-
1
-
-
0000148162
-
Regulation of chromosomally mediated multiple antibiotic resistance: The mar regulon
-
Alekshun, M.N., and Levy, S.B. (1997) Regulation of chromosomally mediated multiple antibiotic resistance: the mar regulon. Antimicrob Agents Chemother 41: 2067-2075.
-
(1997)
Antimicrob Agents Chemother
, vol.41
, pp. 2067-2075
-
-
Alekshun, M.N.1
Levy, S.B.2
-
2
-
-
0032792553
-
Alteration of the repressor activity of MarR, the negative regulator of the Escherichia coli marRAB locus, by multiple chemicals in vitro
-
Alekshun, M.N., and Levy, S.B. (1999) Alteration of the repressor activity of MarR, the negative regulator of the Escherichia coli marRAB locus, by multiple chemicals in vitro. J Bacteriol 181: 4669-4672.
-
(1999)
J Bacteriol
, vol.181
, pp. 4669-4672
-
-
Alekshun, M.N.1
Levy, S.B.2
-
3
-
-
0034887133
-
The crystal structure of MarR, a regulator of multiple antibiotic resistance, at 2.3 A resolution
-
Alekshun, M.N., Levy, S.B., Mealy, T.R., Seaton, B.A., and Head, J.F. (2001) The crystal structure of MarR, a regulator of multiple antibiotic resistance, at 2.3 A resolution. Nature Struct Biol 8: 710-714.
-
(2001)
Nature Struct Biol
, vol.8
, pp. 710-714
-
-
Alekshun, M.N.1
Levy, S.B.2
Mealy, T.R.3
Seaton, B.A.4
Head, J.F.5
-
4
-
-
0028924091
-
Activation of multiple antibiotic resistance and binding of stress-inducible promoters by Escherichia coli Rob protein
-
Ariza, R.R., Li, Z., Ringstad, N., and Demple, B. (1995) Activation of multiple antibiotic resistance and binding of stress-inducible promoters by Escherichia coli Rob protein. J Bacteriol 177: 1655-1661.
-
(1995)
J Bacteriol
, vol.177
, pp. 1655-1661
-
-
Ariza, R.R.1
Li, Z.2
Ringstad, N.3
Demple, B.4
-
5
-
-
0034119459
-
Differential expression of over 60 chromosomal genes in Escherichia coli by constitutive expression of MarA
-
Barbosa, T.M., and Levy, S.B. (2000) Differential expression of over 60 chromosomal genes in Escherichia coli by constitutive expression of MarA. J Bacteriol 182: 3467-3474.
-
(2000)
J Bacteriol
, vol.182
, pp. 3467-3474
-
-
Barbosa, T.M.1
Levy, S.B.2
-
6
-
-
0032541436
-
Ribosomes inhibit an RNase E cleavage which induces the decay of the rpsO mRNA of Escherichia coli
-
Braun, F., Le Derout, J., and Régnier, P. (1998) Ribosomes inhibit an RNase E cleavage which induces the decay of the rpsO mRNA of Escherichia coli. EMBO J 17: 4790-4797.
-
(1998)
EMBO J
, vol.17
, pp. 4790-4797
-
-
Braun, F.1
Le Derout, J.2
Régnier, P.3
-
7
-
-
0028584414
-
Determination of the optimal aligned spacing between the Shine-Dalgarno sequence and the translation initiation codon of Escherichia coli mRNAs
-
Chen, H., Bjerknes, M., Kumar, R., and Jay, E. (1994) Determination of the optimal aligned spacing between the Shine-Dalgarno sequence and the translation initiation codon of Escherichia coli mRNAs. Nucleic Acids Res 22: 4953-4957.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4953-4957
-
-
Chen, H.1
Bjerknes, M.2
Kumar, R.3
Jay, E.4
-
8
-
-
0027419613
-
Genetic and functional analysis of the multiple antibiotic resistance (mar) locus in Escherichia coli
-
Cohen, S.P., Hächler, H., and Levy, S.B. (1993a) Genetic and functional analysis of the multiple antibiotic resistance (mar) locus in Escherichia coli. J Bacteriol 175: 1484-1492.
-
(1993)
J Bacteriol
, vol.175
, pp. 1484-1492
-
-
Cohen, S.P.1
Hächler, H.2
Levy, S.B.3
-
9
-
-
0027131605
-
Salicylate induction of antibiotic resistance in Escherichia coli: Activation of the mar operon and a mar-independent pathway
-
Cohen, S.P., Levy, S.B., Foulds, J., and Rosner, J.L. (1993b) Salicylate induction of antibiotic resistance in Escherichia coli: activation of the mar operon and a mar-independent pathway. J Bacteriol 175: 7856-7862.
-
(1993)
J Bacteriol
, vol.175
, pp. 7856-7862
-
-
Cohen, S.P.1
Levy, S.B.2
Foulds, J.3
Rosner, J.L.4
-
10
-
-
0030574274
-
Redox signaling and gene control in the Escherichia coli soxRS oxidative stress regulon - A review
-
Demple, B. (1996) Redox signaling and gene control in the Escherichia coli soxRS oxidative stress regulon - a review. Gene 179: 53-57.
-
(1996)
Gene
, vol.179
, pp. 53-57
-
-
Demple, B.1
-
11
-
-
1642524483
-
Proteolytic degradation of Escherichia coli transcription activators SaxS and MarA as the mechanism for reversing the induction of the superoxide (Sox RS) and multiple antibiotic resistance (mar) regulons
-
Griffith, K.L., Shah, I.M., and Wolf, R.E., Jr (2004) Proteolytic degradation of Escherichia coli transcription activators SaxS and MarA as the mechanism for reversing the induction of the superoxide (Sox RS) and multiple antibiotic resistance (mar) regulons. Mol Microbiol 51: 1801-1816.
-
(2004)
Mol Microbiol
, vol.51
, pp. 1801-1816
-
-
Griffith, K.L.1
Shah, I.M.2
Wolf Jr., R.E.3
-
12
-
-
0026095607
-
marA, a regulated locus which controls expression of chromosomal multiple antibiotic resistance in Escherichia coli
-
Hächler, H., Cohen, S.P., and Levy, S.B. (1991) marA, a regulated locus which controls expression of chromosomal multiple antibiotic resistance in Escherichia coli. J Bacteriol 173: 5532-5538.
-
(1991)
J Bacteriol
, vol.173
, pp. 5532-5538
-
-
Hächler, H.1
Cohen, S.P.2
Levy, S.B.3
-
13
-
-
0026033684
-
Influence of mRNA determinants on translation initiation in Escherichia coli
-
Hartz, D., McPheeters, D.S., and Gold, L. (1991) Influence of mRNA determinants on translation initiation in Escherichia coli. J Mol Biol 218: 83-97.
-
(1991)
J Mol Biol
, vol.218
, pp. 83-97
-
-
Hartz, D.1
McPheeters, D.S.2
Gold, L.3
-
14
-
-
0029671285
-
Ambidextrous transcriptional activation by SoxS: Requirement for the C-terminal domain of the RNA polymerase alpha subunit in a subset of Escherichia coli superoxide-inducible genes
-
Jair, K.W., Fawcett, W.P., Fujita, N., Ishihama, A., and Wolf, R.E., Jr (1996a) Ambidextrous transcriptional activation by SoxS: requirement for the C-terminal domain of the RNA polymerase alpha subunit in a subset of Escherichia coli superoxide-inducible genes. Mol Microbiol 19: 307-317.
-
(1996)
Mol Microbiol
, vol.19
, pp. 307-317
-
-
Jair, K.W.1
Fawcett, W.P.2
Fujita, N.3
Ishihama, A.4
Wolf Jr., R.E.5
-
15
-
-
0029863748
-
Transcriptional activation of promoters of the superoxide and multiple antibiotic resistance regulons by Rob, a binding protein of the Escherichia coli origin of chromosomal replication
-
Jair, K.W., Yu, X., Skarstad, K., Thöny, B., Fujita, N., Ishihama, A., and Wolf, R.E., Jr (1996b) Transcriptional activation of promoters of the superoxide and multiple antibiotic resistance regulons by Rob, a binding protein of the Escherichia coli origin of chromosomal replication. J Bacteriol 178: 2507-2513.
-
(1996)
J Bacteriol
, vol.178
, pp. 2507-2513
-
-
Jair, K.W.1
Yu, X.2
Skarstad, K.3
Thöny, B.4
Fujita, N.5
Ishihama, A.6
Wolf Jr., R.E.7
-
16
-
-
0032544304
-
In the absence of translation, RNase E can bypass 5′ mRNA stabilizers in Escherichia coli
-
Joyce, S.A., and Dreyfus, M. (1998) In the absence of translation, RNase E can bypass 5′ mRNA stabilizers in Escherichia coli. J Mol Biol 282: 241-254.
-
(1998)
J Mol Biol
, vol.282
, pp. 241-254
-
-
Joyce, S.A.1
Dreyfus, M.2
-
17
-
-
0033607261
-
Thermodynamics of single mismatches in RNA duplexes
-
Kierzek, R., Burkard, M.E., and Turner, D.H. (1999) Thermodynamics of single mismatches in RNA duplexes. Biochemistry 38: 14214-11423.
-
(1999)
Biochemistry
, vol.38
, pp. 14214-111423
-
-
Kierzek, R.1
Burkard, M.E.2
Turner, D.H.3
-
18
-
-
0015873924
-
Isolation of deoxyribonucleic acid methylase mutants of Escherichia coli K-12
-
Marinus, M.G., and Morris, N.B. (1973) Isolation of deoxyribonucleic acid methylase mutants of Escherichia coli K-12. J Bacteriol 114: 1143-1150.
-
(1973)
J Bacteriol
, vol.114
, pp. 1143-1150
-
-
Marinus, M.G.1
Morris, N.B.2
-
19
-
-
0029079304
-
Binding of purified multiple antibiotic-resistance (MarR) repressor protein to mar operator sequences
-
Martin, R.G., and Rosner, J.L. (1995) Binding of purified multiple antibiotic-resistance (MarR) repressor protein to mar operator sequences. Proc Natl Acad Sci USA 92: 5456-5460.
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 5456-5460
-
-
Martin, R.G.1
Rosner, J.L.2
-
20
-
-
0030664684
-
Fis, an accessorial factor for transcriptional activation of the mar (multiple antibiotic resistance) promoter of Escherichia coli in the presence of the activator MarA, SoxS, or Rob
-
Martin, R.G., and Rosner, J.L. (1997) Fis, an accessorial factor for transcriptional activation of the mar (multiple antibiotic resistance) promoter of Escherichia coli in the presence of the activator MarA, SoxS, or Rob. J Bacteriol 179: 7410-7419.
-
(1997)
J Bacteriol
, vol.179
, pp. 7410-7419
-
-
Martin, R.G.1
Rosner, J.L.2
-
21
-
-
0035067086
-
The AraC transcriptional activators
-
Martin, R.G., and Rosner, J.L. (2001) The AraC transcriptional activators. Curr Opin Microbiol 4: 132-137.
-
(2001)
Curr Opin Microbiol
, vol.4
, pp. 132-137
-
-
Martin, R.G.1
Rosner, J.L.2
-
22
-
-
0036016825
-
Genomics of the marA/soxS/rob regulon of Escherichia coli: Identification of directly activated promoters by application of molecular genetics and informatics to microarray data
-
Martin, R.G., and Rosner, J.L. (2002) Genomics of the marA/soxS/rob regulon of Escherichia coli: identification of directly activated promoters by application of molecular genetics and informatics to microarray data. Mol Microbiol 44: 1611-1624.
-
(2002)
Mol Microbiol
, vol.44
, pp. 1611-1624
-
-
Martin, R.G.1
Rosner, J.L.2
-
23
-
-
0348011833
-
Analysis of microarray data for the marA, soxS, and rob regulons of Escherichia coli
-
Martin, R.G., and Rosner, J.L. (2003) Analysis of microarray data for the marA, soxS, and rob regulons of Escherichia coli. Methods Enzymol 370: 278-280.
-
(2003)
Methods Enzymol
, vol.370
, pp. 278-280
-
-
Martin, R.G.1
Rosner, J.L.2
-
24
-
-
0029029524
-
Regulation of the multiple antibiotic resistance (mar) regulon by marORA sequences in Escherichia coli
-
Martin, R.G., Nyantakyi, P.S., and Rosner, J.L. (1995) Regulation of the multiple antibiotic resistance (mar) regulon by marORA sequences in Escherichia coli. J Bacteriol 177: 4176-4178.
-
(1995)
J Bacteriol
, vol.177
, pp. 4176-4178
-
-
Martin, R.G.1
Nyantakyi, P.S.2
Rosner, J.L.3
-
25
-
-
0030004590
-
Autoactivation of the marRAB multiple antibiotic resistance operon by the MarA transcriptional activator in Escherichia coli
-
Martin, R.G., Jair, K.-W., Wolf, R.E., Jr, and Rosner, J.L. (1996) Autoactivation of the marRAB multiple antibiotic resistance operon by the MarA transcriptional activator in Escherichia coli. J Bacteriol 178: 2216-2223.
-
(1996)
J Bacteriol
, vol.178
, pp. 2216-2223
-
-
Martin, R.G.1
Jair, K.-W.2
Wolf Jr., R.E.3
Rosner, J.L.4
-
26
-
-
0032746803
-
Structural requirements for marbox function in transcriptional activation of mar/sox/rob regulon promoters in Escherichia coli: Sequence, orientation and spatial relationship to the core promoter
-
Martin, R.G., Gillette, W.K., and Rosner, J.L. (1999) Structural requirements for marbox function in transcriptional activation of mar/sox/rob regulon promoters in Escherichia coli: sequence, orientation and spatial relationship to the core promoter. Mol Microbiol 34: 431-441.
-
(1999)
Mol Microbiol
, vol.34
, pp. 431-441
-
-
Martin, R.G.1
Gillette, W.K.2
Rosner, J.L.3
-
27
-
-
0036169321
-
Complex formation between activator and RNA polymerase as the basis for transcriptional activation by MarA and SoxS in Escherichia coli
-
Martin, R.G., Gillette, W.K., Martin, N.I., and Rosner, J.L. (2002) Complex formation between activator and RNA polymerase as the basis for transcriptional activation by MarA and SoxS in Escherichia coli. Mol Microbiol 43: 355-370.
-
(2002)
Mol Microbiol
, vol.43
, pp. 355-370
-
-
Martin, R.G.1
Gillette, W.K.2
Martin, N.I.3
Rosner, J.L.4
-
28
-
-
0003785155
-
-
Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press
-
Miller, J.H. (1972) Experiments in Molecular Genetics. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
-
(1972)
Experiments in Molecular Genetics
-
-
Miller, J.H.1
-
29
-
-
0034977251
-
Genome-wide transcriptional profiling of the Escherichia coli responses to superoxide stress and sodium salicylate
-
Pomposiello, P.J., Bennik, M.H.J., and Demple, B. (2001) Genome-wide transcriptional profiling of the Escherichia coli responses to superoxide stress and sodium salicylate. J Bacteriol 183: 3890-3902.
-
(2001)
J Bacteriol
, vol.183
, pp. 3890-3902
-
-
Pomposiello, P.J.1
Bennik, M.H.J.2
Demple, B.3
-
30
-
-
0027952572
-
Influence of translational efficiency on the stability of the mRNA for ribosomal protein S20 in Escherichia coli
-
Rapaport, L.R., and Mackie, G.A. (1994) Influence of translational efficiency on the stability of the mRNA for ribosomal protein S20 in Escherichia coli. J Bacteriol 176: 992-998.
-
(1994)
J Bacteriol
, vol.176
, pp. 992-998
-
-
Rapaport, L.R.1
Mackie, G.A.2
-
31
-
-
0032169864
-
A novel DNA-binding motif in MarA: The first structure for an AraC family transcriptional activator
-
Rhee, S.R., Martin, R.G., Rosner, J.L., and Davies, D.R. (1998) A novel DNA-binding motif in MarA: the first structure for an AraC family transcriptional activator. Proc Natl Acad Sci USA 95: 10413-10418.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 10413-10418
-
-
Rhee, S.R.1
Martin, R.G.2
Rosner, J.L.3
Davies, D.R.4
-
32
-
-
0026532777
-
Translation initiation in Escherichia coli: Sequences within the ribosome-binding site
-
Ringquist, S., Shinedling, S., Barrick, D., Green, L., Binkley, J., Stormo, G.D., and Gold, L. (1992) Translation initiation in Escherichia coli: sequences within the ribosome-binding site. Mol Microbiol 6: 1219-1229.
-
(1992)
Mol Microbiol
, vol.6
, pp. 1219-1229
-
-
Ringquist, S.1
Shinedling, S.2
Barrick, D.3
Green, L.4
Binkley, J.5
Stormo, G.D.6
Gold, L.7
-
33
-
-
0028073382
-
Dual regulation of inaA by the multiple antibiotic resistance (Mar) and superoxide (SoxRS) stress response systems of Escherichia coli
-
Rosner, J.L., and Slonczewski, J.L. (1994) Dual regulation of inaA by the multiple antibiotic resistance (Mar) and superoxide (SoxRS) stress response systems of Escherichia coli. J Bacteriol 176: 6262-6269.
-
(1994)
J Bacteriol
, vol.176
, pp. 6262-6269
-
-
Rosner, J.L.1
Slonczewski, J.L.2
-
34
-
-
0004136246
-
-
Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press
-
Sambrook, J., Maniatis, T., and Fritsch, E.F. (1989) Molecular Cloning: A Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
-
(1989)
Molecular Cloning: A Laboratory Manual, 2nd Edn.
-
-
Sambrook, J.1
Maniatis, T.2
Fritsch, E.F.3
-
35
-
-
0029025536
-
Characterization of MarR, the repressor of the multiple antibiotic resistance (mar) operon in Escherichia coli
-
Seoane, A.S., and Levy, S.B. (1995) Characterization of MarR, the repressor of the multiple antibiotic resistance (mar) operon in Escherichia coli. J Bacteriol 177: 3414-3419.
-
(1995)
J Bacteriol
, vol.177
, pp. 3414-3419
-
-
Seoane, A.S.1
Levy, S.B.2
-
36
-
-
0016154301
-
The 3′-terminal sequence of Escherichia coli 16S ribosomal RNA: Complementarity to nonsense triplets and ribosome binding sites
-
Shine, J., and Dalgarno, L. (1974) The 3′-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites. Proc Natl Acad Sci USA 71: 1342-1346.
-
(1974)
Proc Natl Acad Sci USA
, vol.71
, pp. 1342-1346
-
-
Shine, J.1
Dalgarno, L.2
-
37
-
-
0035850734
-
Anatomy of Escherichia coli ribosome binding sites
-
Shultzaberger, R.K., Bucheimer, R.E., Rudd, K.E., and Schneider, T.D. (2001) Anatomy of Escherichia coli ribosome binding sites. J Mol Biol 313: 215-228.
-
(2001)
J Mol Biol
, vol.313
, pp. 215-228
-
-
Shultzaberger, R.K.1
Bucheimer, R.E.2
Rudd, K.E.3
Schneider, T.D.4
-
38
-
-
0023255472
-
Improved single copy and multicopy lac-based cloning vectors for protein and operon fusions
-
Simons, R.W., Houman, F., and Kleckner, N. (1987) Improved single copy and multicopy lac-based cloning vectors for protein and operon fusions. Gene 53: 85-96.
-
(1987)
Gene
, vol.53
, pp. 85-96
-
-
Simons, R.W.1
Houman, F.2
Kleckner, N.3
-
39
-
-
0028036559
-
Control of translation by mRNA secondary structure in Escherichia coli. A quantitative analysis of literature data
-
de Smit, M.H., and van Duin, J. (1994) Control of translation by mRNA secondary structure in Escherichia coli. A quantitative analysis of literature data. J Mol Biol 244: 144-150.
-
(1994)
J Mol Biol
, vol.244
, pp. 144-150
-
-
De Smit, M.H.1
Van Duin, J.2
-
40
-
-
0026663105
-
Interdependence of translation, transcription and mRNA degradation in the lacZ gene
-
Yarchuk, O., Jacques, N., Guillerez, J., and Dreyfus, M. (1992) Interdependence of translation, transcription and mRNA degradation in the lacZ gene. J Mol Biol 226: 581-596.
-
(1992)
J Mol Biol
, vol.226
, pp. 581-596
-
-
Yarchuk, O.1
Jacques, N.2
Guillerez, J.3
Dreyfus, M.4
-
41
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
Zuker, M. (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 31: 3406-3415.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3406-3415
-
-
Zuker, M.1
|