-
1
-
-
0030640902
-
TOP genes: A translationally controlled class of genes including those coding for ribosomal proteins
-
F. Amaldi, and P. Pierandrei-Amaldi TOP genes: a translationally controlled class of genes including those coding for ribosomal proteins Prog. Mol. Subcell. Biol. 18 1997 1 17
-
(1997)
Prog. Mol. Subcell. Biol.
, vol.18
, pp. 1-17
-
-
Amaldi, F.1
Pierandrei-Amaldi, P.2
-
3
-
-
0031922811
-
Human U19 intron-encoded snoRNA is processed from a long primary transcript that possesses little potential for protein coding
-
M.L. Bortolin, and T. Kiss Human U19 intron-encoded snoRNA is processed from a long primary transcript that possesses little potential for protein coding RNA 4 1998 445 454
-
(1998)
RNA
, vol.4
, pp. 445-454
-
-
Bortolin, M.L.1
Kiss, T.2
-
5
-
-
1842684068
-
Genome sequence of the Brown Norway rat yields insights into mammalian evolution
-
R.A. Gibbs Genome sequence of the Brown Norway rat yields insights into mammalian evolution Nature 428 2004 493 521
-
(2004)
Nature
, vol.428
, pp. 493-521
-
-
Gibbs, R.A.1
-
6
-
-
0037067230
-
U87 RNA, a novel C/D box small nucleolar RNA from mammalian cells
-
I.K. Gogolevskaya, J.A. Makarova, L.N. Gause, V.A. Kulichkova, I.M. Konstantinova, and D.A. Kramerov U87 RNA, a novel C/D box small nucleolar RNA from mammalian cells Gene 292 2002 199 204
-
(2002)
Gene
, vol.292
, pp. 199-204
-
-
Gogolevskaya, I.K.1
Makarova, J.A.2
Gause, L.N.3
Kulichkova, V.A.4
Konstantinova, I.M.5
Kramerov, D.A.6
-
7
-
-
0026605537
-
CLUSTAL V: Improved software for multiple sequence alignment
-
D.G. Higgins, A.J. Bleasby, and R. Fuchs CLUSTAL V: improved software for multiple sequence alignment Comput. Appl. Biosci. 8 1992 189 191
-
(1992)
Comput. Appl. Biosci.
, vol.8
, pp. 189-191
-
-
Higgins, D.G.1
Bleasby, A.J.2
Fuchs, R.3
-
8
-
-
0035355205
-
RNomics: An experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse
-
A. Huttenhofer RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse EMBO J. 20 2001 2943 2953
-
(2001)
EMBO J.
, vol.20
, pp. 2943-2953
-
-
Huttenhofer, A.1
-
9
-
-
0030010752
-
Effects of nonsense mutations on nuclear and cytoplasmic adenine phosphoribosyltransferase RNA
-
O. Kessler, and L.A. Chasin Effects of nonsense mutations on nuclear and cytoplasmic adenine phosphoribosyltransferase RNA Mol. Cell. Biol. 16 1996 4426 4435
-
(1996)
Mol. Cell. Biol.
, vol.16
, pp. 4426-4435
-
-
Kessler, O.1
Chasin, L.A.2
-
10
-
-
0141596080
-
The dog genome: Survey sequencing and comparative analysis
-
E.F. Kirkness The dog genome: survey sequencing and comparative analysis Science 301 2003 1898 1903
-
(2003)
Science
, vol.301
, pp. 1898-1903
-
-
Kirkness, E.F.1
-
11
-
-
0022552131
-
Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes
-
M. Kozak Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes Cell 44 1986 283 292
-
(1986)
Cell
, vol.44
, pp. 283-292
-
-
Kozak, M.1
-
12
-
-
0023425901
-
Effects of intercistronic length on the efficiency of reinitiation by eucaryotic ribosomes
-
M. Kozak Effects of intercistronic length on the efficiency of reinitiation by eucaryotic ribosomes Mol. Cell. Biol. 7 1987 3438 3445
-
(1987)
Mol. Cell. Biol.
, vol.7
, pp. 3438-3445
-
-
Kozak, M.1
-
13
-
-
0035945260
-
Constraints on reinitiation of translation in mammals
-
M. Kozak Constraints on reinitiation of translation in mammals Nucleic Acids Res. 29 2001 5226 5232
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 5226-5232
-
-
Kozak, M.1
-
14
-
-
0042968976
-
The power of the 3′ UTR: Translational control and development
-
S. Kuersten, and E.B. Goodwin The power of the 3′ UTR: translational control and development Nat. Rev., Genet. 4 2003 626 637
-
(2003)
Nat. Rev., Genet.
, vol.4
, pp. 626-637
-
-
Kuersten, S.1
Goodwin, E.B.2
-
15
-
-
0037197803
-
Identification of tissue-specific microRNAs from mouse
-
M. Lagos-Quintana, R. Rauhut, A. Yalcin, J. Meyer, W. Lendeckel, and T. Tuschl Identification of tissue-specific microRNAs from mouse Curr. Biol. 12 2002 735 739
-
(2002)
Curr. Biol.
, vol.12
, pp. 735-739
-
-
Lagos-Quintana, M.1
Rauhut, R.2
Yalcin, A.3
Meyer, J.4
Lendeckel, W.5
Tuschl, T.6
-
16
-
-
0020352430
-
Expression of vaccinia virus early mRNA in Ehrlich ascites tumor cells: 2. Part of the polysomes at an early stage of virus infection are not bound to the cytoskeleton
-
R. Lemieux, and G. Beaud Expression of vaccinia virus early mRNA in Ehrlich ascites tumor cells: 2. Part of the polysomes at an early stage of virus infection are not bound to the cytoskeleton Eur. J. Biochem. 129 1982 273 279
-
(1982)
Eur. J. Biochem.
, vol.129
, pp. 273-279
-
-
Lemieux, R.1
Beaud, G.2
-
17
-
-
0036613754
-
Clustering of housekeeping genes provides a unified model of gene order in the human genome
-
M.J. Lercher, A.O. Urrutia, and L.D. Hurst Clustering of housekeeping genes provides a unified model of gene order in the human genome Nat. Genet. 31 2002 180 183
-
(2002)
Nat. Genet.
, vol.31
, pp. 180-183
-
-
Lercher, M.J.1
Urrutia, A.O.2
Hurst, L.D.3
-
18
-
-
0032540217
-
Inhibition of CCAAT/enhancer-binding protein alpha and beta translation by upstream open reading frames
-
A.J. Lincoln, Y. Monczak, S.C. Williams, and P.F. Johnson Inhibition of CCAAT/enhancer-binding protein alpha and beta translation by upstream open reading frames J. Biol. Chem. 273 1998 9552 9560
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 9552-9560
-
-
Lincoln, A.J.1
Monczak, Y.2
Williams, S.C.3
Johnson, P.F.4
-
19
-
-
0029056689
-
Efficiency of reinitiation of translation on human immunodeficiency virus type 1 mRNAs is determined by the length of the upstream open reading frame and by intercistronic distance
-
B.G. Luukkonen, W. Tan, and S. Schwartz Efficiency of reinitiation of translation on human immunodeficiency virus type 1 mRNAs is determined by the length of the upstream open reading frame and by intercistronic distance J. Virol. 69 1995 4086 4094
-
(1995)
J. Virol.
, vol.69
, pp. 4086-4094
-
-
Luukkonen, B.G.1
Tan, W.2
Schwartz, S.3
-
20
-
-
0742323558
-
Nonsense-mediated mRNA decay: Splicing, translation and mRNP dynamics
-
L.E. Maquat Nonsense-mediated mRNA decay: splicing, translation and mRNP dynamics Nat. Rev., Mol. Cell Biol. 5 2004 89 99
-
(2004)
Nat. Rev., Mol. Cell Biol.
, vol.5
, pp. 89-99
-
-
Maquat, L.E.1
-
22
-
-
0036797563
-
Control of eukaryotic protein synthesis by upstream open reading frames in the 5′-untranslated region of an mRNA
-
H.A. Meijer, and A.A. Thomas Control of eukaryotic protein synthesis by upstream open reading frames in the 5′-untranslated region of an mRNA Biochem. J. 367 2002 1 11
-
(2002)
Biochem. J.
, vol.367
, pp. 1-11
-
-
Meijer, H.A.1
Thomas, A.A.2
-
23
-
-
0034459468
-
Upstream open reading frames as regulators of mRNA translation
-
D.R. Morris, and A.P. Geballe Upstream open reading frames as regulators of mRNA translation Mol. Cell. Biol. 20 2000 8635 8642
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 8635-8642
-
-
Morris, D.R.1
Geballe, A.P.2
-
25
-
-
0031878107
-
The host gene for intronic U17 small nucleolar RNAs in mammals has no protein-coding potential and is a member of the 5′-terminal oligopyrimidine gene family
-
P. Pelczar, and W. Filipowicz The host gene for intronic U17 small nucleolar RNAs in mammals has no protein-coding potential and is a member of the 5′-terminal oligopyrimidine gene family Mol. Cell. Biol. 18 1998 4509 4518
-
(1998)
Mol. Cell. Biol.
, vol.18
, pp. 4509-4518
-
-
Pelczar, P.1
Filipowicz, W.2
-
26
-
-
0035577382
-
A reassessment of the translation initiation codon in vertebrates
-
S. Peri, and A. Pandey A reassessment of the translation initiation codon in vertebrates Trends Genet. 17 2001 685 687
-
(2001)
Trends Genet.
, vol.17
, pp. 685-687
-
-
Peri, S.1
Pandey, A.2
-
27
-
-
0036087522
-
UTRdb and UTRsite: Specialized databases of sequences and functional elements of 5′ and 3′ untranslated regions of eukaryotic mRNAs. Update 2002
-
G. Pesole UTRdb and UTRsite: specialized databases of sequences and functional elements of 5′ and 3′ untranslated regions of eukaryotic mRNAs. Update 2002 Nucleic Acids Res. 30 2002 335 340
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 335-340
-
-
Pesole, G.1
-
28
-
-
0025866553
-
Experimental changes in the amount of maternally stored ribosomes affect the translation efficiency of ribosomal protein mRNA in Xenopus embryo
-
P. Pierandrei-Amaldi, N. Campioni, and B. Cardinali Experimental changes in the amount of maternally stored ribosomes affect the translation efficiency of ribosomal protein mRNA in Xenopus embryo Cell. Mol. Biol. 37 1991 227 238
-
(1991)
Cell. Mol. Biol.
, vol.37
, pp. 227-238
-
-
Pierandrei-Amaldi, P.1
Campioni, N.2
Cardinali, B.3
-
29
-
-
0021111230
-
Mouse ubiquitous B2 repeat in polysomal and cytoplasmic poly(A) + RNAs: Uniderectional orientation and 3′-end localization
-
A.P. Ryskov, P.L. Ivanov, D.A. Kramerov, and G.P. Georgiev Mouse ubiquitous B2 repeat in polysomal and cytoplasmic poly(A) + RNAs: uniderectional orientation and 3′-end localization Nucleic Acids Res. 11 1983 6541 6558
-
(1983)
Nucleic Acids Res.
, vol.11
, pp. 6541-6558
-
-
Ryskov, A.P.1
Ivanov, P.L.2
Kramerov, D.A.3
Georgiev, G.P.4
-
30
-
-
0025112855
-
Glyceraldehyde-3-phosphate dehydrogenase mRNA is a major interleukin 2-induced transcript in a cloned T-helper lymphocyte
-
D.E. Sabath, H.E. Broome, and M.B. Prystowsky Glyceraldehyde-3-phosphate dehydrogenase mRNA is a major interleukin 2-induced transcript in a cloned T-helper lymphocyte Gene 91 1990 185 191
-
(1990)
Gene
, vol.91
, pp. 185-191
-
-
Sabath, D.E.1
Broome, H.E.2
Prystowsky, M.B.3
-
31
-
-
0043269205
-
The RNA polymerase II core promoter
-
S.T. Smale, and J.T. Kadonaga The RNA polymerase II core promoter Ann. Rev. Biochem. 72 2003 449 479
-
(2003)
Ann. Rev. Biochem.
, vol.72
, pp. 449-479
-
-
Smale, S.T.1
Kadonaga, J.T.2
-
32
-
-
0031756336
-
Classification of gas5 as a multi-small-nucleolar-RNA (snoRNA) host gene and a member of the 5′-terminal oligopyrimidine gene family reveals common features of snoRNA host genes
-
C.M. Smith, and J.A. Steitz Classification of gas5 as a multi-small-nucleolar-RNA (snoRNA) host gene and a member of the 5′-terminal oligopyrimidine gene family reveals common features of snoRNA host genes Mol. Cell. Biol. 18 1998 6897 6909
-
(1998)
Mol. Cell. Biol.
, vol.18
, pp. 6897-6909
-
-
Smith, C.M.1
Steitz, J.A.2
-
33
-
-
28044455848
-
Initiation of translation
-
Kluwer Academic Pub.
-
A.S. Spirin Initiation of translation Ribosomes 1999 Kluwer Academic Pub. 237
-
(1999)
Ribosomes
, pp. 237
-
-
Spirin, A.S.1
-
34
-
-
0037133565
-
Comprehensive analysis of CpG islands in human chromosomes 21 and 22
-
D. Takai, and P.A. Jones Comprehensive analysis of CpG islands in human chromosomes 21 and 22 Proc. Natl. Acad. Sci. U. S. A. 99 2002 3740 3745
-
(2002)
Proc. Natl. Acad. Sci. U. S. A.
, vol.99
, pp. 3740-3745
-
-
Takai, D.1
Jones, P.A.2
-
35
-
-
0034055532
-
Intronic U50 small-nucleolar-RNA (snoRNA) host gene of no protein-coding potential is mapped at the chromosome breakpoint t(3;6)(q27;q15) of human B-cell lymphoma
-
R. Tanaka Intronic U50 small-nucleolar-RNA (snoRNA) host gene of no protein-coding potential is mapped at the chromosome breakpoint t(3;6)(q27;q15) of human B-cell lymphoma Genes Cells 5 2000 277 287
-
(2000)
Genes Cells
, vol.5
, pp. 277-287
-
-
Tanaka, R.1
-
36
-
-
0030033546
-
A mammalian gene with introns instead of exons generating stable RNA products
-
K.T. Tycowski, M.D. Shu, and J.A. Steitz A mammalian gene with introns instead of exons generating stable RNA products Nature 379 1996 464 466
-
(1996)
Nature
, vol.379
, pp. 464-466
-
-
Tycowski, K.T.1
Shu, M.D.2
Steitz, J.A.3
-
37
-
-
0019888554
-
The role of mRNA competition in regulating translation: I. Demonstration of competition in vivo
-
W.E. Walden, T. Godefroy-Colburn, and R.E. Thach The role of mRNA competition in regulating translation: I. Demonstration of competition in vivo J. Biol. Chem. 256 1981 11739 11746
-
(1981)
J. Biol. Chem.
, vol.256
, pp. 11739-11746
-
-
Walden, W.E.1
Godefroy-Colburn, T.2
Thach, R.E.3
-
38
-
-
2542589355
-
5′-untranslated regions with multiple upstream AUG codons can support low-level translation via leaky scanning and reinitiation
-
X.Q. Wang, and J.A. Rothnagel 5′-untranslated regions with multiple upstream AUG codons can support low-level translation via leaky scanning and reinitiation Nucleic Acids Res. 32 2004 1382 1391
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 1382-1391
-
-
Wang, X.Q.1
Rothnagel, J.A.2
-
39
-
-
0242669945
-
Regulation of mRNA translation by 5′- and 3′-UTR-binding factors
-
G.S. Wilkie, K.S. Dickson, and N.K. Gray Regulation of mRNA translation by 5′- and 3′-UTR-binding factors Trends Biochem. Sci. 28 2003 182 188
-
(2003)
Trends Biochem. Sci.
, vol.28
, pp. 182-188
-
-
Wilkie, G.S.1
Dickson, K.S.2
Gray, N.K.3
-
40
-
-
15244358503
-
Systematic discovery of regulatory motifs in human promoters and 3′ UTRs by comparison of several mammals
-
X. Xie Systematic discovery of regulatory motifs in human promoters and 3′ UTRs by comparison of several mammals Nature 434 2005 338 345
-
(2005)
Nature
, vol.434
, pp. 338-345
-
-
Xie, X.1
-
41
-
-
0031046735
-
Evidence that translation reinitiation abrogates nonsense-mediated mRNA decay in mammalian cells
-
J. Zhang, and L.E. Maquat Evidence that translation reinitiation abrogates nonsense-mediated mRNA decay in mammalian cells EMBO J. 16 1997 826 833
-
(1997)
EMBO J.
, vol.16
, pp. 826-833
-
-
Zhang, J.1
Maquat, L.E.2
-
42
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
M. Zuker Mfold web server for nucleic acid folding and hybridization prediction Nucleic Acids Res. 31 2003 3406 3415
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3406-3415
-
-
Zuker, M.1
|