; SPECIES SPECIFICITY;

BACTERIA (MICROORGANISMS); DEINOCOCCUS; DEINOCOCCUS RADIODURANS;

EID: 3142768316     PISSN: 0006291X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbrc.2004.06.062     Document Type: Article

References (26)

1. Battista J.R. Against all odds: the survival strategies of Deinococcus radiodurans. Annu. Rev. Microbiol. 51:1997;203-224
2. Makarova K.S., Aravind L., Wolf Y.I., Tatusov R.L., Minton K.W., Koonin E.V., Daly M.J. Genome of the extremely radiation-resistant bacterium Deinococcus radiodurans viewed from the perspective of comparative genomics. Microbiol. Mol. Biol. Rev. 65:2001;44-79
3. Minton K.W. DNA repair in the extremely radioresistant bacterium Deinococcus radiodurans. Mol. Microbiol. 13:1994;9-15
4. White O., Eisen J.A., Heidelberg J.F., Hickey E.K., Peterson J.D., Dodson R.J., Haft D.H., Gwinn M.L., Nelson W.C., Richardson D.L., Moffat K.S., Qin H., Jiang L., Pamphile W., Crosby M., Shen M., Vamathevan J.J., Lam P., McDonald L., Utterback T., Zalewski C., Makarova K.S., Aravind L., Daly M.J., Fraser C.M. Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1. Science. 286:1999;1571-1577
5. Levin-Zaidman S., Englander J., Shimoni E., Sharma A.K., Minton K.W., Minsky A. Ringlike structure of the Deinococcus radiodurans genome: a key to radioresistance. Science. 299:2003;254-256
6. Gutman P.D., Carroll J.D., Masters C.I., Minton K.W. Sequencing, targeted mutagenesis and expression of a recA gene required for extreme radioresistance of Deinococcus radiodurans. Gene. 141:1994;31-37
7. Gutman P.D., Fuchs P., Ouyang L., Minton K.W. Identification, sequencing and targeted mutagenesis of a DNA polymerase gene required for the extreme radioresistance of Deinococcus radiodurans. J. Bacteriol. 175:1993;3581-3590
8. Hua Y., Narumi I., Gao G., Tian B., Satoh K., Kitayama S., Shen B. PprI: a general switch responsible for extreme radioresistance of Deinococcus radiodurans. Biochem. Biophys. Res. Commun. 306:2003;354-360
9. Earl A.M., Mohundro M.M., Mian I.S., Battista J.R. The IrrE protein of Deinococcus radiodurans R1 is a novel regulator of recA expression. J. Bacteriol. 184:2002;6216-6224
10. Liu Y., Zhou J., Omelchenko M.V., Beliaev A.S., Venkateswaran A., Stair J., Wu L., Thompson D.K., Xu D., Rogozin I.B., Gaidamakova E.K., Zhai M., Makarova K.S., Koonin E.V., Daly M.J. Transcriptome dynamics of Deinococcus radiodurans recovering from ionizing radiation. Proc. Natl. Acad. Sci. USA. 100:2003;4191-4196
11. Gygi S.P., Rochon Y., Franza B.R., Aebersold R. Correlation between protein and mRNA abundance in yeast. Mol. Cell. Biol. 19:1999;1720-1730
12. Tao H., Bausch C., Richmond C., Blattner F.R., Conway T. Functional genomics: expression analysis of Escherichia coli growing on minimal and rich media. J. Bacteriol. 181:1999;6425-6440
13. Karlin S., Mrazek J. Predicted highly expressed and putative alien genes of Deinococcus radiodurans and implications for resistance to ionizing radiation damage. Proc. Natl. Acad. Sci. USA. 98:2001;5240-5245
14. Tanaka A., Hirano H., Kikuchi M., Kitayama S., Watanabe H. Changes in cellular proteins of Deinococcus radiodurans following gamma-irradiation. Radiat. Environ. Biophys. 35:1996;95-99
15. Lipton M.S., Pasa-Tolic' L., Anderson G.A., Anderson D.J., Auberry D.L., Battista J.R., Daly M.J., Fredrickson J., Hixson K.K., Kostandarithes H., Masselon C., Markillie L.M., Moore R.J., Romine M.F., Shen Y., Stritmatter E., Tolic' N., Udseth H.R., Venkateswaran A., Wong K.K., Zhao R., Smith R.D. Global analysis of the Deinococcus radiodurans proteome by using accurate mass tags. Proc. Natl. Acad. Sci. USA. 99:2002;11049-11054
16. Laemmli U.K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 227:1970;680-685
17. Peterson G.L. A simplification of the protein assay method of Lowry, et al. which is more generally applicable. Anal. Biochem. 83:1977;346-356
18. O'Farrell P.H. High resolution two-dimensional electrophoresis of proteins. J. Biol. Chem. 250:1975;4007-4021
19. Graumann P., Schroeder K., Schmid R., Marahiel M. Cold shock stress induced proteins in Bacillus subtilis. J. Bacteriol. 178:1996;4611-4619
20. Moseley B.E.B. Photobiology and radiobiology of Micrococcus (Deinococcus) radiodurans. Photochem. Photobiol. Rev. 7:1983;223-275
21. Bukau B., Deuerling E., Pfund C., Craig E.A. Getting newly synthesized proteins into shape. Cell. 101:2000;119-122
22. Travers A.A. Control of ribosomal RNA synthesis in vitro. Nature. 244:1973;15-19
23. Varghese S., Tang Y., Imlay J.A. Contrasting sensitivities of Escherichia coli aconitases A and B to oxidation and iron depletion. J. Bacteriol. 185:2003;221-230
24. Guthrie B., Wickner W. Trigger factor depletion or overproduction causes defective cell division but does not block protein export. J. Bacteriol. 172:1990;5555-5562
25. Georgopoulos C.P., Eisen H. Bacterial mutants which block phage assembly. J. Supramol. Struct. 2:1972;349-359
26. Paek K.H., Walker G.C. Escherichia coli dnaK null mutants are inviable at high temperature. J. Bacteriol. 169:1987;283-290