-
1
-
-
0023518540
-
A strategy for the rapid multiple alignment of protein sequences: Confidence levels from tertiary structure comparisons
-
Barton, G.J. and Stemberg, M.J.E. (1987) A strategy for the rapid multiple alignment of protein sequences: confidence levels from tertiary structure comparisons. J. Mol. Biol., 198, 327-337.
-
(1987)
J. Mol. Biol.
, vol.198
, pp. 327-337
-
-
Barton, G.J.1
Stemberg, M.J.E.2
-
2
-
-
0642373240
-
A study of quality measures for protein threading models
-
Cristobal, S., Zemla, A., Fischer, D., Rychlewski, L. and Elofsson, A. (2001) A study of quality measures for protein threading models. BMC Bioinformatics, 2, 5.
-
(2001)
BMC Bioinformatics
, vol.2
, pp. 5
-
-
Cristobal, S.1
Zemla, A.2
Fischer, D.3
Rychlewski, L.4
Elofsson, A.5
-
3
-
-
0003234370
-
Multiple alignment for structural, functional, or phylogenetic analyses of homologous sequences
-
Higgins, D. and Taylor, W. (eds), Oxford University Press, Oxford
-
Duret, L. and Abdeddaim, S. (2000) Multiple alignment for structural, functional, or phylogenetic analyses of homologous sequences. Bioinformatics, Sequence, Structure and Databanks. Higgins, D. and Taylor, W. (eds), Oxford University Press, Oxford.
-
(2000)
Bioinformatics, Sequence, Structure and Databanks
-
-
Duret, L.1
Abdeddaim, S.2
-
4
-
-
0034855972
-
Evaluation of protein multiple alignments by SAM-T99 using the BAliBASE multiple alignment test set
-
Karplus, K. and Hu, B. (2001) Evaluation of protein multiple alignments by SAM-T99 using the BAliBASE multiple alignment test set. Bioinformatics, 17, 713-720.
-
(2001)
Bioinformatics
, vol.17
, pp. 713-720
-
-
Karplus, K.1
Hu, B.2
-
5
-
-
0034495586
-
ProSup: A refined tool for protein structure alignment
-
Lackner, P., Koppensteiner, W.A., Sippl, M.J. and Domingues, F.S. (2000) ProSup: a refined tool for protein structure alignment. Protein Eng., 13, 745-752.
-
(2000)
Protein Eng.
, vol.13
, pp. 745-752
-
-
Lackner, P.1
Koppensteiner, W.A.2
Sippl, M.J.3
Domingues, F.S.4
-
6
-
-
0031766401
-
HOMSTRAD: A database of protein structure alignments for homologous families
-
Mizuguchi, K., Deane, C.M., Blundell, T.L. and Overington, J.P. (1998) HOMSTRAD: a database of protein structure alignments for homologous families. Protein Sci., 7, 2469-2471.
-
(1998)
Protein Sci.
, vol.7
, pp. 2469-2471
-
-
Mizuguchi, K.1
Deane, C.M.2
Blundell, T.L.3
Overington, J.P.4
-
7
-
-
0036208872
-
Recent progress in multiple sequence alignments
-
Notredame, C. (2002) Recent progress in multiple sequence alignments. Pharmacogenomics, 3, 131-144.
-
(2002)
Pharmacogenomics
, vol.3
, pp. 131-144
-
-
Notredame, C.1
-
8
-
-
0029872694
-
SAGA: Sequence alignment by genetic algorithm
-
Notredame, C. and Higgins, D.G. (1996) SAGA: sequence alignment by genetic algorithm. Nucleic Acids Res., 24, 1515-1524.
-
(1996)
Nucleic Acids Res.
, vol.24
, pp. 1515-1524
-
-
Notredame, C.1
Higgins, D.G.2
-
9
-
-
0034623005
-
T-Coffee: A novel algorithm for multiple sequence alignment
-
Notredame, C., Higgins, D.G. and Heringa, J. (2000) T-Coffee: a novel algorithm for multiple sequence alignment. J. Mol. Biol., 302, 205-217.
-
(2000)
J. Mol. Biol.
, vol.302
, pp. 205-217
-
-
Notredame, C.1
Higgins, D.G.2
Heringa, J.3
-
10
-
-
0026511848
-
A data bank merging related protein structures and sequences
-
Pascarella, S. and Argos, P. (1992) A data bank merging related protein structures and sequences. Protein Eng., 5, 121-137.
-
(1992)
Protein Eng.
, vol.5
, pp. 121-137
-
-
Pascarella, S.1
Argos, P.2
-
11
-
-
0033670439
-
MaxSub: An automated measure for the assessment of protein structure prediction quality
-
Siew, N., Elofsson, A., Rychlewski, L. and Fischer, D. (2000) MaxSub: an automated measure for the assessment of protein structure prediction quality. Bioinformatics, 16, 776-785.
-
(2000)
Bioinformatics
, vol.16
, pp. 776-785
-
-
Siew, N.1
Elofsson, A.2
Rychlewski, L.3
Fischer, D.4
-
12
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J., Higgins, D. and Gibson, T. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res., 22, 4673-4690.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4690
-
-
Thompson, J.1
Higgins, D.2
Gibson, T.3
-
13
-
-
0032988850
-
BaliBase: A benchmark alignment database for the evaluation of multiple sequence alignment programs
-
Thompson, J., Plewniak, F. and Poch, O. (1999) BaliBase: a benchmark alignment database for the evaluation of multiple sequence alignment programs. Bioinformatics, 15(1), 87-88.
-
(1999)
Bioinformatics
, vol.15
, Issue.1
, pp. 87-88
-
-
Thompson, J.1
Plewniak, F.2
Poch, O.3
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