An amelogenin minigene to study alternative splicing

DNA and Cell Biology

Volumn 25, Issue 1, 2006, Pages 1-5

  Shapiro, Jason L ^a   Wang, Hongjun ^a   Wen, Xin ^a   Tannukit, Sissada ^a   Paine, Michael L ^a  

^a UNIVERSITY OF SOUTHERN CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMELOGENIN; GENOMIC DNA; MATRIX PROTEIN; MESSENGER RNA;

ALTERNATIVE RNA SPLICING; ARTICLE; DNA SEQUENCE; DNA TEMPLATE; EXON; GENE AMPLIFICATION; GENE EXPRESSION; GENETIC VARIABILITY; MOLECULAR CLONING; MOUSE; NONHUMAN; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RNA TRANSCRIPTION;

ALTERNATIVE SPLICING; AMELOGENIN; AMINO ACID SEQUENCE; ANIMALS; CELL LINE; CLONING, MOLECULAR; DENTAL ENAMEL PROTEINS; EXONS; MICE; MOLECULAR SEQUENCE DATA; RNA PRECURSORS; SEQUENCE ALIGNMENT;

EID: 30644456404     PISSN: 10445498     EISSN: None     Source Type: Journal    
DOI: 10.1089/dna.2006.25.1     Document Type: Article

References (22)

1. BOABAID, F., GIBSON, C.W., KUEHL, M.A., BERRY, J.E., SNEAD, M.L., NOCITI, F.H.J., KATCHBURIAN, E., and SOMERMAN, M.J. (2004). Leucine-rich amelogenin peptide: A candidate signaling molecule during cementogenesis. J. Periodontol. 75, 1126-1136.
2. BOYAN, B.D., WEESNER, T.C., LOHMANN, C.H., ANDREACCHIO, D., GARNES, D.L., DEAN, D.D., COCHRAN, D.L., and SCHWARTZ, Z. (2000). Porcine fetal enamel matrix derivative enhances bone formation induced by demineralized freeze dried bone allograft in vivo. J. Periodontol. 71, 1278-1286.
3. BRINKMAN, B.M. (2004). Splice variants as cancer biomarkers. Clin. Biochem. 37, 584-594.
4. DHAMIJA, S., and KREBSBACH, P.H. (2001). Role of Cbfa1 in ameloblastin gene transcription. J. Biol. Chem. 276, 35159-35164.
5. HERRLICH, P., SLEEMAN, J., WAINWRIGHT, D., KONIG, H., SHERMAN, L., HILBERG, F., and PONTA, H. (1998). How tumor cells make use of CD44. Cell Adhes. Commun. 6, 141-147.
6. HU, C.C., RYU, O.H., YAMAKOSHI, Y., ZHANG, C.H., CAO, X., QIAN, Q., and SIMMER, J.P. (2002). Pig amelogenin gene expresses a unique exon 4. Connect. Tissue Res. 43(2-3), 435-40.
7. KALNINA, Z., ZAYAKIN, P., SILINA, K., and LINE, A. (2005). Alterations of pre-mRNA splicing in cancer. Genes Chromosomes Cancer 42, 342-357.
8. KARLIN, S., and ALTSCHUL, S.F. (1990). Methods for assessing statistical significance of molecular sequence features by using general scoring schemes. Proc. Natl. Acad. Sci. USA 87, 2264-2268.
9. KAWANA, F., SAWAE, Y., SAHARA, T., TANAKA, S., DEBARI, K., SHIMIZU, M., and SASAKI, T. (2001). Porcine enamel matrix derivative enhances trabecular bone regeneration during wound healing of injured rat femur. Anat Rec. 264, 438-446.
10. PAINE, M.L., ZHU, D.H., LUO, W., BRINGAS, P.J., GOLDBERG, M., WHITE, S.N., LEI, Y.P., SARIKAYA, M., FONG, H.K., and SNEAD, M.L. (2000). Enamel biomineralization defects result from alterations to amelogenin self-assembly. J. Struct. Biol. 132, 191-200.
11. PAPAGERAKIS, P., IBARRA, J.M., INOZENTSEVA, N., DENBESTEN, P., and MACDOUGALL, M. (2005). Mouse amelogenin exons 8 and 9: Sequence analysis and protein distribution. J. Dent. Res. 84, 613-7.
12. PONTA, H., SHERMAN, L., and HERRLICH, P.A. (2003). CD44: From adhesion molecules to signalling regulators. Nat. Rev. Mol. Cell. Biol. 4, 33-45.
13. SAMBROOK, J., and RUSSELL, D.W. (2001). Molecular Cloning: A Laboratory Manual. (Cold Spring Harbor Laboratory Press, New York).
14. SIMMER, J.P., and SNEAD, M.L. (1995). Molecular biology of the amelogenin gene. In Dental Enamel: Formation to Destruction. C. Robinson, J. Kirkham, and R. Shore, eds. (CRC Press, Boca Raton, FL) p. 59-84.
15. SIMMER, P.J., LAU, E.C., HU, C.C., MORADIAN-OLDAK, J., SARTE, P.E., SLAVKIN, H.C., and FINCHAM, A.G. (1994). Alternative splicing of the amelogenin primary RNA transcript in mice. Calcif. Tissue Int. 55, 302-310.
16. SMITH, C. (1998). Cellular and chemical events during enamel maturation. Crit. Rev. Oral Biol. Med. 9, 128-161.
17. STOSS, O., STOILOV, P., HARTMANN, A.M., NAYLER, O., and STAMM, S. (1999). The in vivo minigene approach to analyze tissue-specific splicing. Brain Res. Brain Res. Protoc. 4, 383-94.
18. TOMPKINS, K., and VEIS, A. (2002). Polypeptides translated from alternatively spliced transcripts of the amelogenin gene, devoid of the exon 6a, b, c region, have specific effects on tooth germ development in culture. Connect. Tissue Res. 43(2-3), 224-31.
19. VEIS, A. (2003). Amelogenin gene splice products: Potential signaling molecules. Cell. Mol. Life Sci. 60, 38-55.
20. VENABLES, J.P. (2004). Aberrant and alternative splicing in cancer. Cancer Res. 64, 7647-7654.
21. VISWANATHAN, H.L., BERRY, J.E., FOSTER, B.L., GIBSON, C.W., LI, Y., KULKARNI, A.B., SNEAD, M.L., and SOMERMAN, M.J. (2003). Amelogenin: A potential regulator of cementum-associated genes. J. Periodontol. 74, 1423-1431.
22. ZHOU, Y.L., and SNEAD, M.L. (2000). Identification of CCAAT/enhancer-binding protein alpha as a transactivator of the mouse amelogenin gene. J. Biol. Chem. 275, 12273-12280.