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Volumn 34, Issue 4, 2004, Pages 407-420

On the classes of aminoacyl-tRNA synthetases, amino acids and the genetic code

Author keywords

AAIndex; aaRS; amino acids; discrimination; genetic code; principal component analysis

Indexed keywords

AMINO ACID; AMINO ACID TRANSFER RNA LIGASE;

EID: 3042803190     PISSN: 01696149     EISSN: None     Source Type: Journal    
DOI: 10.1023/B:ORIG.0000029881.14519.42     Document Type: Article
Times cited : (21)

References (23)
  • 1
    • 0034616450 scopus 로고    scopus 로고
    • On the Classes of Aminoacyl-tRNA Synthetases and the Error Minimization in the Genetic Code
    • Cavalcanti, A. R. O., Barros Neto, B. and Ferreira, R.: 2000, On the Classes of Aminoacyl-tRNA Synthetases and the Error Minimization in the Genetic Code, J. Theor. Biol. 204, 15-20.
    • (2000) J. Theor. Biol. , vol.204 , pp. 15-20
    • Cavalcanti, A.R.O.1    Barros Neto, B.2    Ferreira, R.3
  • 2
    • 0031456444 scopus 로고    scopus 로고
    • Aminoacyl-tRNA Synthetases
    • Cusack, S.: 1997, Aminoacyl-tRNA Synthetases, Curr. Op. Struct. Biol. 7, 881-889
    • (1997) Curr. Op. Struct. Biol. , vol.7 , pp. 881-889
    • Cusack, S.1
  • 3
    • 0025043116 scopus 로고
    • A Second Class of Synthetase Structure Revealed by X-ray Analysis of Escherichia coli Seryl-tRNA Synthetase at 2.5 A
    • Cusack, S., Berthet-Colominas. C., Härtlein, M., Nassar, N. and Leberman, R.: 1990, A Second Class of Synthetase Structure Revealed by X-ray Analysis of Escherichia coli Seryl-tRNA Synthetase at 2.5 A, Nature 347, 249-255.
    • (1990) Nature , vol.347 , pp. 249-255
    • Cusack, S.1    Berthet-Colominas, C.2    Härtlein, M.3    Nassar, N.4    Leberman, R.5
  • 4
    • 0025158208 scopus 로고
    • Partition of tRNA Synthetases into Two Classes Based on Mutually Exclusive Sets of Sequence Motif
    • Eriani, G., Delarue, M., Poch, O., Gangloff, J. and Moras, D.: 1990, Partition of tRNA Synthetases into Two Classes Based on Mutually Exclusive Sets of Sequence Motif, Nature 347, 203-206.
    • (1990) Nature , vol.347 , pp. 203-206
    • Eriani, G.1    Delarue, M.2    Poch, O.3    Gangloff, J.4    Moras, D.5
  • 5
    • 0028965837 scopus 로고
    • The Class II Aminoacyl-tRNA Synthetases and their Active Site: Evolutionary Conservation of an ATP Binding Site
    • Eriani, G., Cavarelli, J., Martin, F., Ador, L., Rees, B., Thierry, J. C., Gangloff, J. and Moras, D.: 1995, The Class II Aminoacyl-tRNA Synthetases and their Active Site: Evolutionary Conservation of an ATP Binding Site, J. Mol. Evol. 40, 499-508.
    • (1995) J. Mol. Evol. , vol.40 , pp. 499-508
    • Eriani, G.1    Cavarelli, J.2    Martin, F.3    Ador, L.4    Rees, B.5    Thierry, J.C.6    Gangloff, J.7    Moras, D.8
  • 6
    • 0000399236 scopus 로고
    • Obtaining Common Pruned Trees
    • Finden, C. R. and Gordon, A. D.: 1985, Obtaining Common Pruned Trees, J. Classif. 2, 255-276.
    • (1985) J. Classif. , vol.2 , pp. 255-276
    • Finden, C.R.1    Gordon, A.D.2
  • 7
    • 0031662136 scopus 로고    scopus 로고
    • The Genetic Code is One in a Million
    • Freeland, S. J. and Hurst, E. D.: 1998, The Genetic Code is One in a Million, J. Mol. Evol. 47, 238-248.
    • (1998) J. Mol. Evol. , vol.47 , pp. 238-248
    • Freeland, S.J.1    Hurst, E.D.2
  • 8
    • 0026327996 scopus 로고
    • A Quantitative Measure of Error-minimization in the Genetic Code
    • Haig, D. and Hurst, L. D.: 1991, A Quantitative Measure of Error-minimization in the Genetic Code, J. Mol. Evol. 33, 412-417.
    • (1991) J. Mol. Evol. , vol.33 , pp. 412-417
    • Haig, D.1    Hurst, L.D.2
  • 9
    • 0028943076 scopus 로고
    • Structure, Function and Evolution of Seryl-tRNA Synthetases: Implications for the Evolution of Aminoacyl-tRNA Synthetases and the Genetic Code
    • Härtlein, M. and Cusack, S.: 1995, Structure, Function and Evolution of Seryl-tRNA Synthetases: Implications for the Evolution of Aminoacyl-tRNA Synthetases and the Genetic Code, J. Mol. Evol. 40, 519-530.
    • (1995) J. Mol. Evol. , vol.40 , pp. 519-530
    • Härtlein, M.1    Cusack, S.2
  • 11
  • 12
    • 0033152412 scopus 로고    scopus 로고
    • Selection, History and Chemistry: The Three Faces of the Genetic Code
    • Knight, R. D., Freeland, S. J. and Landweber, L. F.: 1999, Selection, History and Chemistry: The Three Faces of the Genetic Code, Trends Biochem. Sci. 24(6), 241-247.
    • (1999) Trends Biochem. Sci. , vol.24 , Issue.6 , pp. 241-247
    • Knight, R.D.1    Freeland, S.J.2    Landweber, L.F.3
  • 13
    • 0018415510 scopus 로고
    • Two Types of Amino Acid Substitution in Protein Evolution
    • Miyata, T., Miyzawa, S. and Yasunaga, T.: 1979, Two Types of Amino Acid Substitution in Protein Evolution, J. Mol. Evol. 12, 219-236.
    • (1979) J. Mol. Evol. , vol.12 , pp. 219-236
    • Miyata, T.1    Miyzawa, S.2    Yasunaga, T.3
  • 14
    • 0028969559 scopus 로고
    • Phylogenetic Analysis of the Aminoacyl-tRNA Synthetases
    • Nagel, G. M. and Doolittle, R. F.: 1995, Phylogenetic Analysis of the Aminoacyl-tRNA Synthetases, J. Mol. Evol. 40, 487-498.
    • (1995) J. Mol. Evol. , vol.40 , pp. 487-498
    • Nagel, G.M.1    Doolittle, R.F.2
  • 15
    • 0028969558 scopus 로고
    • Searching tRNA Sequences for Relatedness to Aminoacyl-tRNA Synthetases Families
    • Nicholas, H. B. and McClain, W.: 1995, Searching tRNA Sequences for Relatedness to Aminoacyl-tRNA Synthetases Families, J. Mol. Evol. 40, 482-486.
    • (1995) J. Mol. Evol. , vol.40 , pp. 482-486
    • Nicholas, H.B.1    McClain, W.2
  • 17
    • 0002393841 scopus 로고
    • The Use of Tree Comparison Metrics
    • Penny, D. and Hendy, M. D.: 1985, The Use of Tree Comparison Metrics, Syst. Zool. 34, 75-82.
    • (1985) Syst. Zool. , vol.34 , pp. 75-82
    • Penny, D.1    Hendy, M.D.2
  • 18
    • 0035951403 scopus 로고    scopus 로고
    • Two Classes of tRNA Synthetases Suggested by Sterically Compatible Dockings on tRNA Acceptor Stem
    • Pouplana, L. R. and Schimmel, P.: 2001a, Two Classes of tRNA Synthetases Suggested by Sterically Compatible Dockings on tRNA Acceptor Stem, Cell 104, 191-193.
    • (2001) Cell , vol.104 , pp. 191-193
    • Pouplana, L.R.1    Schimmel, P.2
  • 19
    • 0035478911 scopus 로고    scopus 로고
    • Aminoacyl-tRNA Synthetases: Potential Markers of Genetic Code Development
    • Pouplana, L. R. and Schimmel, P.: 2001b, Aminoacyl-tRNA Synthetases: Potential Markers of Genetic Code Development, Trends Biochem. Sci. 26, 591-596.
    • (2001) Trends Biochem. Sci. , vol.26 , pp. 591-596
    • Pouplana, L.R.1    Schimmel, P.2
  • 20
    • 0034835280 scopus 로고    scopus 로고
    • Structure Based Phylogeny of Class IIa tRNA Synthetases in Relation to an Unusual Biochemistry
    • Pouplana, L. R., Brown, J. R. and Schimmel, P.: 2001, Structure Based Phylogeny of Class IIa tRNA Synthetases in Relation to an Unusual Biochemistry, J. Mol. Evol. 53, 261-268.
    • (2001) J. Mol. Evol. , vol.53 , pp. 261-268
    • Pouplana, L.R.1    Brown, J.R.2    Schimmel, P.3
  • 21
    • 0032513368 scopus 로고    scopus 로고
    • Evolution of a Transfer RNA Gene Through a Point Mutation in the Anticodon
    • Saks, M. E., Sampson, J. R. and Abelson, J.: 1998, Evolution of a Transfer RNA Gene Through a Point Mutation in the Anticodon, Science 279, 1665-1670.
    • (1998) Science , vol.279 , pp. 1665-1670
    • Saks, M.E.1    Sampson, J.R.2    Abelson, J.3
  • 23
    • 0029922443 scopus 로고    scopus 로고
    • Analysis of Amino Acid Indices and Mutation Matrices for Sequence Comparison and Structure Prediction of Proteins
    • Tomii, K. and Kanehisa, M.: 1996, Analysis of Amino Acid Indices and Mutation Matrices for Sequence Comparison and Structure Prediction of Proteins, Protein Eng. 9, 27-36.
    • (1996) Protein Eng. , vol.9 , pp. 27-36
    • Tomii, K.1    Kanehisa, M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.