Structures of the oxidized and reduced forms of nitrite reductase from Rhodobacter sphaeroides 2.4.3 at high pH: Changes in the interactions of the type 2 copper

Acta Crystallographica Section D: Biological Crystallography

Volumn 61, Issue 9, 2005, Pages 1190-1198

  Jacobson, Frida ^a   Guo, Hongwei ^b   Olesen, Kenneth ^c   Ökvist, Mats ^c   Neutze, Richard ^a   Sjölin, Lennart ^c  

^a CHALMERS UNIVERSITY OF TECHNOLOGY   (Sweden)

^b ASTRAZENECA R AND D   (Sweden)

^c UNIVERSITY OF GOTHENBURG   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

RHODOBACTER SPHAEROIDES;

COPPER; NITRITE REDUCTASE;

ARTICLE; CHEMISTRY; ENZYMOLOGY; METABOLISM; OXIDATION REDUCTION REACTION; PH; PROTEIN CONFORMATION; RHODOBACTER SPHAEROIDES; X RAY CRYSTALLOGRAPHY;

COPPER; CRYSTALLOGRAPHY, X-RAY; HYDROGEN-ION CONCENTRATION; NITRITE REDUCTASES; OXIDATION-REDUCTION; PROTEIN CONFORMATION; RHODOBACTER SPHAEROIDES;

EID: 27844519543     PISSN: 09074449     EISSN: 13990047     Source Type: Journal    
DOI: 10.1107/S0907444905017488     Document Type: Article

References (37)

1. Abraham, Z. H. L., Lowe, D. J. & Smith, B. E. (1993). Biochem. J. 296, 885-885.
2. Abraham, Z. H. L., Smith, B. E., Howes, B. D., Lowe, D. J. & Eady, R. R. (1997). Biochem. J. 324, 511-516.
3. Adman, E. T., Godden, J. W. & Turley, S. (1995). J. Biol. Chem. 270, 27458-27474.
4. Basumallick, L., Szilagyi, R. K., Zhao, Y. W., Shapleigh, J. P., Scholes, C. P. & Solomon, E. I. (2003). J. Am. Chem. Soc. 125, 14784-14792.
5. Boulanger, M. J., Kukimoto, M., Nishiyama, M., Horinouchi, S. & Murphy, M. E. P. (2000). J. Biol. Chem. 275, 23957-23964.
6. Boulanger, M. J. & Murphy, M. E. P. (2002). J. Mol. Biol. 315, 1111-1127.
7. Brünger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J.-S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T. & Warren, G. L. (1998). Acta Cryst. D54, 905-921.
8. Chakrabarti, P. (1989). Biochemistry, 28, 6081-6085.
9. Dodd, F. E., Hasnain, S. S., Abraham, Z. H. L., Eady, R. R. & Smith, B. E. (1997). Acta Cryst. D53, 406-418.
10. Dodd, F. E., Van Beeumen, J., Eady, R. R. & Hasnain, S. S. (1998). J. Mol. Biol. 282, 369-382.
11. Ellis, M. J., Dodd, F. E., Sawers, G., Eady, R. R. & Hasnain, S. S. (2003). J. Mol. Biol. 328, 429-438.
12. Ellis, M. J., Dodd, F. E., Strange, R. W., Prudencio, M., Sawers, G., Eady, R. R. & Hasnain, S. S. (2001). Acta Cryst. D57, 1110-1118.
13. Farver, O., Eady, R. R., Sawers, G., Prudencio, M. & Pecht, I. (2004). FEBS Lett. 561, 173-176.
14. Fee, J. A. (1975). Struct. Bonding, 23, 1-60.
15. Fülöp, V., Moir, J. W. B., Ferguson, S. J. & Hajdu, J. (1995). Cell, 81, 369-377.
16. Howes, B. D., Abraham, Z. H. L., Lowe, D. J., Bruser, T., Eady, R. R. & Smith, B. E. (1994). Biochemistry, 33, 3171-3177.
17. Inoue, T., Gotowda, M., Deligeer, Kataoka, K., Yamaguchi, K., Suzuki, S., Watanabe, H., Gohow, M. & Kai, Y. (1998). J. Biochem. (Tokyo), 124, 876-879.
18. Jones, T. A., Zou, J. Y., Cowan, S. W. & Kjeldgaard, M. (1991). Acta Cryst. A47, 110-119.
19. Kukimoto, M., Nishiyama, M., Murphy, M. E. P., Turley, S., Adman, E. T., Horinouchi, S. & Beppu, T. (1994). Biochemistry, 33, 5246-5252.
20. Lamzin, V. S. & Wilson, K. S. (1993). Acta Cryst. D49, 129-147.
21. Laskowski, R. A., MacArthur, M. W., Moss, D. S. & Thornton, J. M. (1993). J. Appl. Cryst. 26, 283-291.
22. Libby, E. & Averill, B. A. (1992). Biochem. Biophys. Res. Commun. 187, 1529-1535.
23. Murphy, M. E. P., Turley, S. & Adman, E. T. (1997). J. Biol. Chem. 272, 28455-28460.
24. Navaza, J. (1994). Acta Cryst. A50, 157-163.
25. Nurizzo, D., Silvestrini, M. C., Mathieu, M., Cutruzzola, F., Bourgeois, D., Fulop, V., Hajdu, J., Brunori, M., Tegoni, M. & Cambillau, C. (1997). Structure, 5, 1157-1171.
26. Olesen, K., Veselov, A., Zhao, Y. W., Wang, Y. S., Danner, B., Scholes, C. P. & Shapleigh, J. P. (1998). Biochemistry, 37, 6086-6094.
27. Otwinowski, Z. & Minor, W. (1997). Methods Enzymol. 276, 307-326.
28. Pierloot, K., De Kerpel, J. O. A., Ryde, U., Olsson, M. H. M. & Roos, B. O. (1998). J. Am. Chem. Soc. 120, 13156-13166.
29. Ryde, U., Olsson, M. H. M., Roos, B. O., De Kerpel, J. O. A. & Pierloot, K. (2000). J. Biol. Inorg. Chem. 5, 565-574.
30. Sjogren, T. & Hajdu, J. (2001). J. Biol. Chem. 276, 29450-29455.
31. Strange, R. W., Murphy, L. M., Dodd, F. E., Abraham, Z. H. L., Eady, R. R., Smith, B. E. & Hasnain, S. S. (1999). J. Mol. Biol. 287, 1001-1009.
32. Suzuki, S., Kataoka, K., Yamaguchi, K., Inoue, T. & Kai, Y. (1999). Coord. Chem. Rev. 192, 245-265.
33. Sykes, A. G. (1991). Struct. Bonding, 75, 175-224.
34. Tocheva, E. I., Rosell, F. I., Mauk, A. G. & Murphy, M. E. P. (2004). Science, 304, 867-870.
35. Tosques, I. E., Kwiatkowski, A. V., Shi, J. R. & Shapleigh, J. P. (1997). J. Bacteriol. 179, 1090-1095.
36. Wijma, H. J., Boulanger, M. J., Molon, A., Fittipaldi, M., Huber, M., Murphy, M. E. P., Verbeet, M. P. & Canters, G. W. (2003). Biochemistry, 42, 4075-4083.
37. Zumft, W. G. (1997). Microbiol. Mol. Biol. Rev. 61, 533-616.