메뉴 건너뛰기




Volumn 89, Issue 6, 2005, Pages 3822-3836

A flexible approach to the calculation of resonance energy transfer efficiency between multiple donors and acceptors in complex geometries

Author keywords

[No Author keywords available]

Indexed keywords

FLUORINE DERIVATIVE; POLYMER; PROTEIN; UNCLASSIFIED DRUG;

EID: 28444437454     PISSN: 00063495     EISSN: 00063495     Source Type: Journal    
DOI: 10.1529/biophysj.105.069351     Document Type: Article
Times cited : (80)

References (35)
  • 1
    • 27744599888 scopus 로고
    • Transfer mechanisms of electronic excitation
    • Förster, T. 1959. Transfer mechanisms of electronic excitation. Discuss. Faraday Soc. 27:7-17.
    • (1959) Discuss. Faraday Soc. , vol.27 , pp. 7-17
    • Förster, T.1
  • 3
    • 1842563953 scopus 로고    scopus 로고
    • Fluorescence resonance energy transfer (FRET)
    • X.F. Wang and B. Herman, editors. Wiley, New York
    • Clegg, R. M. 1996. Fluorescence resonance energy transfer (FRET). In Fluorescence Imaging Spectroscopy and Microscopy. X.F. Wang and B. Herman, editors. Wiley, New York. 179-252.
    • (1996) Fluorescence Imaging Spectroscopy and Microscopy , pp. 179-252
    • Clegg, R.M.1
  • 5
    • 0016502735 scopus 로고
    • Distribution of end-to-end distances of oligopeptides in solution as estimated by energy transfer
    • Haas, E., M. Wilchek, E. Katchalski-Katzir, and I. Z. Steinberg. 1975. Distribution of end-to-end distances of oligopeptides in solution as estimated by energy transfer. Proc. Natl. Acad. Sci. USA. 72:1807-1811.
    • (1975) Proc. Natl. Acad. Sci. USA , vol.72 , pp. 1807-1811
    • Haas, E.1    Wilchek, M.2    Katchalski-Katzir, E.3    Steinberg, I.Z.4
  • 6
    • 0025369229 scopus 로고
    • Conformational distributions of melittin in water/methanol mixtures from frequency-domain measurements of nonradiative energy transfer
    • Lakowicz, J. R., I. Gryczynski, W. Wiczk, G. Laczko, F. C. Prendergast, and M. L. Johnson. 1990. Conformational distributions of melittin in water/methanol mixtures from frequency-domain measurements of nonradiative energy transfer. Biophys. Chem. 36:99-115.
    • (1990) Biophys. Chem. , vol.36 , pp. 99-115
    • Lakowicz, J.R.1    Gryczynski, I.2    Wiczk, W.3    Laczko, G.4    Prendergast, F.C.5    Johnson, M.L.6
  • 7
    • 0027092983 scopus 로고
    • Fluorescence energy transfer analysis of calmodulinpeptide complexes
    • Chapman, E. R., K. Alexander, T. Vorherr, E. Carafoil, and D. R. Storm. 1992. Fluorescence energy transfer analysis of calmodulinpeptide complexes. Biochemistiy. 31:12819-12825.
    • (1992) Biochemistiy , vol.31 , pp. 12819-12825
    • Chapman, E.R.1    Alexander, K.2    Vorherr, T.3    Carafoil, E.4    Storm, D.R.5
  • 8
    • 0036669824 scopus 로고    scopus 로고
    • Measuring protein conformational changes by FRET/LRET
    • Heyduk, T. 2002. Measuring protein conformational changes by FRET/LRET. Curr. Opin. Biotechnol. 13:292-296.
    • (2002) Curr. Opin. Biotechnol. , vol.13 , pp. 292-296
    • Heyduk, T.1
  • 9
    • 0036909519 scopus 로고    scopus 로고
    • Imaging protein-protein interactions in living cells
    • Hink, M. A., T. Bisselin, and A. J. Visser. 2002. Imaging protein-protein interactions in living cells. Plant Mol. Biol. 50:871-883.
    • (2002) Plant Mol. Biol. , vol.50 , pp. 871-883
    • Hink, M.A.1    Bisselin, T.2    Visser, A.J.3
  • 10
    • 3042660199 scopus 로고    scopus 로고
    • Imaging protein-protein interactions in cell motility using fluorescence resonance energy transfer (FRET)
    • Parsons, M., B. Vojnovic, and S. Ameer-Beg. 2004. Imaging protein-protein interactions in cell motility using fluorescence resonance energy transfer (FRET). Biochem. Soc. Trans. 32:431-433.
    • (2004) Biochem. Soc. Trans. , vol.32 , pp. 431-433
    • Parsons, M.1    Vojnovic, B.2    Ameer-Beg, S.3
  • 11
    • 4544237524 scopus 로고    scopus 로고
    • Visualization of molecular activities inside living cells with fluorescent labels
    • Bunt, G., and F. S. Wouters. 2004. Visualization of molecular activities inside living cells with fluorescent labels. Int. Rev. Cytol. 237:205-277.
    • (2004) Int. Rev. Cytol. , vol.237 , pp. 205-277
    • Bunt, G.1    Wouters, F.S.2
  • 13
    • 0033823060 scopus 로고    scopus 로고
    • The renaissance of fluorescence resonance energy transfer
    • Selvin, P. R. 2000. The renaissance of fluorescence resonance energy transfer. Nat. Struct. Biol. 7:730-734.
    • (2000) Nat. Struct. Biol. , vol.7 , pp. 730-734
    • Selvin, P.R.1
  • 14
    • 0038101519 scopus 로고    scopus 로고
    • FRET or no FRET: A quantitative comparison
    • Berney, C., and G. Danuser. 2003. FRET or no FRET: a quantitative comparison. Biophys. J. 84:3992-4101.
    • (2003) Biophys. J. , vol.84 , pp. 3992-4101
    • Berney, C.1    Danuser, G.2
  • 15
    • 0034807927 scopus 로고    scopus 로고
    • Single-molecule fluorescence resonance energy transfer
    • Ha, T. 2001. Single-molecule fluorescence resonance energy transfer. Methods. 25:78-86.
    • (2001) Methods , vol.25 , pp. 78-86
    • Ha, T.1
  • 17
    • 0035366378 scopus 로고    scopus 로고
    • Single-molecule fluorescence methods for the study of nucleic acids
    • Ha, T. 2001. Single-molecule fluorescence methods for the study of nucleic acids. Curr. Opin. Struct. Biol. 11:287-292.
    • (2001) Curr. Opin. Struct. Biol. , vol.11 , pp. 287-292
    • Ha, T.1
  • 19
    • 14944362349 scopus 로고    scopus 로고
    • Single-molecule fluorescence spectroscopy: New probes of protein function and dynamics
    • Johnson, C. K., K. D. Osborn, M. W. Allen, and B. D. Slaughter. 2005. Single-molecule fluorescence spectroscopy: new probes of protein function and dynamics. Physiology. 20:10-14.
    • (2005) Physiology , vol.20 , pp. 10-14
    • Johnson, C.K.1    Osborn, K.D.2    Allen, M.W.3    Slaughter, B.D.4
  • 20
    • 0033616580 scopus 로고    scopus 로고
    • Single-pair fluorescence resonance energy transfer on freely diffusing molecules: Observation of Förster distance dependence and subpopulations
    • Deniz, A. A., M. Dahan, J. R. Grunwell, A. E. Faulhaber, T. Ha, D. S. Chemla, S. Weiss, and P. G. Schultz. 1999. Single-pair fluorescence resonance energy transfer on freely diffusing molecules: observation of Förster distance dependence and subpopulations. Proc. Natl. Acad. Sci. USA. 96:3670-3675.
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 3670-3675
    • Deniz, A.A.1    Dahan, M.2    Grunwell, J.R.3    Faulhaber, A.E.4    Ha, T.5    Chemla, D.S.6    Weiss, S.7    Schultz, P.G.8
  • 21
    • 0036180593 scopus 로고    scopus 로고
    • Fluorescence resonance energy transfer (FRET) and competing processes in donor-acceptor substituted DNA strands: A comparative study of ensemble and single-molecule data
    • Dietrich, A., V. Buschmann, C. Muller, and M. Sauer. 2002. Fluorescence resonance energy transfer (FRET) and competing processes in donor-acceptor substituted DNA strands: a comparative study of ensemble and single-molecule data. J. Biotechnol. 82:211-231.
    • (2002) J. Biotechnol. , vol.82 , pp. 211-231
    • Dietrich, A.1    Buschmann, V.2    Muller, C.3    Sauer, M.4
  • 22
    • 0001102751 scopus 로고
    • Fluorescence quenching and energy transfer in monomolecular films containing chlorophyll
    • Tweet, A. O., W. D. Bellamy, and G. L. Gains. 1964. Fluorescence quenching and energy transfer in monomolecular films containing chlorophyll. J. Chem. Phys. 41:2068-2077.
    • (1964) J. Chem. Phys. , vol.41 , pp. 2068-2077
    • Tweet, A.O.1    Bellamy, W.D.2    Gains, G.L.3
  • 23
    • 0018278640 scopus 로고
    • Surface density determination in membranes by fluorescence energy transfer
    • Fung, B. K. K., and L. Stryer. 1978. Surface density determination in membranes by fluorescence energy transfer. Biochemistry. 17:5241-5248.
    • (1978) Biochemistry , vol.17 , pp. 5241-5248
    • Fung, B.K.K.1    Stryer, L.2
  • 24
    • 0018802935 scopus 로고
    • Intramembrane positions of membrane bound-bound chromophores determined by excitation energy transfer
    • Koppel, D. E., P. J. Fleming, and P. Strittmatter. 1979. Intramembrane positions of membrane bound-bound chromophores determined by excitation energy transfer. Biochemistry. 24:5450-5457.
    • (1979) Biochemistry , vol.24 , pp. 5450-5457
    • Koppel, D.E.1    Fleming, P.J.2    Strittmatter, P.3
  • 25
    • 0018650688 scopus 로고
    • An analytic solution to the Förster energy transfer problem in two dimensions
    • Wolber, P. K., and B. S. Hudson. 1979. An analytic solution to the Förster energy transfer problem in two dimensions. Biophys. J. 28:197-210.
    • (1979) Biophys. J. , vol.28 , pp. 197-210
    • Wolber, P.K.1    Hudson, B.S.2
  • 26
    • 0019217744 scopus 로고
    • Calculation of fluorescence resonance energy transfer on surfaces
    • Dewey, T. G., and G. G. Hammes. 1980. Calculation of fluorescence resonance energy transfer on surfaces. Biophys. J. 32:1023-1036.
    • (1980) Biophys. J. , vol.32 , pp. 1023-1036
    • Dewey, T.G.1    Hammes, G.G.2
  • 27
    • 0020212826 scopus 로고
    • Fluorescence energy transfer in two dimensions, a numeric solution for random and nonrandom distributions
    • Snyder, B., and E. Freire. 1982. Fluorescence energy transfer in two dimensions, a numeric solution for random and nonrandom distributions. Biophys. J. 40:137-148.
    • (1982) Biophys. J. , vol.40 , pp. 137-148
    • Snyder, B.1    Freire, E.2
  • 28
    • 0028903255 scopus 로고
    • Calculation of resonance energy transfer in crowded biological membranes
    • Zimet, D. B., B. J. Thevenin, A. S. Verkman, S. B. Shohet, and J. R. Abney. 1995. Calculation of resonance energy transfer in crowded biological membranes. Biophys. J. 68:1592-1603.
    • (1995) Biophys. J. , vol.68 , pp. 1592-1603
    • Zimet, D.B.1    Thevenin, B.J.2    Verkman, A.S.3    Shohet, S.B.4    Abney, J.R.5
  • 29
    • 0038219114 scopus 로고    scopus 로고
    • Use of Monte Carlo method in the problem of energy migration in molecular complexes
    • D.L. Andrews and A.A. Demidov, editors. Wiley, New York
    • Demidov, A. A. 1999. Use of Monte Carlo method in the problem of energy migration in molecular complexes. In Resonance Energy Transfer. D.L. Andrews and A.A. Demidov, editors. Wiley, New York. 435-465.
    • (1999) Resonance Energy Transfer , pp. 435-465
    • Demidov, A.A.1
  • 30
    • 0037019478 scopus 로고    scopus 로고
    • Dynamic Monte Carlo simulations to model FRET and photobleaching in systems with multiple donor-acceptor interactions
    • Frederix, P., E. L. de Beer, W. Hamelink, and H. C. Gerritsen. 2002. Dynamic Monte Carlo simulations to model FRET and photobleaching in systems with multiple donor-acceptor interactions. J. Phys. Chem. B. 106:6793-6801.
    • (2002) J. Phys. Chem. B , vol.106 , pp. 6793-6801
    • Frederix, P.1    De Beer, E.L.2    Hamelink, W.3    Gerritsen, H.C.4
  • 32
    • 84981779372 scopus 로고
    • Intermolecular energy migration and fluorescence
    • Förster, T. 1948. Intermolecular energy migration and fluorescence. Ann. Phys. 2:55-75.
    • (1948) Ann. Phys. , vol.2 , pp. 55-75
    • Förster, T.1
  • 34
    • 0017795758 scopus 로고
    • Fluorescence energy transfer as a spectroscopic ruler
    • Stryer, L. 1978. Fluorescence energy transfer as a spectroscopic ruler. Annu. Rev. Biochem. 47:819-846.
    • (1978) Annu. Rev. Biochem. , vol.47 , pp. 819-846
    • Stryer, L.1
  • 35
    • 28444478453 scopus 로고    scopus 로고
    • Conformational changes involved in MscL channel gating measured using FRET spectroscopy
    • Corry, B., P. Rigby, Z. W. Liu, and B. Martinac. 2005. Conformational changes involved in MscL channel gating measured using FRET spectroscopy. Biophys. J. 89:L49-L51.
    • (2005) Biophys. J. , vol.89
    • Corry, B.1    Rigby, P.2    Liu, Z.W.3    Martinac, B.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.