Phylogeny of the Falconidae (Aves): A comparison of the efficacy of morphological, mitochondrial, and nuclear data

Molecular Phylogenetics and Evolution

Volumn 32, Issue 1, 2004, Pages 101-109

  Griffiths, Carole S ^a,b   Barrowclough, George F ^b   Groth, Jeff G ^b   Mertz, Lisa ^b  

^a LONG ISLAND UNIVERSITY   (United States)

^b DIVISION OF INVERTEBRATE ZOOLOGY   (United States)

Author keywords

Aves; Falconidae; mtDNA; Multiple data sets; Phylogenetics; RAG 1

Indexed keywords

CYTOCHROME B; DNA; MITOCHONDRIAL DNA;

ANIMAL; ARTICLE; BIRD; CELL NUCLEUS; CODON; DNA SEQUENCE; EXON; GENE; GENETIC VARIABILITY; GENETICS; METABOLISM; PHYLOGENY; TIME;

ANIMALS; BIRDS; CELL NUCLEUS; CODON; CYTOCHROMES B; DNA; DNA, MITOCHONDRIAL; EXONS; GENES, RAG-1; PHYLOGENY; SEQUENCE ANALYSIS, DNA; TIME FACTORS; VARIATION (GENETICS);

AVES; FALCONIDAE; GALLIFORMES; MICRASTUR;

EID: 3042703129     PISSN: 10557903     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ympev.2003.11.019     Document Type: Article

References (23)

1. Barker F.K, Barrowclough G.F, Groth J.G. A phylogenetic hypothesis for passerine birds: taxonomic and biogeographic implications of an analysis of nuclear DNA sequence data. Proc. R. Soc. Lond. B. 269:2001;295-308
2. Fang Q.Q, Mitchell A, Regier J.C, Mitter C, Friedlander T.P, Poole R.W. Phylogenetic utility of the nuclear gene dopa decarboxylase in noctuoid moths (Insecta: Lepidoptera: Noctuoidea). Mol. Phylog. Evol. 15:2000;473-486
3. Friedmann, H., 1950. The birds of North and Middle America. Part XI. Smithsonian Institution Bull. No. 50, Washington
4. Griffiths C.S. Monophyly of the Falconiformes based on syringeal morphology. Auk. 111:1994;787-805
5. Griffiths C.S. Correlation of functional domains and rates of nucleotide substitution in cytochrome b. Mol. Phylog. Evol. 7:1997;353-365
6. Griffiths C.S. Phylogeny of the Falconidae inferred from molecular and morphological data. Auk. 116:1999;116-130
7. Groth J.G, Barrowclough G.F. Basal divergences in birds and the phylogenetic utility of the nuclear RAG-1 gene. Mol. Phylog. Evol. 12:1999;115-123
8. Hillis D.M. Approaches for assessing phylogenetic accuracy. Syst. Biol. 44:1995;3-16
9. Livezey B.C. A phylogenetic analysis of recent anseriform genera using morphological characters. Auk. 103:1986;737-743
10. Lockhart P.J, Steel M.A, Hendy M.D, Penny D. Recovering evolutionary trees under a more realistic model of sequence evolution. Mol. Biol. Evol. 11:1994;605-612
11. Mitchell A, Cho S, Regier J.C, Mitter C, Poole R.W, Matthews M. Phylogenetic utility of elongation factor-1α in Noctuoidea (Insecta: Lepidoptera): the limits of synonymous substitution. Mol. Biol. Evol. 14:1997;381-390
12. Naylor G, Kraus F. The relationship between s and m and the retention index. Syst. Biol. 44:1995;559-562
13. Olson S.L. The affinities of the falconid genus Spiziapteryx. Auk. 91:1976;633-635
14. Paton T.A, Baker A.J, Groth J.G, Barrowclough G.F. RAG-1 sequences resolve phylogenetic relationships within Charadriiform birds. Mol. Phylog. Evol. 29:2003;268-278
15. Peters J.L. Check-list of the Birds of the World. vol. 1:1931;Harvard University Press, Cambridge, Massachusetts
16. Posada D, Crandall K.A. MODELTEST: testing the model of DNA substitution. Bioinformatics. 14:1998;817-818
17. Roger A.J, Sandblom O, Doolittle W.F, Philippe H. An evaluation of elongation factor-1α as a phylogenetic marker for eukaryotes. Mol. Biol. Evol. 16:1999;218-233
18. Sharpe R.B. Catalogue of Birds. 1874;British Museum, London
19. Sokal R.R, Rohlf F.J. Biometry. third ed. 1995;Freeman, New York
20. Stimmer K, Von Haeseler A. Quartet puzzling: a quartet maximum-likelihood method for reconstructing tree topologies. Mol. Biol. Evol. 13:1996;964-969
21. Swann H.K. A Synopsis of the Accipitres. 1922;Wheldon and Wesley, London
22. Swofford D.L. PAUP*: Phylogenetic Analysis Using Parsimony (*and other methods, Version 4). 1999;Sinauer, Sunderland, MA
23. Swofford D.L, Olsen G.J, Waddell P.J, Hillis D.M. Phylogenetic inference. Hillis D.M, Moritz C, Mable B.K. Molecular Systematics. 1996;407-514 Sinauer, Sunderland, MA