The active component in the flax-retting system of the zygomycete Rhizopus oryzae sb is a family 28 polygalacturonase

Journal of Industrial Microbiology and Biotechnology

Volumn 32, Issue 10, 2005, Pages 431-438

  Zhang, Jing ^a   Henriksson, Hongbin ^a,b   Szabo, Istvan J ^a,c   Henriksson, Gunnar ^b   Johansson, Gunnar ^a  

^a UPPSALA UNIVERSITY   (Sweden)

^b ROYAL INSTITUTE OF TECHNOLOGY   (Sweden)

^c CENTRAL VETERINARY INSTITUTE   (Hungary)

Author keywords

Enzymatic retting; Pectin biodegradation; Polygalacturonase; Ralstonia solanacearum; Rhizopus oryzae

Indexed keywords

POLYGALACTURONASE;

AMINO ACID SEQUENCE; AMINO TERMINAL SEQUENCE; ARTICLE; ENZYME PURIFICATION; ENZYME SUBSTRATE; FLAX; ISOELECTRIC POINT; MASS SPECTROMETRY; MOLECULAR WEIGHT; NONHUMAN; RHIZOPUS ORYZAE; ZYGOMYCETES;

AMINO ACID SEQUENCE; FUNGAL PROTEINS; INDUSTRIAL MICROBIOLOGY; MOLECULAR SEQUENCE DATA; MOLECULAR WEIGHT; PECTINS; POLYGALACTURONASE; RHIZOPUS; SEQUENCE ALIGNMENT; SUBSTRATE SPECIFICITY;

BACTERIA (MICROORGANISMS); LINUM USITATISSIMUM; RALSTONIA SOLANACEARUM; RHIZOPUS ORYZAE; ZYGOMYCETES;

EID: 27444435985     PISSN: 13675435     EISSN: 14765535     Source Type: Journal    
DOI: 10.1007/s10295-005-0014-y     Document Type: Article

References (31)

1. Akin DE, Morrison WH III, Gamble GR, Rigsby LL, Henriksson G, Eriksson KEL (1997) Effect of retting enzymes on the structure and composition of flax cell walls. Text Res J 67:279-287
2. Akin DE, Rigsby LL, Henriksson G, Eriksson KEL (1998) Structural effects on flax stems by three potential retting fungi. Text Res J 68(7):515-519
3. Akin DE, Slomczynski D, Rigsby LL, Eriksson KEL (2002) Retting flax with endopolygalactouronase from Rhizopus oryzae. Text Res J 72(1):27-34
4. Bateman DF, Beer SV (1965) Simultaneous production and synergistic action of oxalic acid and polygalacturonase during pathogenesis by Sclerotium rolfsii. Phytopathology 55:204-211
5. Dahlman O, Rydlund A, Lindquist A (1997) Characterization of carbohydrates from chemical pulps using capillary electrophoresis and MALDI-TOF-MS. The 9th international symposium on wood and pulping chemistry, Montreal, Canada
6. Dujardin A (1942) Vlas roten. De Westvlaamsche Boekhandel s.v. Groeninghe drukkerij, Kortrijk
7. Green F, Clausen CA, Kuster TA, Highley TL (1995) Induction of polygalacturonase and the formation of oxalic acid by pectin in brown-rot fungi. World J Microbiol Biotechnol 11:519-524
8. Hellman U, Wernstedt C, Gonez J, Heldin CH (1995) Improvement of an in-gel digestion procedure for the micropreparation of internal protein-fragments for amino-acid sequencing. Anal Biochem 224:451-455
9. Henriksson G, Akin DE, Hanlin RT, Rodriguez C, Archibald DD, Rigsby LL, Eriksson KEL (1997) Identification and retting efficiencies of fungi isolated from dew-retted flax in the United States and Europe. Appl Environ Microbiol 63(10):3950-3956
10. Henriksson G, Akin DE, Rigsby LL, Patel N, Eriksson KEL (1997) Influence of chelating agents and mechanical pretreatment on enzymatic retting of flax. Text Res J 67(11):829-836
11. Henriksson G, Akin DE, Slomczynski D, Eriksson KEL (1999) Production of highly efficient enzymes for flax retting by Rhizomucor pusillus. J Biotechnol 68:115-123
12. Henrissat B (1991) A classification of glycosyl hydrolases based on amino acid sequence similarities. Biochem J 280:309-316
13. Huang J, Schell MA (1990) DNA Sequence analysis of pglA and mechanism of export of its polygalacturonase product from Pseudomonas solanacearum. J Bacteriol 172:3879-3887
14. Johansson G, StAh̊lberg J, Lindeberg G, Engström Å, Pettersson G (1989) Isolated fungal cellulose terminal domains and a synthetic minimum analogue bind to cellulose. FEBS Lett 243:389-393
15. Maizel JV (1969) Fundamental techniques in virology. In: Habel K, Salzmann NP (eds) Academic, New York, pp 334-362
16. Merril CR, Goldman D, van Keuren ML (1984) Gel protein stains: silver stain. Methods Enzymol 104:441-447
17. Miller GL (1959) Use of dinitrosalicylic acid reagents for determination of reducing sugars. Anal Chem 31:426-428
18. Rognes H, Gellerstedt G, Henriksson G (2000) Optimization of flax fiber separation by leaching. Cellulose Chem Technol 34:331-340
19. Rosenfeld J, Capdevielle J, Guillemot JC, Ferrara P (1992) Ingel digestion of proteins for internal sequence-analysis after 1-dimensional or 2-dimensional gel-electrophoresis. Anal Biochem 203:173-179
20. Saito K, Takakuwa N, Oda Y (2004) Purification of the extracellular pectinolytic enzyme from the fungus Rhizopus oryzae NBRC 4707. Microbiol Res 159(1):83-86
21. Sakai T, Sakamoto T, Hallaert J, van Damme EJ (1993) Pectin, pectinase and protopectinase: production, properties and applications. Adv Appl Microbiol V 39:213-294
22. Sharma HSS (1988) Chemical retting of flax using chelating compounds. Ann Appl Biol 113:159-165
23. Sharma HSS, van Sumere CF (1992) The biology and Processing of flax. M Publications, Belfast, pp 157-198
24. Szabo IJ, Johansson G, Pettersson G (1996) Optimized cellulase production by Phanerochaete chrysosporium: control of catabolite repression by fed-batch cultivation. J Biotechnol 48:221-230
25. Thakur BR, Singh RK, Handa AK (1997) Chemistry and uses of pectin - a review. Crit Rev Food Sci Nutr 37(1):47-73
26. Turner NA, Needs EC, Khan JA, Vulfson EN (2001) Analysis of conformational states Candida rugosa lipase in solution: implications for mechanism of interfacial activation and separation of open and closed forms. Biotechnol Bioeng 72(1):108-118
27. Van Sumere CF, Sharma HSS (1991) Analysis of fine flax fiber produced by enzymatic retting. Asp Appl Biol 28:15-20
28. Van Sumere CF (1992) Retting of flax with special reference to enzymatic retting. In : Sharma HSS, van Sumere CF (eds) The biology and processing of flax. M Publications, Belfast, pp 157-198
29. Vogel HJ (1964) Distribution of lysine pathways among fungi: evolutionary implications. Am Nat 98:435-446
30. Zhang J, Henriksson G, Johansson G (2000) Polygalacturonase is the key component in enzyme retting of flax. J Biotechnol 81:85-89
31. Zhang J, Johansson G, Pettersson B, Akin DE, Foulk JA, Khalili S, Henriksson G (2003) Effects of acidic media preincubation on flax enzyme retting efficiency. Text Res J 73(3):263-267