-
1
-
-
0038359432
-
High-resolution genotyping by amplicon melting analysis using LCGreen
-
Wittwer CT, Reed GH, Gundry CN, Vandersteen JG, Pryor RJ. High-resolution genotyping by amplicon melting analysis using LCGreen. Clin Chem 2003;49:853-60.
-
(2003)
Clin Chem
, vol.49
, pp. 853-860
-
-
Wittwer, C.T.1
Reed, G.H.2
Gundry, C.N.3
Vandersteen, J.G.4
Pryor, R.J.5
-
2
-
-
0031451539
-
Real-time fluorescence genotyping of factor V Leiden during rapid-cycle PCR
-
Lay MJ, Wittwer CT. Real-time fluorescence genotyping of factor V Leiden during rapid-cycle PCR. Clin Chem 1997;43:2262-7.
-
(1997)
Clin Chem
, vol.43
, pp. 2262-2267
-
-
Lay, M.J.1
Wittwer, C.T.2
-
3
-
-
0028834086
-
Oligonucleotides with fluorescent dyes at opposite ends provide a quenched probe system useful for detecting PCR product and nucleic acid hybridization
-
Livak KJ, Flood SJ, Marmaro J, Giusti W, Deetz K. Oligonucleotides with fluorescent dyes at opposite ends provide a quenched probe system useful for detecting PCR product and nucleic acid hybridization. PCR Methods Appl 1995;4:357-62.
-
(1995)
PCR Methods Appl
, vol.4
, pp. 357-362
-
-
Livak, K.J.1
Flood, S.J.2
Marmaro, J.3
Giusti, W.4
Deetz, K.5
-
4
-
-
0035283211
-
Fluorescein-labeled oligonucleotides for real-time pcr: Using the inherent quenching of deoxyguanosine nucleotides
-
Crockett AO, Wittwer CT. Fluorescein-labeled oligonucleotides for real-time pcr: using the inherent quenching of deoxyguanosine nucleotides. Anal Biochem 2001;290:89-97.
-
(2001)
Anal Biochem
, vol.290
, pp. 89-97
-
-
Crockett, A.O.1
Wittwer, C.T.2
-
5
-
-
0034090681
-
High-throughput SNP allele-frequency determination in pooled DNA samples by kinetic PCR
-
Germer S, Holland MJ, Higuchi R. High-throughput SNP allele-frequency determination in pooled DNA samples by kinetic PCR. Genome Res 2000;10:258-66.
-
(2000)
Genome Res
, vol.10
, pp. 258-266
-
-
Germer, S.1
Holland, M.J.2
Higuchi, R.3
-
6
-
-
0033046861
-
Single-tube genotyping without oligonucleotide probes
-
Germer S, Higuchi R. Single-tube genotyping without oligonucleotide probes. Genome Res 1999;9:72-8.
-
(1999)
Genome Res
, vol.9
, pp. 72-78
-
-
Germer, S.1
Higuchi, R.2
-
7
-
-
0037371570
-
Amplicon melting analysis with labeled primers: A closed-tube method for differentiating homozygotes and heterozygotes
-
Gundry CN, Vandersteen JG, Reed GH, Pryor RJ, Chen J, Wittwer CT. Amplicon melting analysis with labeled primers: a closed-tube method for differentiating homozygotes and heterozygotes. Clin Chem 2003;49:396-406.
-
(2003)
Clin Chem
, vol.49
, pp. 396-406
-
-
Gundry, C.N.1
Vandersteen, J.G.2
Reed, G.H.3
Pryor, R.J.4
Chen, J.5
Wittwer, C.T.6
-
8
-
-
0025965114
-
Rapid cycle DNA amplification: Time and temperature optimization
-
Wittwer CT, Garling DJ. Rapid cycle DNA amplification: time and temperature optimization. Biotechniques 1991;10:76-83.
-
(1991)
Biotechniques
, vol.10
, pp. 76-83
-
-
Wittwer, C.T.1
Garling, D.J.2
-
9
-
-
0029850530
-
A common genetic variation in the 3′-untranslated region of the prothrombin gene is associated with elevated plasma prothrombin levels and an increase in venous thrombosis
-
Poort SR, Rosendaal FR, Reitsma PH, Bertina RM. A common genetic variation in the 3′-untranslated region of the prothrombin gene is associated with elevated plasma prothrombin levels and an increase in venous thrombosis. Blood 1996;88:3698-703.
-
(1996)
Blood
, vol.88
, pp. 3698-3703
-
-
Poort, S.R.1
Rosendaal, F.R.2
Reitsma, P.H.3
Bertina, R.M.4
-
10
-
-
0031687887
-
A second genetic polymorphism in methylenetetrahydrofolate reductase (MTHFR) associated with decreased enzyme activity
-
Weisberg I, Tran P, Christensen B, Sibani S, Rozen R. A second genetic polymorphism in methylenetetrahydrofolate reductase (MTHFR) associated with decreased enzyme activity. Mol Genet Metab 1998;64:169-72.
-
(1998)
Mol Genet Metab
, vol.64
, pp. 169-172
-
-
Weisberg, I.1
Tran, P.2
Christensen, B.3
Sibani, S.4
Rozen, R.5
-
11
-
-
0031695438
-
Homogeneous multiplex genotyping of hemochromatosis mutations with fluorescent hybridization probes
-
Bernard PS, Ajioka RS, Kushner JP, Wittwer CT. Homogeneous multiplex genotyping of hemochromatosis mutations with fluorescent hybridization probes. Am J Pathol 1998;153:1055-61.
-
(1998)
Am J Pathol
, vol.153
, pp. 1055-1061
-
-
Bernard, P.S.1
Ajioka, R.S.2
Kushner, J.P.3
Wittwer, C.T.4
-
12
-
-
0034118889
-
Rapid β-globin genotyping by multiplexing probe melting temperature and color
-
Herrmann MG, Dobrowolski SF, Wittwer CT. Rapid β-globin genotyping by multiplexing probe melting temperature and color. Clin Chem 2000;46:425-8.
-
(2000)
Clin Chem
, vol.46
, pp. 425-428
-
-
Herrmann, M.G.1
Dobrowolski, S.F.2
Wittwer, C.T.3
-
13
-
-
0032761938
-
Optimization of an automated DNA purification protocol for neonatal screening
-
Heath EM, O'Brien DP, Banas R, Naylor EW, Dobrowolski S. Optimization of an automated DNA purification protocol for neonatal screening. Arch Pathol Lab Med 1999;123:1154-60.
-
(1999)
Arch Pathol Lab Med
, vol.123
, pp. 1154-1160
-
-
Heath, E.M.1
O'Brien, D.P.2
Banas, R.3
Naylor, E.W.4
Dobrowolski, S.5
-
14
-
-
0344417014
-
Use of a DNA toolbox for the characterization of mutation scanning methods. I: Construction of the toolbox and evaluation of heteroduplex analysis
-
Highsmith WE Jr, Jin Q, Nataraj AJ, O'Connor JM, Burland VD, Baubonis WR, et al. Use of a DNA toolbox for the characterization of mutation scanning methods. I: construction of the toolbox and evaluation of heteroduplex analysis. Electrophoresis 1999;20:1186-94.
-
(1999)
Electrophoresis
, vol.20
, pp. 1186-1194
-
-
Highsmith Jr., W.E.1
Jin, Q.2
Nataraj, A.J.3
O'Connor, J.M.4
Burland, V.D.5
Baubonis, W.R.6
-
15
-
-
0032562140
-
Nearest neighbor thermodynamic parameters for internal G.A mismatches in DNA
-
Allawi HT, SantaLucia J Jr. Nearest neighbor thermodynamic parameters for internal G.A mismatches in DNA. Biochemistry 1998;37:2170-9.
-
(1998)
Biochemistry
, vol.37
, pp. 2170-2179
-
-
Allawi, H.T.1
SantaLucia Jr., J.2
-
16
-
-
0032102940
-
Thermodynamics of internal C.T mismatches in DNA
-
Allawi HT, SantaLucia J Jr. Thermodynamics of internal C.T mismatches in DNA. Nucleic Acids Res 1998;26:2694-701.
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 2694-2701
-
-
Allawi, H.T.1
SantaLucia Jr., J.2
-
17
-
-
0032581024
-
Nearest-neighbor thermodynamics of internal A.C mismatches in DNA: Sequence dependence and pH effects
-
Allawi HT, SantaLucia J Jr. Nearest-neighbor thermodynamics of internal A.C mismatches in DNA: sequence dependence and pH effects. Biochemistry 1998;37:9435-44.
-
(1998)
Biochemistry
, vol.37
, pp. 9435-9444
-
-
Allawi, H.T.1
SantaLucia Jr., J.2
-
18
-
-
0030875847
-
Thermodynamics and NMR of internal G.T mismatches in DNA
-
Allawi HT, SantaLucia J Jr. Thermodynamics and NMR of internal G.T mismatches in DNA. Biochemistry 1997;36:10581-94.
-
(1997)
Biochemistry
, vol.36
, pp. 10581-10594
-
-
Allawi, H.T.1
SantaLucia Jr., J.2
-
19
-
-
0034194135
-
Thermodynamic parameters for DNA sequences with dangling ends
-
Bommarito S, Peyret N, SantaLucia J Jr. Thermodynamic parameters for DNA sequences with dangling ends. Nucleic Acids Res 2000;28:1929-34.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 1929-1934
-
-
Bommarito, S.1
Peyret, N.2
SantaLucia Jr., J.3
-
20
-
-
0033596964
-
Nearest-neighbor thermodynamics and NMR of DNA sequences with internal A.A, C.C, G.G, and T.T mismatches
-
Peyret N, Seneviratne PA, Allawi HT, SantaLucia J Jr. Nearest-neighbor thermodynamics and NMR of DNA sequences with internal A.A, C.C, G.G, and T.T mismatches. Biochemistry 1999;38:3468-77.
-
(1999)
Biochemistry
, vol.38
, pp. 3468-3477
-
-
Peyret, N.1
Seneviratne, P.A.2
Allawi, H.T.3
SantaLucia Jr., J.4
-
21
-
-
0029968822
-
Improved nearest-neighbor parameters for predicting DNA duplex stability
-
SantaLucia J Jr, Allawi HT, Seneviratne PA. Improved nearest-neighbor parameters for predicting DNA duplex stability. Biochemistry 1996;35:3555-62.
-
(1996)
Biochemistry
, vol.35
, pp. 3555-3562
-
-
SantaLucia Jr., J.1
Allawi, H.T.2
Seneviratne, P.A.3
-
22
-
-
0032539693
-
A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics
-
SantaLucia J Jr. A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics. Proc Natl Acad Sci U S A 1998;95:1460-5.
-
(1998)
Proc Natl Acad Sci U S A
, vol.95
, pp. 1460-1465
-
-
SantaLucia Jr., J.1
-
23
-
-
0034771194
-
2+, deoxynucleotide triphosphate, and dimethyl sulfoxide concentrations with comparison to alternative empirical formulas
-
2+, deoxynucleotide triphosphate, and dimethyl sulfoxide concentrations with comparison to alternative empirical formulas. Clin Chem 2001;47:1956-61.
-
(2001)
Clin Chem
, vol.47
, pp. 1956-1961
-
-
Von Ahsen, N.1
Wittwer, C.T.2
Schutz, E.3
-
24
-
-
0036852246
-
Neighboring-nucleotide effects on single nucleotide polymorphisms: A study of 2.6 million polymorphisms across the human genome
-
Zhao Z, Boerwinkle E. Neighboring-nucleotide effects on single nucleotide polymorphisms: a study of 2.6 million polymorphisms across the human genome. Genome Res 2002;12:1679-86.
-
(2002)
Genome Res
, vol.12
, pp. 1679-1686
-
-
Zhao, Z.1
Boerwinkle, E.2
-
25
-
-
0032758666
-
Application of a thermodynamic nearest-neighbor model to estimate nucleic acid stability and optimize probe design: Prediction of melting points of multiple mutations of apolipoprotein B-3500 and factor V with a hybridization probe genotyping assay on the LightCycler
-
von Ahsen N, Oellerich M, Armstrong VW, Schutz E. Application of a thermodynamic nearest-neighbor model to estimate nucleic acid stability and optimize probe design: prediction of melting points of multiple mutations of apolipoprotein B-3500 and factor V with a hybridization probe genotyping assay on the LightCycler. Clin Chem 1999;45:2094-101.
-
(1999)
Clin Chem
, vol.45
, pp. 2094-2101
-
-
Von Ahsen, N.1
Oellerich, M.2
Armstrong, V.W.3
Schutz, E.4
-
26
-
-
0038313211
-
Detection of single nucleotide polymorphisms
-
Kwok PY, Chen X. Detection of single nucleotide polymorphisms. Curr Issues Mol Biol 2003;5:43-60.
-
(2003)
Curr Issues Mol Biol
, vol.5
, pp. 43-60
-
-
Kwok, P.Y.1
Chen, X.2
-
27
-
-
1842842750
-
Pyrosequencing for SNP genotyping
-
Ronaghi M. Pyrosequencing for SNP genotyping. Methods Mol Biol 2003;212:189-95.
-
(2003)
Methods Mol Biol
, vol.212
, pp. 189-195
-
-
Ronaghi, M.1
-
28
-
-
0037176210
-
Genotyping single-nucleotide polymorphisms by matrix-assisted laser-desorption/ionization time-of-flight mass spectrometry
-
Sauer S, Gut IG. Genotyping single-nucleotide polymorphisms by matrix-assisted laser-desorption/ionization time-of-flight mass spectrometry. J Chromatogr B Analyt Technol Biomed Life Sci 2002;782:73-87.
-
(2002)
J Chromatogr B Analyt Technol Biomed Life Sci
, vol.782
, pp. 73-87
-
-
Sauer, S.1
Gut, I.G.2
-
29
-
-
0027291689
-
Allelic discrimination by nick-translation PCR with fluorogenic probes
-
Lee LG, Connell CR, Bloch W. Allelic discrimination by nick-translation PCR with fluorogenic probes. Nucleic Acids Res 1993;21:3761-6.
-
(1993)
Nucleic Acids Res
, vol.21
, pp. 3761-3766
-
-
Lee, L.G.1
Connell, C.R.2
Bloch, W.3
-
30
-
-
0035713577
-
Using molecular beacons to detect single-nucleotide polymorphisms with real-time PCR
-
Mhlanga MM, Malmberg L. Using molecular beacons to detect single-nucleotide polymorphisms with real-time PCR. Methods 2001;25:463-71.
-
(2001)
Methods
, vol.25
, pp. 463-471
-
-
Mhlanga, M.M.1
Malmberg, L.2
-
31
-
-
0038515317
-
Miniaturized SNP detection: Quasi-solid-phase RFLP analysis
-
Ronai Z, Sasvari-Szekely M, Guttman A. Miniaturized SNP detection: quasi-solid-phase RFLP analysis. Biotechniques 2003;34:1172-3.
-
(2003)
Biotechniques
, vol.34
, pp. 1172-1173
-
-
Ronai, Z.1
Sasvari-Szekely, M.2
Guttman, A.3
-
33
-
-
0013351171
-
Real-time PCR
-
Persing D, Tenover F, Relman D, White T, Tang Y, Versalovic J, Unger B, eds. Washington: ASM Press
-
Wittwer C, Kusukawa N. Real-time PCR. In: Persing D, Tenover F, Relman D, White T, Tang Y, Versalovic J, Unger B, eds. Diagnostic molecular microbiology; principles and applications. Washington: ASM Press, 2003:71-84.
-
(2003)
Diagnostic Molecular Microbiology; Principles and Applications
, pp. 71-84
-
-
Wittwer, C.1
Kusukawa, N.2
-
38
-
-
0027234131
-
Dependence of polymerase chain reaction product inactivation protocols on amplicon length and sequence composition
-
Espy MJ, Smith TF, Persing DH. Dependence of polymerase chain reaction product inactivation protocols on amplicon length and sequence composition. J Clin Microbiol 1993;31:2361-5.
-
(1993)
J Clin Microbiol
, vol.31
, pp. 2361-2365
-
-
Espy, M.J.1
Smith, T.F.2
Persing, D.H.3
-
39
-
-
0035895505
-
The sequence of the human genome
-
Venter JC, Adams MD, Myers EW, Li PW, Mural RJ, Sutton GG, et al. The sequence of the human genome. Science 2001;291:1304-51.
-
(2001)
Science
, vol.291
, pp. 1304-1351
-
-
Venter, J.C.1
Adams, M.D.2
Myers, E.W.3
Li, P.W.4
Mural, R.J.5
Sutton, G.G.6
-
40
-
-
0032437725
-
Detection and identification of base alterations within the region of factor V Leiden by fluorescent melting curves
-
Lyon E, Millson A, Phan T, Wittwer C. Detection and identification of base alterations within the region of factor V Leiden by fluorescent melting curves. Mol Diagn 1998;3:203-9.
-
(1998)
Mol Diagn
, vol.3
, pp. 203-209
-
-
Lyon, E.1
Millson, A.2
Phan, T.3
Wittwer, C.4
-
41
-
-
0034537609
-
High-throughput SNP detection by using DNA pooling and denaturing high performance liquid chromatography (DHPLC)
-
Wolford JK, Blunt D, Ballecer C, Prochazka M. High-throughput SNP detection by using DNA pooling and denaturing high performance liquid chromatography (DHPLC). Hum Genet 2000;107:483-7.
-
(2000)
Hum Genet
, vol.107
, pp. 483-487
-
-
Wolford, J.K.1
Blunt, D.2
Ballecer, C.3
Prochazka, M.4
-
42
-
-
0036078960
-
Integrated platform for detection of DNA sequence variants using capillary array electrophoresis
-
Li Q, Liu Z, Monroe H, Culiat CT. Integrated platform for detection of DNA sequence variants using capillary array electrophoresis. Electrophoresis 2002;23:1499-511.
-
(2002)
Electrophoresis
, vol.23
, pp. 1499-1511
-
-
Li, Q.1
Liu, Z.2
Monroe, H.3
Culiat, C.T.4
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