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Volumn 70, Issue 6, 2004, Pages 3609-3617

Unusual microbial xylanases from insect guts

Author keywords

[No Author keywords available]

Indexed keywords

DNA; GENES; INSECT CONTROL; MICROORGANISMS; POLYMERS; SUBSTRATES;

EID: 2942533967     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.70.6.3609-3617.2004     Document Type: Article
Times cited : (153)

References (44)
  • 2
    • 0035132293 scopus 로고    scopus 로고
    • Cloning and heterologous expression of xylanase from Pichia stipitis in Escherichia coli
    • Basaran, P., Y. D. Hang, N. Basaran, and R. W. Worobo. 2001. Cloning and heterologous expression of xylanase from Pichia stipitis in Escherichia coli. J. Appl. Microbiol. 90:248-255.
    • (2001) J. Appl. Microbiol. , vol.90 , pp. 248-255
    • Basaran, P.1    Hang, Y.D.2    Basaran, N.3    Worobo, R.W.4
  • 3
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • Bradford, M. M. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72:248-254.
    • (1976) Anal. Biochem. , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 4
    • 0034044522 scopus 로고    scopus 로고
    • Microecology of the termite gut: Structure and function on a microscale
    • Brune, A., and M. Friedrich. 2000. Microecology of the termite gut: structure and function on a microscale. Curr. Opin. Microbiol. 3:263-269.
    • (2000) Curr. Opin. Microbiol. , vol.3 , pp. 263-269
    • Brune, A.1    Friedrich, M.2
  • 5
    • 0038663016 scopus 로고    scopus 로고
    • Promicromonospora pachnodae sp. nov., a member of the (hemi)cellulolytic hindgut flora of larvae of the scarab beetle Pachnoda marginata
    • Cazemier, A. E., J. C. Verdoes, F. A. Reubsaet, J. H. Hackstein, C. van der Drift, and H. J. Op den Camp. 2003. Promicromonospora pachnodae sp. nov., a member of the (hemi)cellulolytic hindgut flora of larvae of the scarab beetle Pachnoda marginata. Antonie Leeuwenhoek 83:135-148.
    • (2003) Antonie Leeuwenhoek , vol.83 , pp. 135-148
    • Cazemier, A.E.1    Verdoes, J.C.2    Reubsaet, F.A.3    Hackstein, J.H.4    Van Der Drift, C.5    Op Den Camp, H.J.6
  • 6
    • 0001973467 scopus 로고    scopus 로고
    • Carbohydrate-active enzymes: An integrated database approach
    • H. J. Gilbert, G. Davies, B. Henrissat, and B. Svensson (ed.), The Royal Society of Chemistry, Cambridge, United Kingdom
    • Coutinho, P. M., and B. Henrissat. 1999. Carbohydrate-active enzymes: an integrated database approach, p. 3-12. In H. J. Gilbert, G. Davies, B. Henrissat, and B. Svensson (ed.), Recent advances in carbohydrate bioengineering. The Royal Society of Chemistry, Cambridge, United Kingdom.
    • (1999) Recent Advances in Carbohydrate Bioengineering , pp. 3-12
    • Coutinho, P.M.1    Henrissat, B.2
  • 7
    • 0001849438 scopus 로고    scopus 로고
    • The modular structure of cellulases and other carbohydrate-active enzymes: An integrated database approach
    • K. Ohmiya, K. Hayashi, K. Sakka, Y. Kobayashi, S. Karita, and T. Kimura (ed.), Uni Publishers Co., Tokyo, Japan
    • Coutinho, P. M., and B. Henrissat. 1999. The modular structure of cellulases and other carbohydrate-active enzymes: an integrated database approach, p. 15-23. In K. Ohmiya, K. Hayashi, K. Sakka, Y. Kobayashi, S. Karita, and T. Kimura (ed.), Genetics, biochemistry and ecology of cellulose degradation. Uni Publishers Co., Tokyo, Japan.
    • (1999) Genetics, Biochemistry and Ecology of Cellulose Degradation , pp. 15-23
    • Coutinho, P.M.1    Henrissat, B.2
  • 8
    • 0042847292 scopus 로고    scopus 로고
    • Characterization of XYN10B, a modular xylanase from the ruminal protozoan Polyplastron multivesiculatum, with a family 22 carbohydrate-binding module that binds to cellulose
    • Devillard, E., C. Bera-Maillet, H. J. Flint, K. P. Scott, C. J. Newbold, R. J. Wallace, J. P. Jouany, and E. Forano. 2003. Characterization of XYN10B, a modular xylanase from the ruminal protozoan Polyplastron multivesiculatum, with a family 22 carbohydrate-binding module that binds to cellulose. Biochem. J. 373:495-503.
    • (2003) Biochem. J. , vol.373 , pp. 495-503
    • Devillard, E.1    Bera-Maillet, C.2    Flint, H.J.3    Scott, K.P.4    Newbold, C.J.5    Wallace, R.J.6    Jouany, J.P.7    Forano, E.8
  • 9
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: A maximum likelihood approach
    • Felsenstein, J. 1981. Evolutionary trees from DNA sequences: a maximum likelihood approach. J. Mol. Evol. 17:368-376.
    • (1981) J. Mol. Evol. , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 10
    • 0000122573 scopus 로고
    • PHYLIP - Phylogeny inference package version 3.5
    • Felsenstein, J. 1989. PHYLIP-phylogeny inference package version 3.5. Cladistics 5:164-166.
    • (1989) Cladistics , vol.5 , pp. 164-166
    • Felsenstein, J.1
  • 11
    • 0033567339 scopus 로고    scopus 로고
    • Homologous xylanases from Clostridium thermocellum: Evidence for bi-functional activity, synergism between xylanase catalytic modules and the presence of xylan-binding domains in enzyme complexes
    • Fernandes, A. C., C. M. Fontes, H. J. Gilbert, G. P. Hazlewood, T. H. Fernandes, and L. M. Ferreira. 1999. Homologous xylanases from Clostridium thermocellum: evidence for bi-functional activity, synergism between xylanase catalytic modules and the presence of xylan-binding domains in enzyme complexes. Biochem. J. 342:105-110.
    • (1999) Biochem. J. , vol.342 , pp. 105-110
    • Fernandes, A.C.1    Fontes, C.M.2    Gilbert, H.J.3    Hazlewood, G.P.4    Fernandes, T.H.5    Ferreira, L.M.6
  • 12
    • 0028949132 scopus 로고
    • Evidence for a general role for non-catalytic thermostabilizing domains in xylanases from thermophilic bacteria
    • Fontes, C. M., G. P. Hazlewood, E. Morag, J. Hall, B. H. Hirst, and H. J. Gilbert. 1995. Evidence for a general role for non-catalytic thermostabilizing domains in xylanases from thermophilic bacteria. Biochem. J. 307:151-158.
    • (1995) Biochem. J. , vol.307 , pp. 151-158
    • Fontes, C.M.1    Hazlewood, G.P.2    Morag, E.3    Hall, J.4    Hirst, B.H.5    Gilbert, H.J.6
  • 13
    • 0025766291 scopus 로고
    • Miniaturization of three carbohydrate analyses using a microsample plate reader
    • Fox, J. D., and J. F. Robyt. 1991. Miniaturization of three carbohydrate analyses using a microsample plate reader. Anal. Biochem. 195:93-96.
    • (1991) Anal. Biochem. , vol.195 , pp. 93-96
    • Fox, J.D.1    Robyt, J.F.2
  • 14
    • 0025804758 scopus 로고
    • Domains in microbial β-1,4-glycanases: Sequence conservation, function, and enzyme families
    • Gilkes, N. R., B. Henrissat, D. G. Kilburn, R. C. Miller, Jr., and R. A. J. Warren. 1991. Domains in microbial β-1,4-glycanases: sequence conservation, function, and enzyme families. Microbiol. Rev. 55:303-315.
    • (1991) Microbiol. Rev. , vol.55 , pp. 303-315
    • Gilkes, N.R.1    Henrissat, B.2    Kilburn, D.G.3    Miller Jr., R.C.4    Warren, R.A.J.5
  • 15
    • 0036145787 scopus 로고    scopus 로고
    • Polysaccharide analysis using carbohydrate gel electrophoresis: A method to study plant cell wall polysaccharides and polysaccharide hydrolases
    • Goubet, F., P. Jackson, M. J. Deery, and P. Dupree. 2002. Polysaccharide analysis using carbohydrate gel electrophoresis: a method to study plant cell wall polysaccharides and polysaccharide hydrolases. Anal. Biochem. 300:53-68.
    • (2002) Anal. Biochem. , vol.300 , pp. 53-68
    • Goubet, F.1    Jackson, P.2    Deery, M.J.3    Dupree, P.4
  • 16
    • 0032578420 scopus 로고    scopus 로고
    • Thermophilic xylanase from Thermomyces lanuginosus: High-resolution X-ray structure and modeling studies
    • Gruber, K., G. Klintschar, M. Hayn, A. Schlacher, W. Steiner, and C. Kratky. 1998. Thermophilic xylanase from Thermomyces lanuginosus: high-resolution X-ray structure and modeling studies. Biochemistry 37:13475-13485.
    • (1998) Biochemistry , vol.37 , pp. 13475-13485
    • Gruber, K.1    Klintschar, G.2    Hayn, M.3    Schlacher, A.4    Steiner, W.5    Kratky, C.6
  • 18
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall, T. A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 41:95-98.
    • (1999) Nucleic Acids Symp. Ser. , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 19
    • 0037799892 scopus 로고    scopus 로고
    • The modular architecture of Cellvibrio japonicus mannanases in glycoside hydrolase families 5 and 26 points to differences in their role in mannan degradation
    • Hogg, D., G. Pell, P. Dupree, F. Goubet, S. M. Martin-Orue, S. Armand, and H. J. Gilbert. 2003. The modular architecture of Cellvibrio japonicus mannanases in glycoside hydrolase families 5 and 26 points to differences in their role in mannan degradation. Biochem. J. 371:1027-1043.
    • (2003) Biochem. J. , vol.371 , pp. 1027-1043
    • Hogg, D.1    Pell, G.2    Dupree, P.3    Goubet, F.4    Martin-Orue, S.M.5    Armand, S.6    Gilbert, H.J.7
  • 20
    • 0003730427 scopus 로고
    • Tropical Science Center, San Jose, Costa Rica
    • Holdridge, L. R. 1967. Life zone ecology. Tropical Science Center, San Jose, Costa Rica.
    • (1967) Life Zone Ecology
    • Holdridge, L.R.1
  • 21
    • 0011760009 scopus 로고    scopus 로고
    • How polyphagous are Costa Rican dry forest saturniid moth caterpillars?
    • Y. Basset, V. Novotny, S. E. Miller, and R. Kitching (ed.), Cambridge University Press, Cambridge, United Kingdom
    • Janzen, D. H. 2003. How polyphagous are Costa Rican dry forest saturniid moth caterpillars?, p. 369-380. In Y. Basset, V. Novotny, S. E. Miller, and R. Kitching (ed.), Arthropods of tropical forests: spatio-temporal dynamics and resource use in the canopy. Cambridge University Press, Cambridge, United Kingdom.
    • (2003) Arthropods of Tropical Forests: Spatio-Temporal Dynamics and Resource Use in the Canopy , pp. 369-380
    • Janzen, D.H.1
  • 24
    • 0031983981 scopus 로고    scopus 로고
    • Identification of a region responsible for binding to the cell wall within the S-layer protein of Clostridium thermocellum
    • Lemaire, M., I. Miras, P. Gounon, and P. Beguin. 1998. Identification of a region responsible for binding to the cell wall within the S-layer protein of Clostridium thermocellum. Microbiology 144:211-217.
    • (1998) Microbiology , vol.144 , pp. 211-217
    • Lemaire, M.1    Miras, I.2    Gounon, P.3    Beguin, P.4
  • 26
    • 0032163308 scopus 로고    scopus 로고
    • Distribution and abundance of Antennopsis gallica (Hyphomycetes: Gleohaustoriales), an ectoparasitic fungus, on the eastern subterranean termite in Canada
    • Myles, T. G., B. H. Strack, and B. Forschler. 1998. Distribution and abundance of Antennopsis gallica (Hyphomycetes: gleohaustoriales), an ectoparasitic fungus, on the eastern subterranean termite in Canada. J. Invertebr. Pathol. 72:132-137.
    • (1998) J. Invertebr. Pathol. , vol.72 , pp. 132-137
    • Myles, T.G.1    Strack, B.H.2    Forschler, B.3
  • 27
    • 0037006986 scopus 로고    scopus 로고
    • High-resolution crystal structures of the lectin-like xylan binding domain from Streptomyces lividans xylanase 10A with bound substrates reveal a novel mode of xylan binding
    • Notenboom, V., A. B. Boraston, S. J. Williams, D. G. Kilburn, and D. R. Rose. 2002. High-resolution crystal structures of the lectin-like xylan binding domain from Streptomyces lividans xylanase 10A with bound substrates reveal a novel mode of xylan binding. Biochemistry 41:4246-4254.
    • (2002) Biochemistry , vol.41 , pp. 4246-4254
    • Notenboom, V.1    Boraston, A.B.2    Williams, S.J.3    Kilburn, D.G.4    Rose, D.R.5
  • 28
    • 0032699956 scopus 로고    scopus 로고
    • Phylogenetic relationships of symbiotic spirochetes in the gut of diverse termites
    • Ohkuma, M., T. Iida, and T. Kudo. 1999. Phylogenetic relationships of symbiotic spirochetes in the gut of diverse termites. FEMS Microbiol. Lett. 181:123-129.
    • (1999) FEMS Microbiol. Lett. , vol.181 , pp. 123-129
    • Ohkuma, M.1    Iida, T.2    Kudo, T.3
  • 29
    • 0030031972 scopus 로고    scopus 로고
    • Phylogenetic diversity of the intestinal bacterial community in the termite Reticulitermes speratus
    • Ohkuma, M., and T. Kudo. 1996. Phylogenetic diversity of the intestinal bacterial community in the termite Reticulitermes speratus. Appl. Environ. Microbiol. 62:461-468.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 461-468
    • Ohkuma, M.1    Kudo, T.2
  • 30
    • 0030203863 scopus 로고    scopus 로고
    • TreeView: An application to display phylogenetic trees on personal computers
    • Page, R. D. 1996. TreeView: an application to display phylogenetic trees on personal computers. Comput. Appl. Biosci. 12:357-358.
    • (1996) Comput. Appl. Biosci. , vol.12 , pp. 357-358
    • Page, R.D.1
  • 32
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 33
    • 0031300142 scopus 로고    scopus 로고
    • Recombinant approaches for accessing biodiversity
    • Short, J. M. 1997. Recombinant approaches for accessing biodiversity. Nat. Biotechnol. 15:1322-1323.
    • (1997) Nat. Biotechnol. , vol.15 , pp. 1322-1323
    • Short, J.M.1
  • 34
    • 2942603641 scopus 로고    scopus 로고
    • September 1999. Protein activity screening of clones having DNA from uncultured microorganisms. U.S. patent 5,958,672
    • Short, J. M. September 1999. Protein activity screening of clones having DNA from uncultured microorganisms. U.S. patent 5,958,672.
    • Short, J.M.1
  • 35
    • 2942515371 scopus 로고    scopus 로고
    • August 2001. Gene expression library produced from DNA from uncultivated microorganisms and methods for making the same. U.S. patent 6,280,926
    • Short, J. M. August 2001. Gene expression library produced from DNA from uncultivated microorganisms and methods for making the same. U.S. patent 6,280,926.
    • Short, J.M.1
  • 36
    • 0242456905 scopus 로고    scopus 로고
    • Wood ingestion by passalid beetles in the presence of xylose-fermenting gut yeasts
    • Suh, S. O., C. J. Marshall, J. V. McHugh, and M. Blackwell. 2003. Wood ingestion by passalid beetles in the presence of xylose-fermenting gut yeasts. Mol. Ecol. 12:3137-3145.
    • (2003) Mol. Ecol. , vol.12 , pp. 3137-3145
    • Suh, S.O.1    Marshall, C.J.2    McHugh, J.V.3    Blackwell, M.4
  • 37
    • 0034653516 scopus 로고    scopus 로고
    • The thermostabilizing domain, XynA, of Caldibacillus cellulovorans xylanase is a xylan binding domain
    • Sunna, A., M. D. Gibbs, and P. L. Bergquist. 2000. The thermostabilizing domain, XynA, of Caldibacillus cellulovorans xylanase is a xylan binding domain. Biochem. J. 346:583-586.
    • (2000) Biochem. J. , vol.346 , pp. 583-586
    • Sunna, A.1    Gibbs, M.D.2    Bergquist, P.L.3
  • 38
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 39
    • 0023406022 scopus 로고
    • Assay of reducing sugars in the nanomole range with 2,2′ -bicinchoninate
    • Waffenschmidt, S., and L. Jaenicke. 1987. Assay of reducing sugars in the nanomole range with 2,2′-bicinchoninate. Anal. Biochem. 165:337-340.
    • (1987) Anal. Biochem. , vol.165 , pp. 337-340
    • Waffenschmidt, S.1    Jaenicke, L.2
  • 40
    • 0028211360 scopus 로고
    • Mutational and crystallographic analyses of the active site residues of the Bacillus circulans xylanase
    • Wakarchuk, W. W., R. L. Campbell, W. L. Sung, J. Davoodi, and M. Yaguchi. 1994. Mutational and crystallographic analyses of the active site residues of the Bacillus circulans xylanase. Protein Sci. 3:467-475.
    • (1994) Protein Sci. , vol.3 , pp. 467-475
    • Wakarchuk, W.W.1    Campbell, R.L.2    Sung, W.L.3    Davoodi, J.4    Yaguchi, M.5
  • 41
    • 0036200278 scopus 로고    scopus 로고
    • Aerobic and facultatively anaerobic cellulolytic bacteria from the gut of the termite Zootermopsis angusticollis
    • Wenzel, M., I. Schonig, M. Berchtold, P. Kampfer, and H. Konig. 2002. Aerobic and facultatively anaerobic cellulolytic bacteria from the gut of the termite Zootermopsis angusticollis. J. Appl. Microbiol. 92:32-40.
    • (2002) J. Appl. Microbiol. , vol.92 , pp. 32-40
    • Wenzel, M.1    Schonig, I.2    Berchtold, M.3    Kampfer, P.4    Konig, H.5
  • 42
    • 0028901697 scopus 로고
    • Identification of a novel cellulose-binding domain within the multidomain 120 kDa xylanase XynA of the hyperthermophilic bacterium Thermotoga maritima
    • Winterhalter, C., P. Heinrich, A. Candussio, G. Wich, and W. Liebl. 1995. Identification of a novel cellulose-binding domain within the multidomain 120 kDa xylanase XynA of the hyperthermophilic bacterium Thermotoga maritima. Mol. Microbiol. 15:431-444.
    • (1995) Mol. Microbiol. , vol.15 , pp. 431-444
    • Winterhalter, C.1    Heinrich, P.2    Candussio, A.3    Wich, G.4    Liebl, W.5
  • 44
    • 1642435684 scopus 로고    scopus 로고
    • Microorganisms in the gut of beetles: Evidence from molecular cloning
    • Zhang, N., S. O. Suh, and M. Blackwell. 2003. Microorganisms in the gut of beetles: evidence from molecular cloning. J. Invertebr. Pathol. 84:226-233.
    • (2003) J. Invertebr. Pathol. , vol.84 , pp. 226-233
    • Zhang, N.1    Suh, S.O.2    Blackwell, M.3


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