Bayesian analysis of allozyme markers indicates a single genetic population of kingklip Genypterus capensis off South Africa

African Journal of Marine Science

Volumn 27, Issue 2, 2005, Pages 479-485

  Grant, W S ^a,b   Leslie, R W ^c  

^a UNIVERSITY OF CAPE TOWN   (South Africa)

^b UNIVERSITY OF ALASKA ANCHORAGE   (United States)

^c MARINE AND COASTAL MANAGEMENT   (South Africa)

Author keywords

Allozymes; Genypterus capensis; Marine fish; Population genetics; Southern Africa

Indexed keywords

ALLOZYME; BAYESIAN ANALYSIS; FISHERY MANAGEMENT; POPULATION GENETICS; STOCK IDENTIFICATION;

AFRICA; SOUTH AFRICA; SOUTHERN AFRICA; SUB-SAHARAN AFRICA;

GENYPTERUS CAPENSIS; MERLUCCIUS; MERLUCCIUS CAPENSIS;

EID: 28444475226     PISSN: 1814232X     EISSN: None     Source Type: Journal    
DOI: 10.2989/18142320509504106     Document Type: Article

References (41)

1. AEBERSOLD, P. B., WINANS, G. A., TEEL, D. J., MILNER, G. B. and F. M. UTTER 1987 - Manual for starch gel electrophoresis: a method for the detection of genetic variation. NOAA tech. Rep. 61: 1-19.
2. BEACHAM, T. D., BRATTEY, J., MILLER, K. M., LE, K. D. and R. E. WITHLER 2002 - Multiple stock structure of Atlantic cod (Gadus morhua) off Newfoundland and Labrador determined from genetic variation. ICES J. mar. Sci. 59: 650-665.
3. BECKER, I. I., GRANT, W. S., KIRBY, R. W. and F. T. ROBB 1988 - Evolutionary divergence between sympatric species of southern African hakes, Merluccius capensis and M. paradoxus. 2. Restriction enzyme analysis of mitochondrial DNA. Heredity 61: 21-30.
4. BOWEN, B. W., BASS, A. L., ROCHA, L. A., GRANT, W. S. and D. R. ROBERTSON 2001 - Phylogeography of the trumpetfishes Aulostomus: ring species complex on a global scale. Evolution 55: 1029-1039.
5. BOWEN, B. W. and W. S. GRANT 1997 - Phylogeography of the sardines (Sardinops spp.): assessing biogeographic models and population histories in temperate upwelling zones. Evolution 51: 1601-1610.
6. COLMAN, J. A. 1995 - Regional morphometric variation in ling (Genypterus blacodes) in New Zealand waters. N. Z. Jl mar. Freshwat. Res. 29: 163-173.
7. DOHERTY, P. J., PLANES, S. and P. MATHER 1995 - Gene flow and larval duration in seven species of fish from the Great Barrier Reef. Ecology 76: 2373-2391.
8. GOUDET, J. 1995 - FSTAT (Version 1.2): a computer program to calculate F-statistics. J. Hered. 86: 485-486.
9. GRANT, W. S. 1985a - Biochemical genetic stock structure of the southern African anchovy, Engraulis capensis Gilchrist. J. Fish Biol. 27: 23-29.
10. GRANT, W. S. 1985b - Population genetics of the southern African pilchard, Sardinops ocellata, in the Benguela upwelling system. In International Symposium on the Most Important Upwelling Areas off Western Africa (Cape Blanco and Benguela), [Barcelona, 1983] 1. Bas, C., Margalef, R. and P. Rubiés (Eds). Barcelona; Instituto de Investigaciones Pesqueras: 551-562.
11. GRANT, W. S. and B. W. BOWEN 1998 - Shallow population histories in deep evolutionary lineages of marine fishes: insights from sardines and anchovies and lesson for conservation. J. Hered. 89: 415-426.
12. GRANT, W. S. and R. W. LESLIE 1996 - Late Pleistocene dispersal of Indian-Pacific sardine populations in an ancient lineage of the genus Sardinops. Mar. Biol. 126: 133-142.
13. GRANT, W. S., LESLIE, R. W. and I. I. BECKER 1987 - Genetic stock structure of the southern African hakes Merluccius capensis and M. paradoxus. Mar. Ecol. Prog. Ser. 41: 9-20.
14. LESLIE, R. W. and W. S. GRANT 1990 - Lack of congruence between genetic and morphological stock structure of the southern African anglerfish Lophius vomerinus. S. Afr. J. mar. Sci. 9: 379-398.
15. MACPHERSON, E. 1983 - Feeding pattern of the kingklip (Genypterus capensis) and its effect on the hake (Merluccius capensis) resource off the coast of Namibia. Mar. Biol. 78(1): 105-112.
16. MORI, M. and D. S. BUTTERWORTH 2002 - An updated assessment for the South African kingklip resource. Unpublished Report, Marine and Coastal Management, Department of Environmental Affairs and Tourism, South Africa. WG/10/02/D:KK:19: 1-34 + Appendix 1-4.
17. MURPHY, R. W., SITES, J. W., BUTH D. G. and C. H. HAUFLER 1996 - Proteins: isozyme electrophoresis. In Molecular Systematics, 2nd ed. Hillis, D. M. Moritz, C. and B. K. Mable (Eds). Sunderland, Massachusetts; Sinauer Assoc: 51-120.
18. NAISH, K-A. 1990 - The stock identification of the Cape horse mackerel, Trachurus trachurus capensis (Pisces: Carangidae). M.Sc. thesis, Rhodes University: 111 pp.
19. NEI, M. 1978 - Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89: 583-590.
20. NESBØ, C. L., RUENESS, E. K., IVERSEN, S. A., SKAGEN, D. W. and K. S. JAKOBSEN 2000 - Phylogeography and population history of Atlantic mackerel (Scomber scombrus L.): a genealogical approach reveals genetic structuring among the eastern Atlantic stocks. Proc. R. Soc., Lond. B 267: 281-191.
21. NIELSEN, E. E., HANSEN, M. M., SCHMIDT, C., MELDRUP, D. and P. GRØNKJÆR 2001 - Population of origin of Atlantic cod. Nature, Lond. 413: p. 272.
22. NIELSEN, J. G., COHEN, D. M., MARKLE, D. F. and C. R. ROBINS 1999 - Ophidiiform fishes of the world (order Ophidiiformes). An annotated and illustrated catalogue of pearlfishes, cusk-eels, brotulas and other ophidiiform fishes known to date. FAO Fisheries Synopsis 125, 18. Rome; FAO: 178 pp.
23. OLSEN, J. B., MERKOURIS, S. E. and J. E. SEEB 2002 - An examination of spatial and temporal genetic variation in walleye pollock (Theragra chalcogramma) using allozyme, mitochondrial DNA, and microsatellite data. Fishery Bull., Wash. 100: 752-764.
24. PAYNE, A. I. L. 1977 - Stock differentiation and growth of the southern African kingklip Genypterus capensis. Investl Rep. Sea Fish. Brch S. Afr. 113: 32 pp.
25. PAYNE, A. I. L. 1985 - Growth and stock differentiation of kingklip (Genypterus capensis) on the south-east coast of South Africa. S. Afr. J. Zool. 20(2): 49-56.
26. PAYNE, A. I. L. and A. BADENHORST 1995 - Other groundfish resources. In Oceans of Life off Southern Africa, 2nd ed. Payne, A. I. L. and R. J. M. Crawford (Eds). Cape Town; Vlaeberg: 148-156.
27. PRITCHARD, J. K., STEPHENS, M. and P. DONNELLY 2000 - Inference of population structure using multilocus genotype data. Genetics 155: 945-959.
28. PUNT, A. E. and D. W. JAPP 1994 - Stock assessment of the kingklip Genypterus capensis off South Africa. S. Afr. J. mar. Sci. 14: 133-149.
29. RIVERA, M. A. J., KELLEY, C. D. and G. K. RODERICK 2004 - Subtle population genetic structure in the Hawaiian grouper, Epinephelus quernus (Serranidae) as revealed by mitochondrial DNA analyses. Biol. J. Linn. Soc. Lond. 81: 449-468.
30. SHANNON, L. V. 1985 - The Benguela ecosystem. 1. Evolution of the Benguela, physical features and processes. In Oceanography and Marine Biology. An Annual Review 23. Barnes, M. (Ed.). Aberdeen; University Press: 105-182.
31. SMITH, M. M. and P. C. HEEMSTRA (Eds) 1986 - Smiths' Sea Fishes. Johannesburg; Macmillan: xx + 1047 pp.
32. SMITH, P. J. 1979 - Glucosephosphate isomerase and phosphoglucomutase polymorphisms in the New Zealand ling Genypterus blacodes. Comp. Biochem. Physiol. 62B: 573-577.
33. SMITH, P. J. and R. I. C. C. FRANCIS 1982 - A glucosephosphate isomerase polymorphism in New Zealand ling Genypterus blacodes. Comp. Biochem. Physiol. 73B: 451-455.
34. SMITH, P. J. and C. D. PAULIN 2003 - Genetic and morphological evidence for a single species of pink ling (Genypterus blacodes) in New Zealand waters. N. Z. Jl mar. Freshwat. Res. 37: 183-194.
35. rd ed. New York; Freeman: 887 pp.
36. UTTER, F. M., AEBERSOLD, P. and G. WINANS 1987 - Interpreting genetic variation detected by electrophoresis. In Population Genetics and Fishery Management. Ryman, R. and F.M. Utter (Eds). Seattle; University of Washington Press: 21-45.
37. WAPLES, R. S. 1987 - A multispecies approach to the analysis of gene flow in marine shore fishes. Evolution 41(2): 385-400.
38. WAPLES, R. S. 1998 - Separating the wheat from the chaff: patterns of genetic differentiation in high gene flow species. J. Hered. 89: 438-450.
39. WARD, R. D., APPLEYARD, S. A., DALEY, R. K. and A. REILLY 2001 - Population structure of pink ling (Genypterus blacodes) from south-eastern Australian waters, inferred from allozyme and microsatellite analyses. Mar. Freshwat. Res. 52: 965-973.
40. WEIR, B. S. and C. C. COCKERHAM 1984 - Estimating F-Statistics for the analysis of population structure. Evolution 38: 1358-1370.
41. WRIGHT, S. 1951 - The genetical structure of populations. Ann. Eugen. 15: 323-354.