tRNomics: A comparative analysis of Picrophilus torridus with other archaeal thermoacidophiles

Indian Journal of Biochemistry and Biophysics

Volumn 42, Issue 4, 2005, Pages 238-242

  Mallick, Bibekanand ^a   Chakrabarti, Jayprokas ^a,b   Das, Smarajit ^a   Ghosh, Zhumur ^a  

^a DEPARTMENT OF MATERIALS SCIENCE   (India)

^b Biogyan   (India)

Author keywords

Archaea; Base pairs; Intron; Overlapping tRNA; Picrophilus torridus; Thermoacidophile; tRNomics

Indexed keywords

ARCHAEAL DNA; ARCHAEAL RNA; TRANSFER RNA;

ARTICLE; BASE PAIRING; CLASSIFICATION; COMPARATIVE STUDY; GENETICS; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; SPECIES DIFFERENCE; TEMPERATURE; THERMOCOCCUS; THERMOPLASMATALES;

BASE PAIRING; BASE SEQUENCE; DNA, ARCHAEAL; MOLECULAR SEQUENCE DATA; RNA, ARCHAEAL; RNA, TRANSFER; SPECIES SPECIFICITY; TEMPERATURE; THERMOCOCCUS; THERMOPLASMALES;

ARCHAEA; PICROPHILUS TORRIDUS; PICROPHILUS TORRIDUS DSM 9790; SULFOLOBUS SOLFATARICUS; THERMOPLASMA ACIDOPHILUM;

EID: 28244488519     PISSN: 03011208     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (15)

1. Mallick B, Chakrabarti J, Sahoo S, Ghosh Z & Das S (2005) DNA Res (in press)
2. Wich G, Leinfelder W & Böck A (1987) EMBO J 6, 523-528
3. Marck C & Grosjean H (2002) RNA 8, 1189-1232
4. Lowe T & Eddy S R (1997) Nucleic Acids Res 25, 955-964
5. Laslett D & Canback B (2004) Nucleic Acids Res 32, 11-16
6. Futterer O, Angelov A, Liesegang H et al. (2004) Proc Natl Acad Sci (USA) 101, 9091-9096
7. Chakrabarti J, Sahoo S, Mallick B, Das S & Ghosh Z (2005) Indian J Phys (In press)
8. Reichert A, Rothbauer U & Mörl M (1998) J Biol Chem 278, 31977-31984
9. Ruepp A, Graml W, Santos-Martinez, M L, Koretke K, Volker C, Mewes H, Frishman D, Stocker S, Lupas A & Baumeister W (2000) Nature 407, 508-513
10. Kawashima T, Amano N, Koike H, Makino S, Higuchi S, Kawashima-Ohya Y, Watanabe K, Yamazaki M, Kanehori K, Kawamotoi T, Nunoshiba T, Yamamoto Y, Aramaki H, Makino K & Suzuki M (2000) Proc Natl Acad Sci (USA) 97, 14257-14262
11. She Q, Singh R K, Confalonieri F, Zivanovic Y, Allard G, Awayez M J, Chan-Weiher C C Y, Clausen I G, Bruce A, Curtis B A, Moors A, Erauso G, Fletcher C, Gordon P M K, Jong I H, Jeffries A, Kozera C, Medina N, Peng X, Thi-Ngoc H P, Redder P, Schenk M, Theriault C, Tolstrup N, Charlebois R L, Doolittle W F, Duguet M, Gaasterland T, Garrett R A, Ragan M A, Sensen C W & Oost J V (2001) Proc Natl Acad Sci (USA) 98, 7835-7840
12. Kawarabayasi Y, Hino Y, Horikawa H, Jin-no- K, Takahashi M, Sekine M, Baba S, Ankai A, Kosugi H, Hosoyama A, Fukui S, Nagai Y, Nishijima K, Otsuka R, Nakazawa H, Takamiya M, Kato Y, Yoshizawa T, Tanaka T, Kudoh Y, Yamazaki J, Kushida N, Oguchi A, Aoki K, Musuda S, Yanagii M, Nishimura M, Yamagishi A, Oshima T & Kikuchi H (2001) DNA Res 8, 123-140
13. Gohl H P, Grondahl B & Thomm M (1995) Nucleic Acids Res 23, 3837-3841
14. Chattopadhyay S, Chakrabarti J, Bandyopadhyay & Som A (2001) Indian J Biochem Biophys 38, 124-127
15. Auffinger P & Westhof E (2001) RNA 7, 334-341