GeneAnnot: Comprehensive two-way linking between oligonucleotide array probesets and GeneCards genes

Bioinformatics

Volumn 20, Issue 9, 2004, Pages 1457-1458

  Chalifa Caspi, Vered ^a   Yanai, Itai ^a   Ophir, Ron ^a   Rosen, Naomi ^a   Shmoish, Michael ^a   Benjamin Rodrig, Hila ^a   Shklar, Maxim ^a   Stein, Tsippi Iny ^a   Shmueli, Orit ^a   Safran, Marilyn ^a   Lancet, Doron ^a  

^a WEIZMANN INSTITUTE OF SCIENCE   (Israel)

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA; OLIGONUCLEOTIDE;

ALGORITHM; ALTERNATIVE RNA SPLICING; ARTICLE; COMPUTER PROGRAM; DNA MICROARRAY; GENE MAPPING; GENETIC TRANSCRIPTION; MEDICAL DOCUMENTATION; OLIGONUCLEOTIDE PROBE; PRIORITY JOURNAL; SCORING SYSTEM; SENSITIVITY AND SPECIFICITY; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS;

EID: 3142749139     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/bth081     Document Type: Article

References (5)

1. Kent,W.J. (2002) BLAT - the BLAST-like alignment tool. Genome Res., 12, 656-664.
2. Liu,G., Loraine,A.E., Shigeta,R., Cline,M., Cheng,J., Valmeekam,V., Sun,S., Kulp,D. and Siani-Rose,M.A. (2003) NetAffx: Affymetrix probesets and annotations. Nucleic Acids Res., 31, 82-86.
3. Rosen,N., Chalifa-Caspi,V., Shmueli,O., Adato,A., Lapidot,M., Stampnitzky,J., Safran,M. and Lancet,D. (2003) GeneLoc: exon-based integration of human genome maps. Bioinformatics, 19 (Suppl. 1), i222-i224.
4. Safran,M., Solomon,I., Shmueli,O., Lapidot,M., Shen-Orr,S., Adato,A., Ben-Dor,U., Esterman,N., Rosen,N., Peter,I. et al. (2002) GeneCards(TM) 2002: towards a complete, object-oriented, human gene compendium. Bioinformatics, 18, 1542-1543.
5. Shmueli,O., Horn-Saban,S., Chalifa-Caspi,V., Shmoish,M., Ophir,R., Benjamin-Rodrig,H., Safran,M., Domany,E. and Lancet,D. (2003) GeneNote: whole genome expression profiles in normal human tissues. C. R. Biol., 326, 1067-1072.