-
1
-
-
0035013633
-
Molecular architecture of full-length KcsA: Role of cytoplasmic domains in ion permeation and activation gating
-
Auth, D. M., Cortes, Cuello, L. G. and Perozo, E. (2001). Molecular architecture of full-length KcsA: role of cytoplasmic domains in ion permeation and activation gating. J. Gen. Physiol. 117: 165-80.
-
(2001)
J. Gen. Physiol.
, vol.117
, pp. 165-180
-
-
Auth, D.M.1
Cortes2
Cuello, L.G.3
Perozo, E.4
-
2
-
-
0029916915
-
The PROSITE database
-
Bairoch, A. (1996). The PROSITE database. Nucleic Acid Res. 24: 189-96.
-
(1996)
Nucleic Acid Res.
, vol.24
, pp. 189-196
-
-
Bairoch, A.1
-
3
-
-
0037079576
-
The elastic net algorithm and protein structure prediction
-
Ball, K. D., Erman, B. and Dill, K. A. (2002). The elastic net algorithm and protein structure prediction. J. Comput. Chem. 23: 77-83.
-
(2002)
J. Comput. Chem.
, vol.23
, pp. 77-83
-
-
Ball, K.D.1
Erman, B.2
Dill, K.A.3
-
4
-
-
3042806532
-
Introduction: P2 receptors
-
Burnstock, G. (2004). Introduction: P2 receptors. Curr. Top. Med. Chem. 4: 793-803.
-
(2004)
Curr. Top. Med. Chem.
, vol.4
, pp. 793-803
-
-
Burnstock, G.1
-
6
-
-
0036891697
-
Long membrane helices and short loops predicted less accurately
-
Chen, C. P. and Rost, B. (2002a). Long membrane helices and short loops predicted less accurately. Protein Sci. 11: 2766-73.
-
(2002)
Protein Sci.
, vol.11
, pp. 2766-2773
-
-
Chen, C.P.1
Rost, B.2
-
7
-
-
0001911218
-
State-of-the-art in membrane protein predictions
-
Chen, C. P. and Rost, B. (2002b). State-of-the-art in membrane protein predictions. Appl. Bioinformatics 1: 21-35.
-
(2002)
Appl. Bioinformatics
, vol.1
, pp. 21-35
-
-
Chen, C.P.1
Rost, B.2
-
8
-
-
0036893269
-
Transmembrane helix predictions revisited
-
Chen, C. P., Kernytsky, A. and Rost, B. (2002). Transmembrane helix predictions revisited. Protein Sci. 11: 2774-91.
-
(2002)
Protein Sci.
, vol.11
, pp. 2774-2791
-
-
Chen, C.P.1
Kernytsky, A.2
Rost, B.3
-
9
-
-
0037095757
-
Mutational analysis of the conserved cysteines of the rat P2X2 purinoceptor
-
Clyne, J. D., Wang, L.-F. and Hume, R. I. (2002). Mutational analysis of the conserved cysteines of the rat P2X2 purinoceptor. J. Neurosci. 22: 3873-80.
-
(2002)
J. Neurosci.
, vol.22
, pp. 3873-3880
-
-
Clyne, J.D.1
Wang, L.-F.2
Hume, R.I.3
-
11
-
-
0036154216
-
Conserved cysteine residues in the extracellular loop of the human P2X1 receptor form disulfide bonds and are involved in receptor trafficking to the cell surface
-
Ennion S. J. and Evans, R. J. (2002). Conserved cysteine residues in the extracellular loop of the human P2X1 receptor form disulfide bonds and are involved in receptor trafficking to the cell surface. Mol. Pharmacol. 61: 303-11.
-
(2002)
Mol. Pharmacol.
, vol.61
, pp. 303-311
-
-
Ennion, S.J.1
Evans, R.J.2
-
12
-
-
0036084361
-
The PROSITE database, its status in 2002
-
Falquet, L., Pagni, M., Bucher, P., Hulo, N., Sigrist, C. J., Hofmann, K. and Bairoch, A. (2002). The PROSITE database, its status in 2002. Nucl. Acids Res. 30:235-8.
-
(2002)
Nucl. Acids Res.
, vol.30
, pp. 235-238
-
-
Falquet, L.1
Pagni, M.2
Bucher, P.3
Hulo, N.4
Sigrist, C.J.5
Hofmann, K.6
Bairoch, A.7
-
13
-
-
0033566578
-
The role of evolutionary information in predicting the disulfide-bonding state of cysteines in proteins
-
Fariselli, P., Riccobelli, P. and Casadio, R. (1999). The role of evolutionary information in predicting the disulfide-bonding state of cysteines in proteins. Proteins 36: 340-6.
-
(1999)
Proteins
, vol.36
, pp. 340-346
-
-
Fariselli, P.1
Riccobelli, P.2
Casadio, R.3
-
14
-
-
0031668776
-
ATP binding site of P2X channel proteins: Structural similarities with class II aminoacyl-tRNA synthetases
-
Freist, W., Verhey, J. F., Stuhmer, W. and Gaus, D. H. (1998). ATP binding site of P2X channel proteins: structural similarities with class II aminoacyl-tRNA synthetases. FEBS Lett. 434: 61-5.
-
(1998)
FEBS Lett.
, vol.434
, pp. 61-65
-
-
Freist, W.1
Verhey, J.F.2
Stuhmer, W.3
Gaus, D.H.4
-
15
-
-
0038386050
-
3-D Jury: A simple approach to improve protein structure predictions
-
Ginalski, E., Elofsson, A., Fischer, D. and Rychlewski, L. (2003). 3-D Jury: a simple approach to improve protein structure predictions. Bioinformatics 19:1015-8.
-
(2003)
Bioinformatics
, vol.19
, pp. 1015-1018
-
-
Ginalski, E.1
Elofsson, A.2
Fischer, D.3
Rychlewski, L.4
-
16
-
-
0037307081
-
Molecular modeling of ion channels: Structural predictions
-
Giorgetti, A. and Carloni, P. (2003). Molecular modeling of ion channels: structural predictions. Curr. Opin. Chem. Biol. 7: 150-6.
-
(2003)
Curr. Opin. Chem. Biol.
, vol.7
, pp. 150-156
-
-
Giorgetti, A.1
Carloni, P.2
-
17
-
-
0037012653
-
P2X4 receptor is a glycosylated cardiac receptor mediating a positive inotropic response to ATP
-
Hu, B., Senkler, C., Yang, A., Soto, F. and Liang, B. T. (2002). P2X4 receptor is a glycosylated cardiac receptor mediating a positive inotropic response to ATP. J. Biol. Chem. 277: 15752-7.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 15752-15757
-
-
Hu, B.1
Senkler, C.2
Yang, A.3
Soto, F.4
Liang, B.T.5
-
18
-
-
0346727217
-
Molecular physiology of P2 receptors in the central nervous system
-
Illes, P. and Ribeiro, J. (2004). Molecular physiology of P2 receptors in the central nervous system. Eur. J. Pharmacol. 483: 5-17.
-
(2004)
Eur. J. Pharmacol.
, vol.483
, pp. 5-17
-
-
Illes, P.1
Ribeiro, J.2
-
19
-
-
0035287474
-
Molecular physiology of P2X receptors and ATP signalling at synapses
-
Khakh, B. S. (2001). Molecular physiology of P2X receptors and ATP signalling at synapses. Nat. Rev. Neurosci. 2: 165-74.
-
(2001)
Nat. Rev. Neurosci.
, vol.2
, pp. 165-174
-
-
Khakh, B.S.1
-
20
-
-
0035890154
-
Proteomic and functional evidence for a P2X7 receptor signalling complex
-
Kim, M., Jiang, L.-H., Wilson, H. L., North, R. A. and Surprenant, A. (2001). Proteomic and functional evidence for a P2X7 receptor signalling complex. EMBO J. 20: 6347-58.
-
(2001)
EMBO J.
, vol.20
, pp. 6347-6358
-
-
Kim, M.1
Jiang, L.-H.2
Wilson, H.L.3
North, R.A.4
Surprenant, A.5
-
21
-
-
0030589514
-
Phi-Psi-chology: Ramachandran Revisited
-
Kleywegt, G. J. and Jones, T. A. (1996) Phi-Psi-chology: Ramachandran Revisited. Structure 4:1395-400.
-
(1996)
Structure
, vol.4
, pp. 1395-1400
-
-
Kleywegt, G.J.1
Jones, T.A.2
-
22
-
-
18744396365
-
P2X and P2Y receptors as possible targets of therapeutic manipulations in CNS illness
-
Köles, L., Fürst, S. and Illes, P. (2005). P2X and P2Y receptors as possible targets of therapeutic manipulations in CNS illness. Drug News Perspect. 18: 1-17.
-
(2005)
Drug News Perspect.
, vol.18
, pp. 1-17
-
-
Köles, L.1
Fürst, S.2
Illes, P.3
-
24
-
-
0034663722
-
The penultimate rotamer library
-
Lovell, S. C., Word, J. M., Richardson, J. S. and Richardson, D. C. (2000). The penultimate rotamer library. Proteins 40: 389-408.
-
(2000)
Proteins
, vol.40
, pp. 389-408
-
-
Lovell, S.C.1
Word, J.M.2
Richardson, J.S.3
Richardson, D.C.4
-
25
-
-
0037441653
-
Structure validation by C-alpha geometry: phi, psi, and C-beta deviation
-
Lovell, C. S., Davis, I. W., Arendall, W. B., De Bakker, P. I. W., Word, J. M., Prisant, M. G., Richardson, J. S. and Richardson, D. C. (2003). Structure validation by C-alpha geometry: phi, psi, and C-beta deviation. Proteins 50: 437-50.
-
(2003)
Proteins
, vol.50
, pp. 437-450
-
-
Lovell, C.S.1
Davis, I.W.2
Arendall, W.B.3
De Bakker, P.I.W.4
Word, J.M.5
Prisant, M.G.6
Richardson, J.S.7
Richardson, D.C.8
-
26
-
-
10644241979
-
Bridging the gap between structural bioinformatics and receptor research: The membrane-embedded, ligand-gated, P2X glycoprotein receptor
-
Mager, P. P., Weber, A. and Illes, P. (2004). Bridging the gap between structural bioinformatics and receptor research: the membrane-embedded, ligand-gated, P2X glycoprotein receptor. Curr. Topics Med. Chem.4: 1657-705.
-
(2004)
Curr. Topics Med. Chem.
, vol.4
, pp. 1657-1705
-
-
Mager, P.P.1
Weber, A.2
Illes, P.3
-
27
-
-
31144465703
-
Quantitative structure-activity relationship analysis of the cation permeability of the P2X2 channel
-
Mager, P. P., Weber, A. and Illes, P. (2005a). Quantitative structure-activity relationship analysis of the cation permeability of the P2X2 channel. Med. Chem. 1: 109-15.
-
(2005)
Med. Chem.
, vol.1
, pp. 109-115
-
-
Mager, P.P.1
Weber, A.2
Illes, P.3
-
28
-
-
31144448632
-
The monomers of the P2X1 receptor model and KcsA protein share a similar structural fold
-
Mager, P. P., Weber, A., Sanchez, L., Wirkner, K. and Illes, P. (2005b). The monomers of the P2X1 receptor model and KcsA protein share a similar structural fold. Protein Pept. Lett. 13(1): 77-81.
-
(2005)
Protein Pept. Lett.
, vol.13
, Issue.1
, pp. 77-81
-
-
Mager, P.P.1
Weber, A.2
Sanchez, L.3
Wirkner, K.4
Illes, P.5
-
29
-
-
0033755889
-
Neuronal P2X receptors: Localisation and functional properties
-
Norenberg, W. and Illes, P. (2000). Neuronal P2X receptors: localisation and functional properties. Naunyn Schmiedebergs Arch. Pharmacol. 362: 324-39.
-
(2000)
Naunyn Schmiedebergs Arch. Pharmacol.
, vol.362
, pp. 324-339
-
-
Norenberg, W.1
Illes, P.2
-
30
-
-
0036788971
-
Molecular physiology of P2X receptors
-
North, R. A. (2002). Molecular physiology of P2X receptors. Physiol. Rev. 82: 1013-67.
-
(2002)
Physiol. Rev.
, vol.82
, pp. 1013-1067
-
-
North, R.A.1
-
32
-
-
0036568279
-
Improving the prediction of protein secondary structure in three and eight classes using recurrent neural networks and profile
-
Pollastri, G., Przybylski, D., Rost, B. and Baldi, P. (2002). Improving the prediction of protein secondary structure in three and eight classes using recurrent neural networks and profile. Proteins 47: 228-35.
-
(2002)
Proteins
, vol.47
, pp. 228-235
-
-
Pollastri, G.1
Przybylski, D.2
Rost, B.3
Baldi, P.4
-
33
-
-
0035782925
-
Protein secondary structure prediction continues to rise
-
Rost, B. (2001). Protein secondary structure prediction continues to rise. J. Struct. Biol. 134: 204-18.
-
(2001)
J. Struct. Biol.
, vol.134
, pp. 204-218
-
-
Rost, B.1
-
34
-
-
0028300741
-
Combining evolutionary information and neural networks to predict protein secondary structure
-
Rost, B. and Sander, C. (1994). Combining evolutionary information and neural networks to predict protein secondary structure. Proteins 19: 55-72.
-
(1994)
Proteins
, vol.19
, pp. 55-72
-
-
Rost, B.1
Sander, C.2
-
35
-
-
0028841033
-
A prokyryotic potassium ion channel with two predicted transmembrane segments from Streptomyces lividans
-
Schrempf, H., Schmidt, O., Kuemmerlen, R., Hinnah, S., Mueller, D., Betzler, M., Steinkamp, T. and Wagner, R. (1995). A prokyryotic potassium ion channel with two predicted transmembrane segments from Streptomyces lividans. EMBO J. 14: 5170-8.
-
(1995)
EMBO J.
, vol.14
, pp. 5170-5178
-
-
Schrempf, H.1
Schmidt, O.2
Kuemmerlen, R.3
Hinnah, S.4
Mueller, D.5
Betzler, M.6
Steinkamp, T.7
Wagner, R.8
-
36
-
-
15744376891
-
Molecular determinants of the agonist binding domain of a P2X receptor channel
-
Yan, Z., Liang, Z., Tomic, M., Obasil, T. and Stojilkovic, S. S. (2005). Molecular determinants of the agonist binding domain of a P2X receptor channel. Mol. Pharmacol. 67: 1078-88.
-
(2005)
Mol. Pharmacol.
, vol.67
, pp. 1078-1088
-
-
Yan, Z.1
Liang, Z.2
Tomic, M.3
Obasil, T.4
Stojilkovic, S.S.5
|