Cloning of genes encoding α-L-arabinofuranosidase and β-xylosidase from Trichoderma reesei by expression in Saccharomyces cerevisiae

Applied and Environmental Microbiology

Volumn 62, Issue 10, 1996, Pages 3840-3846

  Margolles Clark, Emilio ^a   Tenkanen, Maija ^a   Nakari Setälä, Tiina ^a   Penttilä, Merja ^a  

^a VTT TECHNICAL RESEARCH CENTRE OF FINLAND   (Finland)

Author keywords

[No Author keywords available]

Indexed keywords

4 NITROPHENOL; ALPHA ARABINOFURANOSIDASE; PYRANOSIDE; XYLAN; XYLAN 1,4 BETA XYLOSIDASE; XYLOSE;

AMINO ACID SEQUENCE; ARTICLE; ASPERGILLUS NIGER; CONTROLLED STUDY; ENZYME ACTIVITY; ENZYME SYNTHESIS; FUNGAL GENETICS; GENE EXPRESSION; HYDROLYSIS; MOLECULAR CLONING; NONHUMAN; SACCHAROMYCES CEREVISIAE; TRICHODERMA REESEI;

ASPERGILLUS NIGER; HYPOCREA JECORINA; SACCHAROMYCES CEREVISIAE; TRICHODERMA;

EID: 0029739169     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/aem.62.10.3840-3846.1996     Document Type: Article

References (43)

1. Aspinall, G. O. 1980. Chemistry of cell wall polysaccharides, p. 473-500. In J. Preiss (ed.), The biochemistry of plants, vol. 3. Academic Press, New York.
2. Barnett, C. C., R. M. Berka, and T. Fowler. 1991. Cloning and amplification of the gene encoding an extracellular beta-glucosidase from Trichoderma reesei: evidence for improved rates of saccharification of cellulosic substrates. Bio/Technology 9:562-567.
3. Bause, E., and G. Legler. 1980. Isolation and structure of a tryptic glycopeptide from the active site of beta-glucosidase A3 from Aspergillus wendtii. Biochim. Biophys. Acta 626:459-465.
4. Becker, D. M., and L. Guarente. 1991. High-efficiency transformation of yeast by electroporation. Methods Enzymol. 194:182-187.
5. Brice, R. E., and J. M. Morrison. 1982. The degradation of isolated hemicelluloses and lignin-hemicellulose complexes by cell-free rumen hemicellulases. Carbohydr. Res. 101:93-100.
6. Castle, L. A., K. D. Smith, and R. O. Morris. 1992. Cloning and sequencing of an Agrobacterium tumefaciens β-glucosidase gene involved in modifying a vir-inducing plant signal molecule. J. Bacteriol. 174:1478-1486.
7. Dalbøge, H., and H. P. Heldt-Hansen. 1994. A novel method for efficient expression cloning of fungal enzymes genes. Mol. Gen. Genet. 243:253-260.
8. Dear, S., and R. Staden. 1991. A sequence assembly and editing program for efficient management of large projects. Nucleic Acids Res. 19:3907-3911.
9. Flipphi, M. J., H. Panneman, P. van der Veen, J. Visser, and L. H. de Graaff. 1993. Molecular cloning, expression and structure of the endo-1,5-α-L-arabinase gene of Aspergillus niger. Appl. Microbiol. Biotechnol. 40:318-326.
10. Flipphi, M. J., M. van Heuvel, P. van der Veen, J. Visser, and L. H. de Graaff. 1993. Cloning and characterization of the abfB gene coding for the major α-L-arabinofuranosidase (ABF B) of Aspergillus niger. Curr. Genet. 24:525-532.
11. Flipphi, M. J., J. Visser, P. van der Veen, and L. H. de Graaff. 1994. Arabinase gene expression in Aspergillus niger: indications for coordinated regulation. Microbiology 140:2673-2682.
12. Gasparic, A., R. Marinsek-Logar, J. Martin, R. J. Wallace, F. V. Nekrep, and H. J. Flint. 1995. Isolation of genes encoding β-D-xylanase, β-D-xylosidase and α-L-arabinofuranosidase activities from the rumen bacterium Prevotella ruminicola Bl(4). FEMS Microbiol. Lett. 125:135-141.
13. Grabnitz, F., K. P. Rucknagel, M. Seiss, and W. L. Staudenbauer. 1989. Nucleotide sequence of the Clostridium thermocellum bglB gene encoding thermostable β-glucosidase B: homology to fungal β-glucosidases. Mol. Gen. Genet. 217:70-76.
14. Greve, L. C., J. M. Labavitch, and R. E. Hungate. 1984. α-L-Arabinofuranosidase from Ruminococcus albus 8: purification and possible role in hydrolysis of alfalfa cell wall. Appl. Environ. Microbiol. 47:1135-1140.
15. Hausalo, T. 1995. Analysis of wood and pulp carbohydrates by anion exchange chromatography with pulse amperometric detection, p. 6-12. In the 8th International Symposium on Wood and Pulping Chemistry, Helsinki, Finland.
16. Henrissat, B., and A. Bairoch. 1993. New families in the classification of glycosyl hydrolases based on amino acid sequence similarities. Biochem. J. 293:781-788.
17. Herrmann, M., M. Vrsanska, M. Jurickova, J. Hirsch, P. Biely, and C. P. Kubicek. 1995. Characterization of an exo-β-xylanase from Trichoderma reesei, p. 233. In Sixth International Conference on Biotechnology in the Pulp and Paper Industry, Vienna, Austria.
18. Kaji, A. 1984. L-Arabinases. Adv. Carbohydr. Chem. Biochem. 42:383-394.
19. Kellett, L. E., D. M. Poole, L. M. Ferreira, A. J. Durrant, G. P. Hazlewood, and H. J. Gilbert. 1990. Xylanase B and an arabinofuranosidase from Pseudomonas fluorescens subsp. cellulosa contain identical cellulose-binding domains and are encoded by adjacent genes. Biochem. J. 272:369-376.
20. Kohchi, C., and A. Toh-e. 1985. Nucleotidc sequence of Candida pelliculosa β-glucosidase gene. Nucleic Acids Res. 13:6273-6282.
21. Komae, K., A. Kaji, and M. Sato. 1982. An α-L-arabinofuranosidase from Streptomyces purpurascens IFO 3389. Agric. Biol. Chem. 46:1899-1905.
22. Kormelink, F. J. M., M. F. Searle-van Leeuwen, T. M. Wood, and A. G. J. Voragen. 1991. Purification and characterization of a (1,4)-β-D-arabinoxylan arabinofuranohydrolase from Aspergillus awamori. Appl. Microbiol. Biotechnol. 35:753-758.
23. Machida, M., I. Ohtsuki, S. Fukui, and I. Yamashita. 1988. Nucleotide sequences of Saccharomycopsis fibuligera genes for extracellular β-glucosidases as expressed in Saccharomyces cerevisiae. Appl. Environ. Microbiol. 54:3147-3155.
24. Manin, C., F. Shareek, R. Morosoli, and D. Kluepfel. 1994. Purification and characterization of an α-L-arabinofuranosidase from Streptomyces lividans 66 and DNA sequence of the gene (abfA). Biochem. J. 302:443-449.
25. Margolles-Clark, E., M. Tenkanen, E. Luonteri, and M. Penttilä. Eur. J. Biochem., in press.
26. Penttilä, M., E. L. André, P. Lehtovaara, M. Bailey, T. T. Teeri, and J. K. C. Knowles. 1998. Efficient secretion of two fungal cellobiohydrolases by Saccharomyces cerevisiae. Gene 63:103-112.
27. Penttilä, M., E. L. André, M. Saloheimo, P. Lehtovaara, and J. K. C. Knowles. 1987. Expression of two Trichoderma reesei endoglucanases in the yeast Saccharomyces cerevisiae. Yeast 3:175-185.
28. Poutanen, K. 1988. An α-L-arabinofuranosidase of Trichoderma reesei. J. Biotechnol. 7:271-282.
29. Poutanen, K., and J. Puls. 1988. Characteristics of Trichoderma reesei β-xylosidase and its use in the hydrolysis of solubilized xylans. Appl. Microbiol. Biotechnol. 28:425-432.
30. Reinikainen, T., L. Ruohonen, T. Nevanen, L. Laaksonen, P. Kraulis, T. A. Jones, J. K. C. Knowles, and T. T. Teeri. 1992. Investigation of the function of mutated cellulose-binding domains of Trichoderma reesei cellobiohydrolase 1. Proteins 14:475-482.
31. Robinson, A. B., J. W. Scotchler, and J. H. McKerrow. 1973. Rates of nonenzymatic deamidation of glutaminyl and asparaginyl residues in pentapeptides. J. Am. Chem. Soc. 95:8156-8159.
32. Rombouts, F. M., A. G. J. Voragen, M. F. Searle-van Leeuwen, C. C. J. M. Geraeds, H. A. Schols, and W. Plinik. 1988. The arabinases of Aspergillus niger - purification and characterization of two α-L-arabinofuranosidases and an endo-1,5-α-L-arabinase. Carbohydr. Polym. 9:25-47.
33. Saloheimo, A., B. Henrissat, A.-M. Hoffrén, O. Teleman, and M. Penttilä. 1994. A novel, small endoglucanase gene, egl5, from Trichoderma reesei isolated by expression in yeast. Mol. Microbiol. 13:219-228.
34. Saloheimo, A., and M. Penttilä. 1993. A new hydrolase gene from Trichoderma reesei, p. 291. In P. Suominen and T. Reinikainen (ed.), Proceedings of the Second TRICEL Symposium on Trichoderma reesei Cellulases and Other Hydrolases. Foundation for Biotechnical and Industrial Fermentation Research, Espoo, Finland.
35. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
36. Schwarz, W. H., H. Adelsberger, S. Jauris, C. Hertel, B. Funk, and W. L. Staudenbauer. 1990. Xylan degradation by the thermophile Clostridium stercorarium: cloning and expression of xylanase, β-D-xylosidase, and α-L-arabinofuranosidase genes in Escherichia coli. Biochem. Biophys. Res. Commun. 170:368-374.
37. Sherman, F. 1991. Getting started with yeast. Methods Enzymol. 194:3-21.
38. Stålbrand, H., A. Saloheimo, J. Vehmaanperä, B. Henrissat, and M. Penttilä. 1995. Cloning and expression in Saccharomyces cerevisiae of a Trichoderma reesei β-mannanase gene containing a cellulose binding domain. Appl. Environ. Microbiol. 61:1090-1097.
39. Strathmann, M., B. A. Hamilton, C. A. Mayeda, M. I. Simon, E. M. Meyerowitz, and M. J. Palazzolo. 1991. Transposon facilitated DNA sequencing. Proc. Natl. Acad. Sci. USA 88:1247-1250.
40. Tagawa, K., and A. Kaji. 1969. Preparation of L-arabinose-containing polysachararides and the action of an α-L-arabinofuranosidase on these polysaccharides. Carbohydr. Res. 11:292-301.
41. Tenkanen, M., J. Puls, and K. Poutanen. 1992. Two major xylanases of Trichoderma reesei. Enzyme Microb. Technol. 14:566-574.
42. Utt, E. A., C. K. Eddy, K. F. Keshav, and L. O. Ingram. 1991. Sequencing and expression of the Butyrivibrio fibrisolvens xylB gene encoding a novel bifunctional protein with β-D-xylosidase and α-L-arabinofuranosidase activities. Appl. Environ. Microbiol. 57:1227-1234.
43. von Heijne, G. 1986. A new method for predicting signal sequence cleavage sites. Nucleic Acids Res. 14:4683-4690.