메뉴 건너뛰기




Volumn 89, Issue 6, 2005, Pages 4111-4121

A molecular dynamics study of the response of lipid bilayers and monolayers to trehalose

Author keywords

[No Author keywords available]

Indexed keywords

DIPALMITOYLPHOSPHATIDYLCHOLINE; LIPID; TREHALOSE;

EID: 28444481767     PISSN: 00063495     EISSN: 00063495     Source Type: Journal    
DOI: 10.1529/biophysj.105.065953     Document Type: Article
Times cited : (98)

References (47)
  • 4
    • 0034830415 scopus 로고    scopus 로고
    • Contribution of phosphate groups to the dipole potential of dimyristoylphosphatidycholine membranes
    • Diaz, S., F. Lairión, J. Arroyo, A. C. Biondi de Lopez, and E. A. Disalvo. 2001. Contribution of phosphate groups to the dipole potential of dimyristoylphosphatidycholine membranes. Langmuir. 17:852-855.
    • (2001) Langmuir , vol.17 , pp. 852-855
    • Diaz, S.1    Lairión, F.2    Arroyo, J.3    Biondi De Lopez, A.C.4    Disalvo, E.A.5
  • 6
    • 0022849090 scopus 로고
    • Theory of lipid monolayer and bilayer chain-melting phase transitions
    • Nagle, J. F. 1986. Theory of lipid monolayer and bilayer chain-melting phase transitions. Faraday Discuss. Chem. Soc. 81:151-162.
    • (1986) Faraday Discuss. Chem. Soc. , vol.81 , pp. 151-162
    • Nagle, J.F.1
  • 8
    • 0242385390 scopus 로고    scopus 로고
    • Molecular simulation study of phospholipid bilayers and insights of the interactions with disaccharides
    • Sum, A. K., R. Faller, and J. J. de Pablo. 2003. Molecular simulation study of phospholipid bilayers and insights of the interactions with disaccharides. Biophys. J. 85:2830-2844.
    • (2003) Biophys. J. , vol.85 , pp. 2830-2844
    • Sum, A.K.1    Faller, R.2    De Pablo, J.J.3
  • 9
    • 1942519438 scopus 로고    scopus 로고
    • Interaction of the disaccharide trehalose with a phospholipid bilayer: A molecular dynamics study
    • Pereira, C. S., R. D. Lins, I. Chandrasekhar, L. C. Freitas, and P. H. Hünenberger. 2004. Interaction of the disaccharide trehalose with a phospholipid bilayer: a molecular dynamics study. Biophys. J. 85:2273-2285.
    • (2004) Biophys. J. , vol.85 , pp. 2273-2285
    • Pereira, C.S.1    Lins, R.D.2    Chandrasekhar, I.3    Freitas, L.C.4    Hünenberger, P.H.5
  • 10
    • 4444359475 scopus 로고    scopus 로고
    • Molecular dynamics simulation study of the interaction of trehalose with lipid membranes
    • Villarreal, M. A., S. B. Díaz, E. A. Disalvo, and G. G. Montich. 2004. Molecular dynamics simulation study of the interaction of trehalose with lipid membranes. Langmuir. 20:7844-7851.
    • (2004) Langmuir , vol.20 , pp. 7844-7851
    • Villarreal, M.A.1    Díaz, S.B.2    Disalvo, E.A.3    Montich, G.G.4
  • 11
    • 0348053809 scopus 로고
    • Preservation of membranes in any hydrobiotic organisms
    • Crowe, J. H., L. M. Crowe, and D. Chapman. 1984. Preservation of membranes in any hydrobiotic organisms. Science. 223:701-703.
    • (1984) Science , vol.223 , pp. 701-703
    • Crowe, J.H.1    Crowe, L.M.2    Chapman, D.3
  • 13
    • 15744368593 scopus 로고    scopus 로고
    • An ab initio study on the torsional surface of alkanes and its effect on molecular simulations of alkanes and a DPPC bilayer
    • Klauda, J. B., B. R. Brooks, A. D. MacKerell, Jr., R. M. Venable, and R. W. Pastor. 2005. An ab initio study on the torsional surface of alkanes and its effect on molecular simulations of alkanes and a DPPC bilayer. J. Phys. Chem. B. 109:5300-5311.
    • (2005) J. Phys. Chem. B , vol.109 , pp. 5300-5311
    • Klauda, J.B.1    Brooks, B.R.2    MacKerell Jr., A.D.3    Venable, R.M.4    Pastor, R.W.5
  • 14
    • 0036771632 scopus 로고    scopus 로고
    • Carbohydrate solution simulations: Producing a force field with experimentally consistent primary alcohol rotational frequencies and populations
    • Kuttel, M., J. W. Brady, and K. J. Naidoo. 2002. Carbohydrate solution simulations: producing a force field with experimentally consistent primary alcohol rotational frequencies and populations. J. Comput. Chem. 23:1236-1243.
    • (2002) J. Comput. Chem. , vol.23 , pp. 1236-1243
    • Kuttel, M.1    Brady, J.W.2    Naidoo, K.J.3
  • 16
    • 33751157933 scopus 로고
    • Solvent-induced forces between 2 hydrophillic groups
    • Durell, S. R., B. R. Brooks, and A. Ben-Naim. 1994. Solvent-induced forces between 2 hydrophillic groups. J. Phys. Chem. 98:2198-2202.
    • (1994) J. Phys. Chem. , vol.98 , pp. 2198-2202
    • Durell, S.R.1    Brooks, B.R.2    Ben-Naim, A.3
  • 17
    • 0034250744 scopus 로고    scopus 로고
    • An improved empirical potential energy function for molecular simulations of phospholipids
    • Feller, S. E., and A. D. MacKerell. 2000. An improved empirical potential energy function for molecular simulations of phospholipids. J. Phys. Chem. B. 104:7510-7515.
    • (2000) J. Phys. Chem. B , vol.104 , pp. 7510-7515
    • Feller, S.E.1    MacKerell, A.D.2
  • 18
    • 0001538909 scopus 로고
    • Canonical dynamics: Equilibrium phase-space distributions
    • Hoover, W. G. 1985. Canonical dynamics: equilibrium phase-space distributions. Phys. Rev. A. 31:1695-1697.
    • (1985) Phys. Rev. A , vol.31 , pp. 1695-1697
    • Hoover, W.G.1
  • 19
    • 84926811618 scopus 로고
    • Constant pressure molecular dynamics for molecular systems
    • Nose, S., and M. L. Klein. 1983. Constant pressure molecular dynamics for molecular systems. Mol. Phys. 50:1055-1076.
    • (1983) Mol. Phys. , vol.50 , pp. 1055-1076
    • Nose, S.1    Klein, M.L.2
  • 21
    • 33646940952 scopus 로고
    • Numerical integration of the Cartesian equations of motion of a system with constraints: Molecular dynamics of n-alkanes
    • Ryckaert, W. E., G. Ciccotti, and H. J. C. Berendsen. 1977. Numerical integration of the Cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes. J. Comput. Phys. 23:327-341.
    • (1977) J. Comput. Phys. , vol.23 , pp. 327-341
    • Ryckaert, W.E.1    Ciccotti, G.2    Berendsen, H.J.C.3
  • 24
    • 0000868022 scopus 로고
    • Computer simulation of liquid/liquid interfaces. I. Theory and application to octane/water
    • Zhang, Y., S. E. Feller, B. R. Brooks, and R. W. Pastor. 1995. Computer simulation of liquid/liquid interfaces. I. Theory and application to octane/water. J. Chem. Phys. 103:10252-10266.
    • (1995) J. Chem. Phys. , vol.103 , pp. 10252-10266
    • Zhang, Y.1    Feller, S.E.2    Brooks, B.R.3    Pastor, R.W.4
  • 26
    • 1642455952 scopus 로고    scopus 로고
    • Pressure-based long-range correction for Lennard-Jones interactions in molecular dynamics simulations: Application to alkanes and interfaces
    • Lagüe, P., R. W. Pastor, and B. R. Brooks. 2004. Pressure-based long-range correction for Lennard-Jones interactions in molecular dynamics simulations: application to alkanes and interfaces. J. Phys. Chem. B. 108:363-368.
    • (2004) J. Phys. Chem. B , vol.108 , pp. 363-368
    • Lagüe, P.1    Pastor, R.W.2    Brooks, B.R.3
  • 27
    • 0000341366 scopus 로고
    • Molecular dynamics simulation of galanin in aqueous and nonaqueous solution
    • DeLoof, H., L. Nilsson, and R. Rigler. 1992. Molecular dynamics simulation of galanin in aqueous and nonaqueous solution. J. Am. Chem. Soc. 114:4028-4035.
    • (1992) J. Am. Chem. Soc. , vol.114 , pp. 4028-4035
    • Deloof, H.1    Nilsson, L.2    Rigler, R.3
  • 28
    • 0000951252 scopus 로고    scopus 로고
    • The effect of electrostatic force truncation on interfacial and transport properties of water
    • Feller, S. E., R. W. Pastor, A. Rojnuckarin, S. Bogusz, and B. R. Brooks. 1996. The effect of electrostatic force truncation on interfacial and transport properties of water. J. Phys. Chem. 100:17011-17020.
    • (1996) J. Phys. Chem. , vol.100 , pp. 17011-17020
    • Feller, S.E.1    Pastor, R.W.2    Rojnuckarin, A.3    Bogusz, S.4    Brooks, B.R.5
  • 29
    • 0001478785 scopus 로고
    • Crystal structure of alpha,alpha-trehalose dihydrate from 3 independent x-ray determinations
    • Brown, G. M., D. C. Rohrer, B. Berking, C. A. Beevers, R. O. Gould, and R. Simpson. 1972. Crystal structure of alpha,alpha-trehalose dihydrate from 3 independent x-ray determinations. Acta Crystallogr. B. 28:3134-3158.
    • (1972) Acta Crystallogr. B , vol.28 , pp. 3134-3158
    • Brown, G.M.1    Rohrer, D.C.2    Berking, B.3    Beevers, C.A.4    Gould, R.O.5    Simpson, R.6
  • 30
    • 0016283654 scopus 로고
    • The dynamic structure of fatty acyl chains in a phospholipid bilayer measured by deuterium magnetic resonance
    • Seelig, A., and J. Seelig. 1974. The dynamic structure of fatty acyl chains in a phospholipid bilayer measured by deuterium magnetic resonance. Biochemistry. 13:4839-4845.
    • (1974) Biochemistry , vol.13 , pp. 4839-4845
    • Seelig, A.1    Seelig, J.2
  • 31
    • 0018792901 scopus 로고
    • Neutron diffraction studies on phosphatidylcholine model membranes. I. Head group conformation
    • Büldt, G., H. U. Gally, J. Seelig, and G. Zaccai. 1979. Neutron diffraction studies on phosphatidylcholine model membranes. I. Head group conformation. J. Mol. Biol. 134:673-691.
    • (1979) J. Mol. Biol. , vol.134 , pp. 673-691
    • Büldt, G.1    Gally, H.U.2    Seelig, J.3    Zaccai, G.4
  • 32
    • 0018792917 scopus 로고
    • Neutron diffraction studies on phosphatidylcholine model membranes. II. Chain conformation and segmental disorder
    • Zaccai, G., G. Büldt, A. Seelig, and J. Seelig. 1979. Neutron diffraction studies on phosphatidylcholine model membranes. II. Chain conformation and segmental disorder. J. Mol. Biol. 134:693-706.
    • (1979) J. Mol. Biol. , vol.134 , pp. 693-706
    • Zaccai, G.1    Büldt, G.2    Seelig, A.3    Seelig, J.4
  • 33
    • 0000514167 scopus 로고
    • Molecular and stochastic dynamics simulation of lipid membranes
    • W. F. van Gunsteren, P. K. Weiner, and A. K. Wilkinson, editors. ESCOM Science Publishers, Leiden, The Netherlands
    • Pastor, R. W., and R. M. Venable. 1993. Molecular and stochastic dynamics simulation of lipid membranes. In Computer Simulation of Biomolecular Systems: Theoretical and Experimental Applications. W. F. van Gunsteren, P. K. Weiner, and A. K. Wilkinson, editors. ESCOM Science Publishers, Leiden, The Netherlands. 443-463.
    • (1993) Computer Simulation of Biomolecular Systems: Theoretical and Experimental Applications , pp. 443-463
    • Pastor, R.W.1    Venable, R.M.2
  • 34
    • 0004220203 scopus 로고    scopus 로고
    • Trehalose + water fragile system: Properties and glass transition
    • Elias, M. E., and A. M. Elias. 1999. Trehalose + water fragile system: properties and glass transition. J. Mol. Liquids. 83:303-310.
    • (1999) J. Mol. Liquids , vol.83 , pp. 303-310
    • Elias, M.E.1    Elias, A.M.2
  • 35
    • 0032787326 scopus 로고    scopus 로고
    • Persistence of phase coexistence in disaturated phosphatidylcholine monolayers at high surface pressures
    • Crane, J., G. G. Putz, and S. Hall. 1999. Persistence of phase coexistence in disaturated phosphatidylcholine monolayers at high surface pressures. Biophys. J. 77:3134-3143.
    • (1999) Biophys. J. , vol.77 , pp. 3134-3143
    • Crane, J.1    Putz, G.G.2    Hall, S.3
  • 36
    • 0021869659 scopus 로고
    • 1-Palmitoyl-2-pyrenedecanoyl glycerophospholipids as membrane probes: Evidence for regular distribution in liquid-crystalline phosphatidylcholine bilayers
    • Somerharju, P. J., J. A. Virtanen, K. K. Eklund, P. Vainio, and P. K. J. Kinnuenen. 1985. 1-palmitoyl-2-pyrenedecanoyl glycerophospholipids as membrane probes: evidence for regular distribution in liquid-crystalline phosphatidylcholine bilayers. Biochemistry. 24:2773-2781.
    • (1985) Biochemistry , vol.24 , pp. 2773-2781
    • Somerharju, P.J.1    Virtanen, J.A.2    Eklund, K.K.3    Vainio, P.4    Kinnuenen, P.K.J.5
  • 37
    • 0033690044 scopus 로고    scopus 로고
    • Trehalose interacts with phospholipids polar head groups in Langmuir monolayers
    • Lambruschini, C., A. Relini, A. Ridi, L. Cordone, and A. Gliozzi. 2000. Trehalose interacts with phospholipids polar head groups in Langmuir monolayers. Langmuir. 16:5467-5470.
    • (2000) Langmuir , vol.16 , pp. 5467-5470
    • Lambruschini, C.1    Relini, A.2    Ridi, A.3    Cordone, L.4    Gliozzi, A.5
  • 38
    • 0029737564 scopus 로고    scopus 로고
    • What is the surface tension of a lipid bilayer membrane?
    • Jähnig, F. 1996. What is the surface tension of a lipid bilayer membrane? Biophys. J. 71:1348-1349.
    • (1996) Biophys. J. , vol.71 , pp. 1348-1349
    • Jähnig, F.1
  • 39
    • 0029767694 scopus 로고    scopus 로고
    • On simulating lipid bilayers with applied surface tension: Periodic boundary conditions and undulations
    • Feller, S. E., and R. W. Pastor. 1996. On simulating lipid bilayers with applied surface tension: periodic boundary conditions and undulations. Biophys. J. 71:1350-1355.
    • (1996) Biophys. J. , vol.71 , pp. 1350-1355
    • Feller, S.E.1    Pastor, R.W.2
  • 40
    • 0034271962 scopus 로고    scopus 로고
    • Spatial and energetic-entropic decomposition of surface tension in lipid bilayers from molecular dynamics simulations
    • Lindahl, E., and O. Edholm. 2000. Spatial and energetic-entropic decomposition of surface tension in lipid bilayers from molecular dynamics simulations. J. Chem. Phys. 113:3882-3893.
    • (2000) J. Chem. Phys. , vol.113 , pp. 3882-3893
    • Lindahl, E.1    Edholm, O.2
  • 41
    • 0035812110 scopus 로고    scopus 로고
    • Effect of undulations on surface tension in simulated membranes
    • Marrink, S. J., and A. E. Mark. 2001. Effect of undulations on surface tension in simulated membranes. J. Phys. Chem. B. 105:6122-6127.
    • (2001) J. Phys. Chem. B , vol.105 , pp. 6122-6127
    • Marrink, S.J.1    Mark, A.E.2
  • 42
    • 21244462687 scopus 로고    scopus 로고
    • Experimental validation of molecular dynamics simulations of lipid bilayers: A new approach
    • Benz, R. W., F. Castro-Roman, D. J. Tobias, and S. H. White. 2005. Experimental validation of molecular dynamics simulations of lipid bilayers: a new approach. Biophys. J. 88:805-817.
    • (2005) Biophys. J. , vol.88 , pp. 805-817
    • Benz, R.W.1    Castro-Roman, F.2    Tobias, D.J.3    White, S.H.4
  • 43
    • 17544375815 scopus 로고    scopus 로고
    • Methodological problems in pressure profile calculations for lipid bilayers
    • Sonne, J., F. Y. Hansen, and G. H. Peters. 2005. Methodological problems in pressure profile calculations for lipid bilayers. J. Chem. Phys. 122:124903-124911.
    • (2005) J. Chem. Phys. , vol.122 , pp. 124903-124911
    • Sonne, J.1    Hansen, F.Y.2    Peters, G.H.3
  • 44
    • 2942675244 scopus 로고    scopus 로고
    • Lipid bilayer pressure profiles and mechanosensitive channel gating
    • Gullingsrud, J., and K. Schulten. 2004. Lipid bilayer pressure profiles and mechanosensitive channel gating. Biophys. J. 86:3496-3509.
    • (2004) Biophys. J. , vol.86 , pp. 3496-3509
    • Gullingsrud, J.1    Schulten, K.2
  • 45
    • 36449007043 scopus 로고
    • Computer simulation of liquid/liquid interfaces. II. Surface tension-area dependence of a bilayer and monolayer
    • Feller, S. E., Y. Zhang, and R. W. Pastor. 1995. Computer simulation of liquid/liquid interfaces. II. Surface tension-area dependence of a bilayer and monolayer. J. Chem. Phys. 103:10267-10276.
    • (1995) J. Chem. Phys. , vol.103 , pp. 10267-10276
    • Feller, S.E.1    Zhang, Y.2    Pastor, R.W.3
  • 46
    • 0032614136 scopus 로고    scopus 로고
    • Constant surface tension simulations of lipid bilayers: The sensitivity of surface areas and compressibilities
    • Feller, S. E., and R. W. Pastor. 1999. Constant surface tension simulations of lipid bilayers: the sensitivity of surface areas and compressibilities. J. Chem. Phys. 111:1281-1287.
    • (1999) J. Chem. Phys. , vol.111 , pp. 1281-1287
    • Feller, S.E.1    Pastor, R.W.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.