Proteomic analysis of carbonylated proteins in two-dimensional gel electrophoresis using avidin-flourescein affinity staining

Electrophoresis

Volumn 25, Issue 9, 2004, Pages 1334-1341

  Yoo, Byoung Sam ^a   Regnier, Fred E ^a  

^a PURDUE UNIVERSITY   (United States)

Author keywords

Avidin fluorescein isothiocyanate; Biotin hydrazide; Matrix assisted laser desorption ionization time of flight mass spectrometry; Metal catalyzed oxidation; Peptide mass fingerprinting; Protein carbonyls; Two dimensional gel electrophoresis

Indexed keywords

CATALYSIS; CELL CULTURE; COENZYMES; DESORPTION; ELECTROPHORESIS; GLYCOPROTEINS; HYDROGEN PEROXIDE; LIPIDS; MAMMALS; MASS SPECTROMETRY; OXIDATIVE STRESS; PEPTIDES; SODIUM DODECYL SULFATE; SULFUR COMPOUNDS; YEAST;

AVIDIN-FLUORESCEIN ISOTHIOCYANATE; BIOTIN-HYDRAZIDE; BIOTINYLATIONS; CARBONYL GROUPS; FLUORESCEIN ISOTHIOCYANATE; MATRIX-ASSISTED LASER DESORPTION/IONIZATION-TIME-OF-FLIGHT MASS SPECTROMETRY; METAL-CATALYZED OXIDATIONS; PEPTIDE MASS FINGERPRINTING; PROTEIN CARBONYLS; TWO-DIMENSIONAL GEL ELECTROPHORESIS;

OXIDATION;

ACONITATE HYDRATASE; AVIDIN; BIOTIN; BOVINE SERUM ALBUMIN; BUFFER; CARBONYL DERIVATIVE; ENOLASE; FLUORESCEIN; FLUORESCEIN ISOTHIOCYANATE; FRUCTOSE BISPHOSPHATE ALDOLASE; GLYCERALDEHYDE 3 PHOSPHATE DEHYDROGENASE; HEAT SHOCK PROTEIN; HYDRAZIDE; HYDROGEN PEROXIDE; ISOENZYME; PEPTIDE; PHOSPHOGLYCERATE KINASE; POLYPEPTIDE; PROTEIN; PROTEOME; PYRUVATE DECARBOXYLASE; PYRUVATE KINASE; RIBONUCLEASE A; SCHIFF BASE;

AMINO ACID SEQUENCE; ARTICLE; BINDING AFFINITY; BIOTINYLATION; CARBONYLATION; CELL CULTURE; CONTROLLED STUDY; EXTRACTION; IN VIVO STUDY; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; NONHUMAN; OXIDATION; OXIDATIVE STRESS; POLYACRYLAMIDE GEL ELECTROPHORESIS; PROTEIN ANALYSIS; PROTEIN MODIFICATION; PROTEOMICS; STAINING; TECHNIQUE; TEMPERATURE; TWO DIMENSIONAL GEL ELECTROPHORESIS; YEAST CELL;

EID: 3042523891     PISSN: 01730835     EISSN: None     Source Type: Journal    
DOI: 10.1002/elps.200405890     Document Type: Article

References (41)

1. Berlett, B. S., Stadtman, E. R., J. Biol. Chem. 1997, 272, 20313-20316.
2. Stadtman, E. R., Berlett, B. S., Chem. Res. Toxicol. 1997, 10, 485-494.
3. Stadtman, E. R., Science 1992, 257, 1220-1224.
4. Shringarpure, R., Davies, K. J. A., Free Radical Bio. Med. 2002, 32, 1084-1089.
5. Davies, K. J. A., J. Biol. Chem. 1987, 262, 9895-9901.
6. Davies, K. J. A., Delsignore, M. E., Lin, S. W., J. Biol. Chem. 1987, 262, 9902-9907.
7. Davies, K. J. A., Delsignore, M. E., J. Biol. Chem. 1987, 262, 9908-9913.
8. Davies, K. J. A., Lin, S. W., Pacifici, R. E., J. Biol. Chem. 1987, 262, 9914-9920.
9. Amici, A., Levine, R. L., Tsai, L., Stadtman, E. R., J. Biol. Chem. 1989, 264, 3341-3346.
10. Requena, J. R., Stadtman, E. R., Biochem. Biophys. Res. Commun. 1999, 264, 207-211.
11. Uchida, K., Stadtman, E. R., J. Biol. Chem. 1993, 268, 6388-6393.
12. Miyata, T., Inagi, R., Asahi, K., Yamada, Y., Horie, K., Sakai, H., Uchida, K., Kurokawa, K., FEBS Lett. 1998, 437, 24-28.
13. Kristal, B. S., Yu, B. P., J. Gerontol. 1992, 47, B107-B114.
14. Morgan, P. E., Dean, R. T., Davies, M. J., Arch. Biochem. Biophys. 2002, 403, 259-269.
15. Oliver, C. N., Ahn, B. W., Moerman, E. J., Goldstein, S., Stadtman, E. R., J. Biol. Chem. 1987, 262, 5488-5491.
16. Gladstone, I. M., Levine, R. L., Pediatrics 1994, 93, 764-768.
17. Bowling, A. C., Schultz, J. B., Brown, R. H., Jr., Beal, M. F., J. Neurochem. 1993, 61, 2322-2325.
18. Murphy, M. E., Kehrer, J. P., Biochem. J. 1989, 260, 359-364.
19. Simic, M. G., Taylor, K. S., Ward, J. F., von Sontag, V., Oxygen Radicals in Biology and Medicine, Plenum Press, New York 1988, pp. 347-353.
20. Chapman, M. L., Rubin, B. R., Gracy, R. W., J. Rheumatol. 1989, 16, 15-18.
21. Smith, C. D., Carney, J. M., Starke-Reed, P. E., Oliver, C. N., Stadtman, E. R., Floyd, R. A., Proc. Natl. Acad. Sci. USA 1991, 88, 10540-10543.
22. Levine, R. L., Garland, D., Oliver, C. N., Amici, A., Climent, I., Lenz, A.-G. Ahn, B.-W. Shaltiel, S., Stadtman, E. R., Methods Enzymol. 1990, 186, 464-478.
23. Nakamura, A., Goto, S., J. Biochem. 1996, 119, 768-774.
24. Choi, J., Malakowsky, C. A., Talent, J. M., Conrad, C. C., Gracy, R. W., Biochem. Biophys. Res. Commun. 2002, 293, 1566-1570.
25. Korolainen, M. A., Goldsteins, G., Alafuzoff, I., Koistinaho, J., Pirttila, T., Electrophoresis 2002, 23, 3428-3433.
26. Conrad, C. C., Choi, J. G., Malakowsky, C. A., Talent, J. M., Dai, R., Marshall, P., Gracy, R. W., Proteomics 2001, 1, 829-834.
27. Reinheckel, T., Korn, S., Mohring, S., Augustin, W., Halangk, W., Schild, L., Arch. Biochem. Biophys. 2000, 376, 59-65.
28. Bautista, J., Mateos-Nevado, M., Biosci. Biotechnol. Biochem. 1998, 62, 419-423.
29. Nakamura, M., Tsumoto, K., Ishimura, K., Kumagai, I., Anal. Biochem. 2002, 304, 231-235.
30. Requena, J. R., Chao, C.-C., Levine, R. L., Stadtman, E. R., PNAS 2001, 98, 69-74.
31. Michaelis, S., Herskowitz, I., Mol. Cell. Biol. 1988, 8, 1309-1318.
32. Laemmli, U. K., Nature 1970, 227, 680-685.
33. Hochstrasser, D. F., Harrington, M. G., Hochstrasser, A. C., Miller, M. J., Merril, C. R., Anal. Biochem. 1988, 173, 424-435.
34. Hochstrasser, D. F., Augsburger, V., Funk, M., Appel, R., Pelegrini, C., Müller, A. F., Electrophoresis 1986, 7, 505-511.
35. Shevchenko, A., Wilm, M., Vorm, O., Mann, M., Anal. Chem. 1996, 68, 850-858.
36. Gharahdaghi, F., Weinberg, C. R., Meagher, D. A., Imai, B. S., Mische, S. M., Electrophoresis 1999, 20, 601-605.
37. Shacter, E., Williams, J. A., Lim, M., Levine, R. L., Free Radical Biol. Med. 1994, 17, 429-437.
38. Grune, T., Reinheckel, T., Joshi, M., Davies, K. J. A., J. Biol. Chem. 1995, 270, 2344-2351.
39. Grune, T., Reinheckel, T., Davies, K. J. A., J. Biol. Chem. 1996, 271, 15504-15509.
40. Grune, T., Shringarpure, R., Sitte, N., Davies, K., J. Gerontol. 2001, 56, B459-B467.
41. Cabiscol, E., Piulats, E., Echave, P., Herrero, E., Ros, J., J. Biol. Chem. 2000, 275, 27393-27398.