Flexible lipid bilayers in implicit solvent

Physical Review E - Statistical, Nonlinear, and Soft Matter Physics

Volumn 72, Issue 1, 2005, Pages

  Brannigan, Grace ^a   Philips, Peter F ^a   Brown, Frank L H ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BILAYER STRUCTURES; HYDROPHOBIC EFFECT; MOLECULAR FLEXIBILITY;

COMPUTER SIMULATION; ELASTIC MODULI; HYDROPHOBICITY; MATHEMATICAL MODELS; SOLVENTS;

LIPIDS;

LIPID; LIPID BILAYER; SOLVENT;

BIOPHYSICS; CHEMICAL MODEL; CHEMICAL STRUCTURE; CHEMISTRY; LIPID BILAYER; MONTE CARLO METHOD; PROCEDURES; STATIC ELECTRICITY; STATISTICAL MODEL; THEORETICAL MODEL; THERMODYNAMICS;

BIOPHYSICS; LIPID BILAYERS; LIPIDS; MODELS, CHEMICAL; MODELS, MOLECULAR; MODELS, STATISTICAL; MODELS, THEORETICAL; MONTE CARLO METHOD; SOLVENTS; STATIC ELECTRICITY; THERMODYNAMICS;

EID: 27244453417     PISSN: 15393755     EISSN: 15502376     Source Type: Journal    
DOI: 10.1103/PhysRevE.72.011915     Document Type: Article

References (35)

1. M. Bloom, E. Evans, and O. G. Mouritsen, Q. Rev. Biophys. QURBAW 0033-5835 24, 293 (1991).
2. J.-M. Drouffe, A. C. Maggs, and S. Leibler, Science SCIEAS 0036-8075 254, 1353 (1991).
3. R. Goetz and R. Lipowsky, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.476160 108, 7397 (1998)
4. R. Goetz, G. Gompper, and R. Lipowsky, Phys. Rev. Lett. PRLTAO 0031-9007 10.1103/PhysRevLett.82.221 82, 221 (1999).
5. B. Smit, P. A. J. Hilbers, K. Esselink, L. A. M. Rupert, N. M. van Os, and A. G. Schlijper, J. Phys. Chem. JPCHAX 0022-3654 10.1021/j100169a052 95, 6361 (1991)
6. R. D. Groot and K. L. Rabone, Biophys. J. BIOJAU 0006-3495 81, 725 (2001)
7. G. Ayton, S. G. Bardenhagen, P. McMurty, D. Sulsky, and G. A. Voth, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.1356001 114, 6913 (2001)
8. J. C. Shelley, M. Y. Shelley, R. C. Reeder, S. Bandyopadhyay, and M. L. Klein, J. Phys. Chem. B JPCBFK 1089-5647 10.1021/jp010238p 105, 4464 (2001)
9. T. Soddemann, B. Dunweg, and K. Kremer, Eur. Phys. J. E EPJSFH 1292-8941 10.1007/s10189-001-8054-4 6, 409 (2001)
10. J. Shillcock and R. Lipowsky, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.1498463 117, 5048 (2002)
11. S. Yamamoto, Y. Maruyama, and S.-A. Hyodo, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.1456031 116, 5842 (2002)
12. L. Rekvig, M. Kranenburg, J. Vreede, B. Hafskjold, and B. Smit, Langmuir LANGD5 0743-7463 19, 4897 (2003).
13. H. Noguchi and M. Takasu, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.1414314 115, 9547 (2001)
14. O. Farago, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.1578612 119, 596 (2003).
15. G. Brannigan and F. L. H. Brown, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.1625913 120, 1059 (2004)
16. G. Brannigan, A. C. Tamboli, and F. L. H. Brown, J. Chem. Phys. JCPSA6 0021-9606 121, 3259 (2004).
17. J. F. Nagle, Annu. Rev. Phys. Chem. ARPLAP 0066-426X 10.1146/annurev.pc. 31.100180.001105 31, 157 (1980)
18. J. F. Nagle, Faraday Discuss. Chem. Soc. FDCSB7 0301-7249 10.1039/dc9868100151 81, 151 (1986)
19. A. Ben-Shaul, in Structure and Dynamics of Membranes, edited by, R. Lipowsky, and, E. Sackmann, (Elsevier Science, Amsterdam, 1995), Vol. 1.
20. W. Rawicz, K. Oldbrich, T. McIntosh, D. Needham, and E. Evans, Biophys. J. BIOJAU 0006-3495 79, 328 (2000).
21. X. J. Li and Y. C. Chiew, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.467691 101, 2522 (1994)
22. A. Baumgartner and K. Binder, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.438608 71, 2541 (1979).
23. M. Venturoli and B. Smit, PhysChemComm PHCCFX 1460-2733 10, 7397 (1999).
24. J. F. Nagle and S. Tristram-Nagle, Biochim. Biophys. Acta BBACAQ 0006-3002 1469, 159 (2000).
25. E. A. Evans and R. Skalak, Mechanics and Thermodynamics of Biomembranes (CRC Press, Boca Raton, FL, 1980).
26. D. Frenkel and B. Smit, Understanding Molecular Simulation: From Algorithms to Applications, 2nd ed. (Academic Press, New York, 2002).
27. S. E. Feller and R. W. Pastor, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.479313 111, 1281 (1999).
28. E. Sackmann, in Structure and Dynamics of Membranes (Ref.).
29. S. J. Marrink and A. E. Mark, J. Phys. Chem. JPCHAX 0022-3654 10.1021/jp0103474 105, 6122 (2001).
30. E. Lindahl and O. Edholm, Biophys. J. BIOJAU 0006-3495 79, 426 (2000).
31. W. den Otter and W. Briels, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.1543941 118, 4712 (2003).
32. E. Lindahl and O. Edholm, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.1287423 113, 3882 (2000).
33. D. Marsh, Biochim. Biophys. Acta BBACAQ 0006-3002 1286, 183 (1996).
34. J. Israelachvili, Intermolecular and Surface Forces (Wiley, New York, 1992).
35. U. Seifert and R. Lipowsky, in Structure and Dynamics of Membranes (Ref.).