Langevin trajectories between fixed concentrations

Physical Review Letters

Volumn 94, Issue 21, 2005, Pages

  Nadler, B ^a,b   Schuss, Z ^b   Singer, A ^b  

^a YALE UNIVERSITY   (United States)

^b TEL AVIV UNIVERSITY   (Israel)

Author keywords

[No Author keywords available]

Indexed keywords

LANGEVIN TRAJECTORIES; PHASE SPACE DENSITY; PROTEIN CHANNEL; STEADY STATE INFLUX;

BIOLOGICAL MEMBRANES; COMPUTER SIMULATION; DENSITY (SPECIFIC GRAVITY); DIFFUSION; FLUXES; PROTEINS;

HIGH ENERGY PHYSICS;

ION CHANNEL;

BIOLOGICAL MODEL; BIOPHYSICS; CHEMISTRY; COMPUTER SIMULATION; DIFFUSION; MEMBRANE; METABOLISM; PHYSICS; PROBABILITY; PROCEDURES; STATISTICAL MODEL; THERMODYNAMICS;

BIOPHYSICS; COMPUTER SIMULATION; DIFFUSION; ION CHANNELS; MARKOV CHAINS; MEMBRANES; MODELS, BIOLOGICAL; MODELS, STATISTICAL; PHYSICS; THERMODYNAMICS;

EID: 27744468723     PISSN: 00319007     EISSN: 10797114     Source Type: Journal    
DOI: 10.1103/PhysRevLett.94.218101     Document Type: Article

References (23)

1. B. Hille, Ionic Channels of Excitable Membranes (Sinauer Associates Inc., Sunderland, 2001), 3rd ed., p. 1.
2. R.S. Berry and S. Rice, J. Ross, Physical Chemistry (Oxford University Press, New York, 2000), 2nd ed.
3. W. Nonner and R.S. Eisenberg, Biophys. J. 75, 1287 (1998). BIOJAU 0006-3495
4. Z. Schuss, B. Nadler, and R.S. Eisenberg, Phys. Rev. E, 64, 036116 (2001). PLEEE8 1063-651X 10.1103/PhysRevE.64.036116
5. R.S. Eisenberg, M.M. Kłosek, and Z. Schuss, J. Chem. Phys. 102, 1767 (1995). JCPSA6 0021-9606 10.1063/1.468704
6. Z. Schuss, Theory and Applications of Stochastic Differential Equations, (Wiley, NY, 1980).
7. M.P. Allen and D.J. Tildesley. Computer Simulation of Liquids, (Oxford University Press, Oxford, 1991).
8. B. Corry, S. Kuyucak, and S. Chung, Biophys. J. 78, 2364 (2000). BIOJAU 0006-3495
9. M. Berkowitz and J.A. McCammon, Chem. Phys. Lett. 90, 215 (1982). CHPLBC 0009-2614 10.1016/0009-2614(82)80028-6
10. C.L Brooks, III and M. Karplus, J. Chem. Phys. JCPSA6 0021-9606 79, 6312 (1983). 10.1063/1.445724
11. T. Naeh, Ph.D. dissertation, Tel-Aviv University, 2001.
12. B. Nadler and T. Naeh, Z. Schuss, SIAM J Appl. Math. SMJMAP 0036-1399 62, 433 (2001). 10.1137/S0036139900372363
13. B. Nadler, T. Naeh, and Z. Schuss, SIAM J Appl. Math. SMJMAP 0036-1399 63, 850 (2003). 10.1137/S0036139901393688
14. W. Im, S. Seefeld, and B. Roux, Biophys. J. 79, 788 (2000). BIOJAU 0006-3495
15. A. Singer and Z. Schuss, Phys. Rev. E 71, 026115 (2005). PLEEE8 1063-651X 10.1103/PhysRevE.71.026115
16. P. Mandl, Analytical Treatment of One-Dimensional Markov Processes, (Springer Verlag, NY, 1968).
17. S. Karlin and H.M. Taylor, A First Course in Stochastic Processes (Academic Press, NY, 1975).
18. M. Schumaker, J. Chem. Phys. 117, 2469 (2002). JCPSA6 0021-9606 10.1063/1.1492802
19. B. Corry, M. Hoyles, T.W. Allen, M. Walker, S. Kuyucak, and S.H. Chung, Biophys. J. 82, 1975 (2002). BIOJAU 0006-3495
20. A. Singer, Z. Schuss, B. Nadler, and R.S. Eisenberg, Phys. Rev. E PLEEE8 1063-651X 70, 061106 (2004). 10.1103/PhysRevE.70.061106
21. T.W. Marshall and E.J. Watson, J. Phys. A JPHAC5 0305-4470 18, 3531 (1985). 10.1088/0305-4470/18/18/016
22. P.S. Hagan, C.R. Doering, and C.D. Levermore, SIAM J Appl. Math. SMJMAP 0036-1399 49, 1480 (1989). 10.1137/0149090
23. M.A. Burschka and U.M. Titulaer, J. Stat. Phys. 25, 569 (1981). JSTPSB 0022-4715 10.1007/BF01010804