GARSA: Genomic analysis resources for sequence annotation

Bioinformatics

Volumn 21, Issue 23, 2005, Pages 4302-4303

  Dávila, Alberto M R ^a,f   Lorenzini, Daniel M ^b   Mendes, Pablo N ^c   Satake, Thiago S ^d   Sousa, Gabriel R ^a,f   Campos, Linair M ^b   Mazzoni, Camila J ^a   Wagner, Glauber ^a,f   Pires, Paulo F ^c   Grisard, Edmundo C ^b   Cavalcanti, Maria C R ^e   Campos, Maria Luiza M ^c  

^a INSTITUTO OSWALDO CRUZ   (Brazil)

^b FEDERAL UNIVERSITY OF SANTA CATARINA   (Brazil)

^c FEDERAL UNIVERSITY OF RIO DE JANEIRO   (Brazil)

^d FEDERAL UNIVERSITY OF PARANÁ   (Brazil)

^e MILITARY INSTITUTE OF ENGINEERING   (Brazil)

^f Bioinformatics and Molecular Evolutionary Genetics Group   (Brazil)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BIOINFORMATICS; CHROMATOGRAPHY; COMPUTER PROGRAM; EXPRESSED SEQUENCE TAG; GENBANK; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC DATABASE; INTERNET; NONHUMAN; PHYLOGENY; PRIORITY JOURNAL; PSYCHODIDAE; SNAKE; TRYPANOSOMA; TRYPANOSOMA VIVAX;

BOTHROPS JARARACA; LUTZOMYIA LONGIPALPIS; PIARACTUS MESOPOTAMICUS; PSYCHODIDAE; TRYPANOSOMA; TRYPANOSOMA RANGELI; TRYPANOSOMA VIVAX;

EID: 28444458843     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/bti705     Document Type: Article

References (10)

1. Crooks,G.E. et al. (2004) WebLogo: A sequence logo generator. Genome Res., 14, 1188-1190.
2. Felsenstein,J. (1989) PHYLIP - Phylogeny Inference Package (Version 3.2). Cladistics, 5, 164-166.
3. Guerreiro,L.T. et al. (2005) Exploring the genome of Trypanosoma vivax through GSS and in silico comparative analysis. OMICS 9, 116-128.
4. Huang,X. and Madan,A. (1999) CAP3: A DNA sequence assembly program. Genome Res., 9, 868-877.
5. Mao,C. et al. (2003) ESTAP - an automated system for the analysis of EST data. Bioinformatics, 19, 1720-1722.
6. Paquola,A.C. et al. (2003) ESTWeb: Bioinformatics services for EST sequencing projects. Bioinformatics, 19, 1587-1588.
7. Rice,P. et al. (2000) EMBOSS: The european molecular biology open software suite. Trends Genet., 16, 276-277.
8. Tech,M. and Merkl,R. (2003) YACOP: Enhanced gene prediction obtained by a combination of existing methods. In Silico Biol., 3, 441-451.
9. Thompson,J.D. et al. (1994) CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res., 22, 4673-4680.
10. Xu,H. et al. (2003) EST pipeline system: Detailed and automated EST data processing and mining. Genomics Proteomics Bioinformatics, 1, 236-242.