Aurigamonas solis n. gen., n. sp., a soil-dwelling predator with unusual helioflagellate organisation and belonging to a Novel Clade within the Cercozoa

Protist

Volumn 156, Issue 3, 2005, Pages 335-354

  Vickerman, Keith ^a   Appleton, Paul L ^a   Clarke, Ken J ^b   Moreira, David ^c  

^a UNIVERSITY OF GLASGOW   (United Kingdom)

^b FRESHWATER BIOLOGICAL ASSOCIATION   (United Kingdom)

^c UNIVERSITÉ PARIS SUD   (France)

Author keywords

Aurigamonas solis; Cercozoa; Haptopodia; Polyubiquitin inserts; Predation; SSU rDNA sequence

Indexed keywords

CERCOZOA; HELIOZOA; MASTIGOPHORA (FLAGELLATES);

EID: 27544433472     PISSN: 14344610     EISSN: 16180941     Source Type: Journal    
DOI: 10.1016/j.protis.2005.07.003     Document Type: Article

References (35)

1. J.M. Archibald, and P.J. Keeling Actin and ubiquitin protein sequences support a cercozoan/foraminiferan ancestry for the plasmodiophorid plant pathogens J Eukaryot Microbiol 51 2004 113 118
2. J.M. Archibald, D. Longet, J. Pawlowski, and P.J. Keeling A novel polyubiquitin structure in Cercozoa and Foraminifera: evidence for a new eukaryotic supergroup Mol Biol Evol 20 2003 62 66
3. D. Bass, and T. Cavalier-Smith Phylum-specific environmental DNA analysis reveals remarkably high global biodiversity of Cercozoa (Protozoa) Int J Syst Evol Microbiol 54 2004 2393 2404
4. D. Bass, D. Moreira, P. López-García, S. Polet, E.E. Chao, S. von der Heyden, J. Pawlowski, and T. Cavalier-Smith Polyubiquitin insertions and the phylogeny of Cercozoa and Rhizaria Protist 156 2005 149 161
5. G.B. Bouck, and H. Ngô Cortical structure and function in euglenoids, with reference to trypanosomes, ciliates and dinoflagellates Int Rev Cytol 169 1996 267 318
6. B.E. Brooker Mastigonemes in a bodonid flagellate Exp Cell Res 37 1965 300 305
7. T. Cavalier-Smith, and E.-E. Chao Phylogeny and Classification of Cercozoa (Protozoa) Protist 154 2003 341 358
8. T. Cavalier-Smith, E.E. Chao, and T.E.P. Allsopp Ribosomal RNA evidence for chloroplast loss within Heterokonta: pedinellid relationships and a revised classification of ochristan algae Arch Protistenkd 145 1995 209 220
9. F. Ekelund, and D.J. Patterson Some heterotrophic soil flagellates from cultivated garden soil in Australia Arch Protistenkd 148 1997 461 478
10. F. Ekelund, N. Daugbjerg, and L. Fredslund Phylogeny of Heteromita, Cercomonas and Thaumatomonas based on SSU rDNA sequences, including the description of Neocercomonas jutlandica sp. nov., gen, nov Europ J Protistol 40 2004 119 135
11. Felsenstein J (1999) PHYLIP - Phylogeny Inference Package v. 3.6. University of Washington. Distributed by the author.
12. B.J. Finlay, and T. Fenchel Protozoan community structure in a fractal soil environment Protist 152 2001 203 218
13. B.J. Finlay, H.I.J. Black, S. Brown, K.J. Clarke, G.F. Esteban, R.M. Hindle, J.L. Olmo, A. Rollett, and K. Vickerman Estimating the growth potential of the soil protozoan community Protist 151 2000 69 80
14. W. Foissner Diversity and Ecology of Soil Flagellates D.J. Patterson J. Larsen The Biology of Free-Living Heterotrophic Flagellates, Systematics Association 1991 Clarendon Press Oxford 93 112
15. S. Guindon, and O. Gascuel A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood Syst Biol 52 2003 696 704
16. S.A. Karpov Flagellate Phylogeny: an Ultrastructural Approach B.S.C. Leadbeater J.C. Green The Flagellates. Unity, Diversity and Evolution. Systematics Association Special Volume Series 59 2000 Taylor and Francis London
17. S.A. Karpov, and B. Zhukov Ultrastructure and taxonomic position of Apusomonas proboscidea Alexeieff Arch Protistenkd 131 1986 13 26
18. E. Kinoshita, Y. Shigenaka, and T. Suzaki The ultrastructure of contractile tubules in the heliozoan Actinophrys sol and their possible involvement in rapid axopodial contraction J Eukaryot Microbiol 48 2001 519 526
19. E. Kinoshita, T. Suzaki, Y. Shigenaka, and M. Sugiyama Ultrastructure and rapid axopodial contraction of a Heliozoa, Raphidiophrys contractilis Sp.Nov J Eukaryot Microbiol 42 1995 283 288
20. J. Larsen, and D.J. Patterson Some flagellates (Protista) from tropical marine sediments J Nat Hist 24 1990 801 937
21. P. López-García, F. Rodríguez-Valera, C. Pedrós-Alió, and D. Moreira Unexpected diversity of small eukaryotes in deep-sea Antarctic plankton Nature 409 2001 603 607
22. A.J. Merz, and H.N. Higgs Listeria motility: biophysics pushes things forward Curr Biol 13 2003 R302 R304
23. K.A. Mikrjukov, and D.J. Patterson Taxonomy and Phylogeny of Heliozoa. III. Actinophryids Acta Protozool 40 2001 3 25
24. S.I. Nikolaev, C. Berney, J.F. Fahrni, I. Bolivar, S. Polet, A.P. Mylnikov, V.V. Aleshin, N.B. Petrov, and J. Pawlowski The twilight of Heliozoa and rise of Rhizaria, an emerging supergroup of amoeboid eukaryotes Proc Natl Acad Sci USA 101 2004 8066 8071
25. F.C. Page A New Key to Freshwater and Soil Gymnamoebae 1988 Freshwater Biological Association Ambleside
26. F.C. Page, and F.J. Siemensma Nackte Rhizopoda und Heliozoea, Protozoenfauna Band 2 1991 Gustav Fischer Verlag Stuttgart
27. H. Philippe MUST, a computer package of management utilities for sequences and trees Nucleic Acids Res 21 1993 5264 5272
28. T.D. Pollard, L. Blanchoin, and R.D. Mullins Molecular mechanisms controlling actin filament dynamics in in non-muscle cells Rev Biophys Biomol Struct 29 2000 545 576
29. F. Ronquist, and J.P. Huelsenbeck MrBayes 3: Bayesian phylogenetic inference under mixed models Bioinformatics 19 2003 1572 1574
30. M. Sagakuchi, K. Hausmann, and T. Suzaki Food capture and adhesion by the heliozoan Actinophrys sol Protoplasma 203 1998 130 137
31. M. Sagakuchi, H. Murakami, and T. Suzaki Involvement of a 40-kDa glycoprotein in food recognition, prey capture and induction of phagocytosis in the protozoan Actinophrys sol Protist 152 2001 33 41
32. M. Sagakuchi, T. Suzaki, S.M.M.K. Khan, and K. Hausmann Food capture by kinetocysts in the heliozoan Raphidiophrys contractilis Europ J Protistol 37 2002 453 458
33. H. Sandon The Composition and Distribution of the Protozoan Fauna of the Soil 1927 Oliver and Boyd Edinburgh
34. L.G. Tilney, and D.A. Portnoy Actin filaments and the growth, movement and spread of the intracellular bacterial parasite Listeria monocytogenes J Cell Biol 109 1989 1597 1608
35. K. Vickerman Revolution among the Protozoa G.H. Coombs K. Vickerman M.A. Sleigh A. Warren Evolutionary Relationships among Protozoa 1998 Chapman & Hall London 1 24