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Volumn 38, Issue 2, 2006, Pages 439-448

The mammalian αD-globin gene lineage and a new model for the molecular evolution of α-globin gene clusters at the stem of the mammalian radiation

Author keywords

Alpha globin; AlphaD globin; Globin gene evolution; Human mu chain globin; Marsupial; PAML

Indexed keywords

AMNIOTA; AVES; CANIS FAMILIARIS; DIDELPHIMORPHIA; EUTHERIA; MAMMALIA; METATHERIA; SMINTHOPSIS MACROURA; SQUAMATA; SUS SCROFA; TESTUDINES;

EID: 30344458522     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2005.05.014     Document Type: Article
Times cited : (21)

References (41)
  • 1
    • 0024066416 scopus 로고
    • Primary structure of the hemoglobins from Sphenodon (Sphenodon punctatus, Tuatara, Rhyncocephalia)
    • A. Abbasi, R.M.G. Wells, T. Brittain, and G. Braunitzer Primary structure of the hemoglobins from Sphenodon (Sphenodon punctatus, Tuatara, Rhyncocephalia) Biol. Chem. Hoppe-Seyler 369 1988 755 764
    • (1988) Biol. Chem. Hoppe-Seyler , vol.369 , pp. 755-764
    • Abbasi, A.1    Wells, R.M.G.2    Brittain, T.3    Braunitzer, G.4
  • 2
    • 0023544897 scopus 로고
    • Functional properties of primitive and definitive red cells from chick embryo: Oxygen-binding characteristics, pH and membrane potential, and response to hypoxia
    • R. Baumann, J. Fischer, and M. Engelke Functional properties of primitive and definitive red cells from chick embryo: oxygen-binding characteristics, pH and membrane potential, and response to hypoxia J. Exp. Zool. Suppl. 1 1987 S227 S238
    • (1987) J. Exp. Zool. , Issue.1 SUPPL.
    • Baumann, R.1    Fischer, J.2    Engelke, M.3
  • 3
    • 0016227979 scopus 로고
    • Structural studies on chick embryonic hemoglobins
    • J.L. Brown, and V.M. Ingram Structural studies on chick embryonic hemoglobins J. Biol. Chem. 249 1974 3960 3972
    • (1974) J. Biol. Chem. , vol.249 , pp. 3960-3972
    • Brown, J.L.1    Ingram, V.M.2
  • 4
    • 0015935909 scopus 로고
    • The erythroid cells and haemoglobins of the chick embryo
    • G.-A. Bruns, and V.M. Ingram The erythroid cells and haemoglobins of the chick embryo Phil. Trans. R. Soc. London B 266 1973 225 305
    • (1973) Phil. Trans. R. Soc. London B , vol.266 , pp. 225-305
    • Bruns, G.-A.1    Ingram, V.M.2
  • 5
    • 21244443861 scopus 로고    scopus 로고
    • The α-globin gene family of an Australian marsupial Macropus eugenii: Long evolutionary history of the θ-globin gene and its functional status in mammals
    • (in press).
    • Cooper, S.J.B., Wheeler, D., Hope, R.M., Dolman, G., Saint, K.M., Gooley, A.A., Holland, R.A.B., 2005. The α-globin gene family of an Australian marsupial Macropus eugenii: long evolutionary history of the θ-globin gene and its functional status in mammals. J. Mol. Evol. (in press).
    • (2005) J. Mol. Evol.
    • Cooper, S.J.B.1    Wheeler, D.2    Hope, R.M.3    Dolman, G.4    Saint, K.M.5    Gooley, A.A.6    Holland, R.A.B.7
  • 9
    • 0035707777 scopus 로고    scopus 로고
    • Amino acid sequence of Kalinowaski's Tinamou (Nothoprocta kalinowskii) hemoglobin and the rate of evolution of bird alpha(D)-globin
    • Y. Eguchi, and T. Eguchi Amino acid sequence of Kalinowaski's Tinamou (Nothoprocta kalinowskii) hemoglobin and the rate of evolution of bird alpha(D)-globin J. Protein Chem. 20 2001 543 549
    • (2001) J. Protein Chem. , vol.20 , pp. 543-549
    • Eguchi, Y.1    Eguchi, T.2
  • 10
    • 0019153996 scopus 로고
    • Analysis of the closely linked adult chicken α-globin genes in recombinant DNAs
    • J.D. Engel, and J.B. Dodgson Analysis of the closely linked adult chicken α-globin genes in recombinant DNAs Proc. Natl. Acad. Sci. USA 77 1980 2596 2600
    • (1980) Proc. Natl. Acad. Sci. USA , vol.77 , pp. 2596-2600
    • Engel, J.D.1    Dodgson, J.B.2
  • 11
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • J. Felsenstein Confidence limits on phylogenies: an approach using the bootstrap Evolution 39 1985 783 791
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 12
    • 0024278155 scopus 로고
    • Structure and evolution of the horse zeta globin locus
    • J. Flint, A.M. Taylor, and J.B. Clegg Structure and evolution of the horse zeta globin locus J. Mol. Biol. 199 1988 427 437
    • (1988) J. Mol. Biol. , vol.199 , pp. 427-437
    • Flint, J.1    Taylor, A.M.2    Clegg, J.B.3
  • 13
    • 0035864919 scopus 로고    scopus 로고
    • (11 co-authors), 2001. Comparative genome analysis delimits a chromosomal domain and identifies key regulatory elements in the alpha globin cluster
    • J. Flint, C. Tufarelli, and J. Peden (11 co-authors), 2001. Comparative genome analysis delimits a chromosomal domain and identifies key regulatory elements in the alpha globin cluster Hum. Mol. Genet. 10 2001 371 382
    • (2001) Hum. Mol. Genet. , vol.10 , pp. 371-382
    • Flint, J.1    Tufarelli, C.2    Peden, J.3
  • 14
    • 0029844788 scopus 로고    scopus 로고
    • The amino acid sequences of two α chains of hemoglobins from Komodo dragon Mu-anus komodoensis and phylogenetic relationships of Amniotes
    • K. Fushitani, K. Higashiyama, E.N. Moriyama, K. Imai, and K. Hosokawa The amino acid sequences of two α chains of hemoglobins from Komodo dragon Mu-anus komodoensis and phylogenetic relationships of Amniotes Mol. Biol. Evol. 13 1996 1039 1043
    • (1996) Mol. Biol. Evol. , vol.13 , pp. 1039-1043
    • Fushitani, K.1    Higashiyama, K.2    Moriyama, E.N.3    Imai, K.4    Hosokawa, K.5
  • 15
    • 0015159749 scopus 로고
    • Developmental changes of erythropoiesis in cultured chick blastoderms
    • H.K. Hagopian, and V.M. Ingram Developmental changes of erythropoiesis in cultured chick blastoderms J. Cell Biol. 51 1971 440 451
    • (1971) J. Cell Biol. , vol.51 , pp. 440-451
    • Hagopian, H.K.1    Ingram, V.M.2
  • 17
    • 0032052216 scopus 로고    scopus 로고
    • Hemoglobins from bacteria to man: Evolution of different patterns of gene expression
    • R.C. Hardison Hemoglobins from bacteria to man: evolution of different patterns of gene expression J. Exp. Biol. 201 1998 1099 1117
    • (1998) J. Exp. Biol. , vol.201 , pp. 1099-1117
    • Hardison, R.C.1
  • 19
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogeny
    • J.P. Huelsenbeck, and F. Ronquist MRBAYES: Bayesian inference of phylogeny Bioinformatics 17 2001 754 755
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 20
  • 21
    • 0018903047 scopus 로고
    • The chromosomal arrangement of human α-like globin genes: Sequence homology and α-globin gene deletions
    • J. Lauer, C.-K.J. Shen, and T. Maniatis The chromosomal arrangement of human α-like globin genes: sequence homology and α-globin gene deletions Cell 20 1980 119 130
    • (1980) Cell , vol.20 , pp. 119-130
    • Lauer, J.1    Shen, C.-K.J.2    Maniatis, T.3
  • 22
    • 0024415916 scopus 로고
    • Transcriptional and translational analysis of the human θ globin gene
    • S. Leung, E. Whitelaw, and N.J. Proudfoot Transcriptional and translational analysis of the human θ globin gene Nucleic Acids Res. 17 1989 8283 8300
    • (1989) Nucleic Acids Res. , vol.17 , pp. 8283-8300
    • Leung, S.1    Whitelaw, E.2    Proudfoot, N.J.3
  • 23
    • 0024961823 scopus 로고
    • The amino acid sequences of the α and β chains of hemoglobin from the snake, Liophis miliaris
    • M.S.A. Matsuura, K. Fushitani, and A.F. Riggs The amino acid sequences of the α and β chains of hemoglobin from the snake, Liophis miliaris J. Biol. Chem. 264 1989 5515 5521
    • (1989) J. Biol. Chem. , vol.264 , pp. 5515-5521
    • Matsuura, M.S.A.1    Fushitani, K.2    Riggs, A.F.3
  • 24
    • 0022486771 scopus 로고
    • Sequence organization and genomic complexity of primate θ1 globin gene, a novel α-globin-like gene
    • J. Marks, J.-P. Shaw, and C.-K.J. Shen Sequence organization and genomic complexity of primate θ1 globin gene, a novel α-globin-like gene Nature 321 1986 785 788
    • (1986) Nature , vol.321 , pp. 785-788
    • Marks, J.1    Shaw, J.-P.2    Shen, C.-K.J.3
  • 26
    • 0020711067 scopus 로고
    • Die Primärstruktur der α- Und β-Ketten der Hauptokomponenten der Hämoglobine des Straußes (Struthio camelus) und des Nandus (Rhea americana) (Struthioformes). Aspekte zur Atmungsphysiologie und Systematik
    • W. Oberthür, G. Braunitzer, R. Baumann, and P.G. Wright Die Primärstruktur der α- und β-Ketten der Hauptokomponenten der Hämoglobine des Straußes (Struthio camelus) und des Nandus (Rhea americana) (Struthioformes). Aspekte zur Atmungsphysiologie und Systematik Hoppe-Seyler's Z. Physiol. Chem. 364 1983 119 134
    • (1983) Hoppe-Seyler's Z. Physiol. Chem. , vol.364 , pp. 119-134
    • Oberthür, W.1    Braunitzer, G.2    Baumann, R.3    Wright, P.G.4
  • 27
    • 0018218933 scopus 로고
    • The duplicated human α globin genes lie close together in cellular DNA
    • S.H. Orkin The duplicated human α globin genes lie close together in cellular DNA Proc. Natl. Acad. Sci. USA 75 1978 5950 5954
    • (1978) Proc. Natl. Acad. Sci. USA , vol.75 , pp. 5950-5954
    • Orkin, S.H.1
  • 28
    • 0018973444 scopus 로고
    • The structure of a human α-globin pseudogene and its relationship to α-globin gene duplication
    • N.J. Proudfoot, and T. Maniatis The structure of a human α-globin pseudogene and its relationship to α-globin gene duplication Cell 21 1980 537 544
    • (1980) Cell , vol.21 , pp. 537-544
    • Proudfoot, N.J.1    Maniatis, T.2
  • 29
    • 0020363734 scopus 로고
    • The structure of the human zeta-globin gene and a closely linked, nearly identical pseudogene
    • N.J. Proudfoot, A. Gil, and T. Maniatis The structure of the human zeta-globin gene and a closely linked, nearly identical pseudogene Cell 31 1982 553 563
    • (1982) Cell , vol.31 , pp. 553-563
    • Proudfoot, N.J.1    Gil, A.2    Maniatis, T.3
  • 31
    • 0023954146 scopus 로고
    • Hemoglobins of reptiles. the primary structure of the major and minor hemoglobin component of adult Western Painted Turtle (Chrysemys picta bellii)
    • K.P. Rücknagel, and G. Braunitzer Hemoglobins of reptiles. The primary structure of the major and minor hemoglobin component of adult Western Painted Turtle (Chrysemys picta bellii) Biol. Chem. Hoppe-Seyler 369 1988 123 131
    • (1988) Biol. Chem. Hoppe-Seyler , vol.369 , pp. 123-131
    • Rücknagel, K.P.1    Braunitzer, G.2
  • 32
    • 0023253564 scopus 로고
    • Evidence that the recently discovered theta1-globin gene is functional in higher primates
    • J.P. Shaw, J. Marks, and C.-K.J. Shen Evidence that the recently discovered theta1-globin gene is functional in higher primates Nature 326 1987 717 720
    • (1987) Nature , vol.326 , pp. 717-720
    • Shaw, J.P.1    Marks, J.2    Shen, C.-K.J.3
  • 33
    • 0036341905 scopus 로고    scopus 로고
    • The primary structure of hemoglobin D from the Aldabra giant tortoise, Geochelone gigantea
    • F. Shishikura The primary structure of hemoglobin D from the Aldabra giant tortoise, Geochelone gigantea Zool. Sci. 19 2002 197 206
    • (2002) Zool. Sci. , vol.19 , pp. 197-206
    • Shishikura, F.1
  • 35
    • 0032964297 scopus 로고    scopus 로고
    • Blast 2 sequences-a new tool for comparing protein and nucleotide sequences
    • T.A. Tatusova, and T.L. Madden Blast 2 sequences-a new tool for comparing protein and nucleotide sequences FEMS Microbiol. Lett. 174 1999 247 250
    • (1999) FEMS Microbiol. Lett. , vol.174 , pp. 247-250
    • Tatusova, T.A.1    Madden, T.L.2
  • 36
    • 0031574072 scopus 로고    scopus 로고
    • The ClustalX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • J.D. Thompson, T.J. Gibson, F. Plewniak, F. Jeanmougin, and D.G. Higgins The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools Nucleic Acids Res. 25 1997 4876 4882
    • (1997) Nucleic Acids Res. , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 38
    • 2942637321 scopus 로고    scopus 로고
    • Linkage of the β-like ω-globin gene to α-like globin genes in an Australian marsupial supports the chromosome duplication model for separation of globin gene clusters
    • D. Wheeler, R.M. Hope, S.J.B. Cooper, A.A. Gooley, and R.A.B. Holland Linkage of the β-like ω-globin gene to α-like globin genes in an Australian marsupial supports the chromosome duplication model for separation of globin gene clusters J. Mol. Evol. 58 2004 642 652
    • (2004) J. Mol. Evol. , vol.58 , pp. 642-652
    • Wheeler, D.1    Hope, R.M.2    Cooper, S.J.B.3    Gooley, A.A.4    Holland, R.A.B.5
  • 39
    • 0030451420 scopus 로고    scopus 로고
    • Among-site rate variation and its impact on phylogenetic analyses
    • Z. Yang Among-site rate variation and its impact on phylogenetic analyses Trends Ecol. Evol. 11 1996 367 372
    • (1996) Trends Ecol. Evol. , vol.11 , pp. 367-372
    • Yang, Z.1
  • 41
    • 0031897964 scopus 로고    scopus 로고
    • Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution
    • Z. Yang Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution Mol. Biol. Evol. 15 1998 568 573
    • (1998) Mol. Biol. Evol. , vol.15 , pp. 568-573
    • Yang, Z.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.