Characteristics of transxylosylation by β-xylosidase from Aspergillus awamori K4

Biochimica et Biophysica Acta - General Subjects

Volumn 1726, Issue 3, 2005, Pages 272-279

  Kurakake, Masahiro ^a   Fujii, Tomiko ^a   Yata, Masahiro ^a   Okazaki, Takumi ^a   Komaki, Toshiaki ^a  

^a FUKUYAMA UNIVERSITY   (Japan)

Author keywords

xylosidase; Aspergillus; Glucosidase; Transglycosylation; Xylooligosaccharide

Indexed keywords

ALCOHOL; DISACCHARIDE; GLUCOSIDASE; PHENOL DERIVATIVE; SUGAR ALCOHOL; XYLAN 1,4 BETA XYLOSIDASE; XYLOSE;

AMINO ACID SEQUENCE; ARTICLE; ASPERGILLUS AWAMORI; ASPERGILLUS NIGER; CHEMICAL MODIFICATION; CHEMICAL REACTION; ENZYME MECHANISM; ENZYME SPECIFICITY; ENZYME SUBSTRATE; GENE SEQUENCE; HYDROLYSIS; MOLECULAR WEIGHT; NONHUMAN; OPEN READING FRAME; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY;

ASPERGILLUS; BASE SEQUENCE; CARBOHYDRATE SEQUENCE; GLYCOSYLATION; MOLECULAR SEQUENCE DATA; SUBSTRATE SPECIFICITY; XYLOSIDASES;

ASPERGILLUS; ASPERGILLUS AWAMORI; ASPERGILLUS NIGER;

EID: 27944494366     PISSN: 03044165     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbagen.2005.08.009     Document Type: Article

References (30)

1. N.A. Rodionova, I.M. Tavobilov, and A.M. Bezborodov β-Xylosidase from Aspergillus niger 15: purification and properties J. Appl. Biochem. 5 1983 300 312
2. B. Henrissat, and A. Bairoch New families in the classification of glycosyl hydrolases based on amino acid sequence similarities Biochem. J. 193 1993 781 788
3. B. Henrissat, and A. Bairoch Updating the sequence-based classification of glycosyl hydrolases Biochem. J. 316 1996 695 696
4. B. Henrissat, and G. Davies Structural and sequence-based classification of glycoside hydrolases Curr. Opin. Struct. Biol. 7 1997 637 644
5. D.E. Koshland Stereochemistry and the mechanism of enzymic reactions Biol. Rev. 28 1953 416 436
6. G. Legler Mechanistic information from studies with reversible and irreversible inhibitors Adv. Carbohydr. Chem. Biochem. 48 1990 319 384
7. M.L. Sinnott Catalytic mechanism of enzymic glycosyl transfer Chem. Rev. 90 1990 1171 1202
8. T. Bravman, V. Belakhov, D. Solomon, G. Shoham, Y. Shoham, B. Henrissat, T. Baasov, and Y. Shoham Identification of the catalytic residues in family 52 glycoside hydrolase, a β-xylosidase from Geobacillus stearothermophilus T-6 J. Biol. Chem. 278 2003 26742 26749
9. D.J. Vocadlo, L.F. Mackebzie, S. He, G.J. Zeikus, and S.G. Withers Identification of Glu-277 as the catalytic nucleophile of Thermoanaerobacterium saccharolyticum β-xylosidase using electrospray MS Biochem. J. 335 1998 449 455
10. D.J. Vocadlo, W.K. Rupitz, and S.G. Withers A case for reverse protonation: identification of Glu 160 as an Acid/Base catalyst in Thermoanaerobacterium saccharolyticum β-xylosidase and detailed kinetic analysis of a site-directed mutant Biochemistry 41 2002 9736 9746
11. L.D.C. Grange, I.S. Pretorius, and W.H. Zyl Co-expression of the Trichoderma reesei beta-xylanase (XYN2) and the Aspergillus niger beta-xylosidase (XLND) in the yeast Saccharomyces cerevisiae Appl. Microbiol. Biotechnol. 54 2000 195 200
12. N. Kitamoto, S. Yoshino, K. Ohmiya, and N. Tsukagoshi Sequence analysis, overexpression, and antisense inhibition of a beta-xylosidase gene, xylA, from Aspergillus oryzae KBN616 Appl. Environ. Microbiol. 65 1999 20 24
13. C.E. Margolles, M. Tenkanen, S.T. Nakari, and M. Penttila Cloning of genes encoding alpha-l-arabinofuranosidase and beta-xylosidase from Trichoderma reesei by expression in Saccharomyces cerevisiae Appl. Environ. Microbiol. 62 1996 3840 3846
14. N.N.M.E. Peij, J. Brinkmann, M. Vrsanska, J. Visser, and L.H. Graaff beta-Xylosidase activity, encoded by xlnD, is essential for complete hydrolysis of xylan by Aspergillus niger, but not for induction of the xylanolytic enzyme spectrum Eur. J. Biochem. 245 1997 164 173
15. G.J.A. Preze, N.N.M.E. Peij, A. Bezoen, A.P. MacCabe, D. Ramon, and L.H. Graaf Molecular cloning and transcriptional regulation of the Aspergillus nidulans xlnD gene encoding a β-Xylosidase Appl. Environ. Microbiol. 64 1998 1412 1419
16. M. Win, Y. Kamiyama, M. Matsuo, and T. Yasui Transxylosylation products of xylobiose by β-xylosidase-1 from Penicillum wortmanni IFO 7237 Agric. Biol. Chem. 52 1988 1151 1158
17. E.V. Eneyskaya, H. Brumer III, L.V. Backinowsky, D.R. Ivanen, A.A. Kulminskaya, K.A. Shabalin, and K.N. Neustroev Enzymatic synthesis of β-xylanase substrate: transglycosylation reaction of the β-xylosidase from Aspergillus sp Carbohydr. Res. 338 2003 313 325
18. P. Drouet, M. Zhang, and M.D. Legoy Enzymatic synthesis of alkyl β-d-xylosides by transxylosylation and reverse hydrolysis Biotechnol. Bioeng. 43 1994 1075 1086
19. H. Shinoyama, Y. Kamiyama, and T. Yasui Enzymatic synthesis of alkyl β-xylosides from xylobiose by application of the transxylosyl reaction of Aspergillus niger β-xylosidase Agric. Biol. Chem. 52 1988 2197 2202
20. J. Sulistyo, Y. Kamuyama, H. Ito, and T. Yasui Enzymatic synthesis of hydroquinone β-xyloside from xylooligosaccharides Biosci. Biotech. Biochem. 58 1994 1311 1313
21. M. Kurakake, S. Osada, and T. Komaki Transxylosylation of β-xylosidase from Aspergillus awamori K4 Biosci. Biotech. Biochem. 61 1997 2010 2014
22. J. Sambrook, E.F. Fritsch, and T. Maniatis Molecular Cloning: A Laboratory Manual 2nd ed. 1989 Cold Spring Harbor Laboratory Cold Spring Harbor, NY
23. B. Henrissat A classification of glycosyl hydrolases based on amino acid sequence similarities Biochem. J. 280 1991 309 316
24. G. Heijne A new method for predicting signal sequence cleavage sites Nucleic Acids Res. 14 1986 4683 4690
25. B. Cubero, and C. Scazzocchio Two different, adjacent and divergent zinc finger binding sites are necessary for CREA-mediated carbon catabolite repression in the proline gene cluster of Aspergillus nidulans EMBO J. 13 1994 407 415
26. N.N.M.E. Peij, J. Visser, and L.H. Graaff Isolation and analysis of xlnR, encoding a transcriptional activator coordinating xylanolytic expression in Aspergillus niger Mol. Microbiol. 27 1998 131 142
27. S. Dan, I. Marton, M. Dekel, B.A. Bravdo, S. He, S.G. Withers, and O. Shoseyov Cloning, expression, characterization, and nucleophile identification of family 3, Aspergillus niger β-glucosidase J. Biol. Chem. 275 2000 4973 4980
28. Y.K. Li, J. Chir, and F.Y. Chen Catalytic mechanism of a family 3 β-glucosidase and mutagenesis study on residue Asp-247 Biochem. J. 355 2001 835 840
29. Y.K. Li, J. Chir, S. Tanaka, and F.Y. Chen Identification of the general acid/base catalyst of a family 3 β-glucosidase from Flavobacterium meningosepticum Biochemistry 41 2002 2751 2759
30. D.K. Watt, H. Ono, and K. Hayashi Agrobacterium tumefaciens β-glucosidase is also an effective β-xylosidase, and has a high transglycosylation activity in the presence of alcohol Biochim. Biophys. Acta 1385 1998 78 88