Structural organization of barley CBF genes coincident with a QTL for cold hardiness

Cold Hardiness in Plants: Molecular Genetics, Cell Biology, and Physiology

Volumn , Issue , 2006, Pages 53-63

  Stockinger, E J ^a   Cheng, H ^b   Skinner, J S ^c  

^a OHIO STATE UNIVERSITY   (United States)

^b INSTITUTE OF PLANT PROTECTION   (China)

^c OREGON STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 26944498514     PISSN: None     EISSN: None     Source Type: Book    
DOI: None     Document Type: Chapter

References (42)

1. Artus, N.N., Uemura, M., Steponkus, P.L., Gilmour, S.J., Lin, C. and Thomashow, M.F. (1996) Constitutive expression of the cold-regulated Arabidopsis thaliana COR15a gene affects both chloroplast and protoplast freezing tolerance. Proceedings of the National Academy of Sciences USA 93, 13404-13409.
2. Baker, S.S., Wilhelm, K.S. and Thomashow, M.F. (1994) The 5'-region of Arabidopsis thaliana cor15a has cis-acting elements that confer cold-, drought- and ABA-regulated gene expression. Plant Molecular Biology 24, 701-713.
3. Choi, D.W., Zhu, B. and Close, T.J. (1999) The barley (Hordeum vulgare L.) dehydrin multigene family: sequences, allele types, chromosome assignments, and expression characteristics of 11 Dhn genes of cv Dicktoo. Theoretical and Applied Genetics 98, 1234-1247.
4. Choi, D.W., Rodriguez, E.M. and Close, T.J. (2002) Barley Cbf3 gene identification, expression pattern, and map location. Plant Physiology 129, 1781-1787.
5. Crosatti, C., Nevo, E., Stanca, A.M. and Cattivelli, L. (1996) Genetic analysis of the accumulation of COR14 proteins in wild (Hordeum spontaneum) and cultivated (Hordeum vulgare) barley. Theoretical and Applied Genetics 93, 975-981.
6. Dal Bosco, C., Busconi, M., Govoni, C., Baldi, P., Stanca, A.M., Crosatti, C., Bassi, R. and Cattivelli, L. (2003) cor gene expression in barley mutants affected in chloroplast development and photosynthetic electron transport. Plant Physiology 131, 793-802.
7. Danyluk, J., Houde, M., Rassart, E. and Sarhan, F. (1994) Differential expression of a gene encoding an acidic dehydrin in chilling sensitive and freezing tolerant Gramineae species. FEBS Letters 344, 20-24.
8. Danyluk, J., Perron, A., Houde, M., Limin, A., Fowler, B., Benhamou, N. and Sarhan, F. (1998) Accumulation of an acidic dehydrin in the vicinity of the plasma membrane during cold acclimation of wheat. Plant Cell 10, 623-638.
9. Fowler, D.B., Chauvin, L.P., Limin, A.E. and Sarhan, F. (1996) The regulatory role of vernalization in the expression of low-temperature- induced genes in wheat and rye. Theoretical and Applied Genetics 93, 554-559.
10. Francia, E., Rizza, F., Cattivelli, L., Stanca, A.M., Galiba, G., Toth, B., Hayes, P.M., Skinner, J.S. and Pecchioni, N. (2004) Two loci on chromosome 5H determine lowtemperature tolerance in a 'Nure' (winter) × 'Tremois' (spring) barley map. Theoretical and Applied Genetics 108, 670-680.
11. Galiba, G., Quarrie, S.A., Sutka, J., Morounov, A. and Snape, J.W. (1995) RFLP mapping of the vernalization (Vrn1) and frost resistance (Fr1) genes on chromosome 5A of wheat. Theoretical and Applied Genetics 90, 1174-1179.
12. Gilmour, S.J., Zarka, D.G., Stockinger, E.J., Salazar, M.P., Houghton, J.M. and Thomashow, M.F. (1998) Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced COR gene expression. Plant Journal 16, 433-442.
13. Gilmour, S.J., Sebolt, A.M., Salazar, M.P., Everard, J.D. and Thomashow, M.F. (2000) Overexpression of the Arabidopsis CBF3 transcriptional activator mimics multiple biochemical changes associated with cold acclimation. Plant Physiology 124, 1854-1865.
14. Grossi, M., Giorni, E., Rizza, F., Stanca, A.M. and Cattivelli, L. (1998) Wild and cultivated barleys show differences in the expression pattern of a cold-regulated gene family under different light and temperature conditions. Plant Molecular Biology 38, 1061-1069.
15. Haake, V., Cook, D., Riechmann, J.L., Pineda, O., Thomashow, M.F. and Zhang, J.Z. (2002) Transcription factor CBF4 is a regulator of drought adaptation in Arabidopsis. Plant Physiology 130, 639-648.
16. Hayes, P.M., Blake, T., Chen, T.H.H., Tragoonrung, S., Chen, F., Pan, A. and Liu, B. (1993) Quantitative trait loci on barley (Hordeum vulgare L.) chromosome 7 associated with components of winter hardiness. Genome 36, 66-71.
17. Houde, M., Dhindsa, R.S. and Sarhan, F. (1992) A molecular marker to select for freezing tolerance in Gramineae. Molecular and General Genetics 234, 43-48.
18. Iwasaki, T., Kiyosue, T., Yamaguchi-Shinozaki, K. and Shinozaki, K. (1997) The dehydration- inducible Rd17 (Cor47) gene and its promoter region in Arabidopsis thaliana (accession No. AB004872). Plant Physiology 115, 1287-1289.
19. Jaglo-Ottosen, K.R., Gilmour, S.J., Zarka, D.G., Schabenberger, O. and Thomashow, M.F. (1998) Arabidopsis CBF1 overexpression induces COR genes and enhances freezing tolerance. Science 280, 104-106.
20. Krause, G.H. and Weis, E. (1991) Chlorophyll fluorescence and photosynthesis: the basics. Annual Review of Plant Physiology and Plant Molecular Biology 42, 313-349.
21. Limin, A.E., Danyluk, J., Chauvin, L.P., Fowler, D.B. and Sarhan, F. (1997) Chromosome mapping of low-temperature induced Wcs120 family genes and regulation of coldtolerance expression in wheat. Molecular and General Genetics 253, 720-727.
22. Liu, Q., Kasuga, M., Sakuma, Y., Abe, H., Miura, S., Yamaguchi-Shinozaki, K. and Shinozaki, K. (1998) Two transcription factors, DREB1 and DREB2, with an EREBP/AP2 DNA binding domain separate two cellular signal transduction pathways in drought- and low-temperature-responsive gene expression, respectively, in Arabidopsis. Plant Cell 10, 1391-1406.
23. Livingston, D.P. III, Olien, C.R. and Freed, R.D. (1989) Sugar composition and freezing tolerance in barley crowns at varying carbohydrate levels. Crop Science 29, 1266-1270.
24. NDong, C., Danyluk, J., Wilson, K.E., Pocock, T., Huner, N.P. and Sarhan, F. (2002) Cold-regulated cereal chloroplast late embryogenesis abundant-like proteins. Molecular characterization and functional analyses. Plant Physiology 129, 1368-1381.
25. Pan, A., Hayes, P.M., Chen, F., Chen, T.H.H., Blake, T., Wright, S., Karsai, I. and Bedo, Z. (1994) Genetic analysis of the components of winter hardiness in barley (Hordeum vulgare L.). Theoretical and Applied Genetics 89, 900-910.
26. Roberts, D.W.A. (1990) Identification of loci on chromosome 5A of wheat involved in control of cold hardiness, vernalization, leaf length, rosette growth habit, and height of hardened plants. Genome 33, 247-259.
27. Sarhan, F., Ouellet, F. and VazquezTello, A. (1997) The wheat wcs120 gene family. A useful model to understand the molecular genetics of freezing tolerance in cereals. Physiologia Plantarum 101, 439-445.
28. Snape, J.W., Semikhodskii, A., Fish, L., Sarma, R.N., Quarrie, S.A., Galiba, G. and Sutka, J. (1997) Mapping frost tolerance loci in wheat and comparative mapping with other cereals. Acta Agricultural Hungary 45, 265-270.
29. Stockinger, E.J., Gilmour, S.J. and Thomashow, M.F. (1997) Arabidopsis thaliana CBF1 encodes an AP2 domain-containing transcriptional activator that binds to the Crepeat/ DRE, a cis-acting DNA regulatory element that stimulates transcription in response to low temperature and water deficit. Proceedings of the National Academy of Sciences USA 94, 1035-1040.
30. Sukumaran, N.P. and Weiser, C.J. (1972) An excised leaflet test for evaluating potato frost tolerance. HortScience 7, 467-468.
31. Sutka, J. and Snape, J.W. (1989) Location of a gene for frost resistance on chromosome 5A of wheat. Euphytica 42, 41-44.
32. Tóth, B., Galiba, G., Feher, E., Sutka, J. and Snape, J.W. (2003) Mapping genes affecting flowering time and frost resistance on chromosome 5B of wheat. Theoretical and Applied Genetics 107, 509-514.
33. Vágújfalvi, A., Crosatti, C., Galiba, G., Dubcovsky, J. and Cattivelli, L. (2000) Two loci on wheat chromosome 5A regulate the differential cold-dependent expression of the cor14b gene in frost-tolerant and frostsensitive genotypes. Molecular and General Genetics 263, 194-200.
34. Vágújfalvi, A., Galiba, G., Cattivelli, L. and Dubcovsky, J. (2003) The cold-regulated transcriptional activator Cbf3 is linked to the frost-tolerance locus Fr-A2 on wheat chromosome 5A. Molecular Genetics and Genomics 269, 60-67.
35. Vazquez-Tello, A., Ouellet, F. and Sarhan, F. (1998) Low temperature-stimulated phosphorylation regulates the binding of nuclear factors to the promoter of Wcs120, a coldspecific gene in wheat. Molecular and General Genetics 257, 157-166.
36. Wang, H., Datla, R., Georges, F., Loewen, M. and Cutler, A.J. (1995) Promoters from kin1 and cor6.6, two homologous Arabidopsis thaliana genes: transcriptional regulation and gene expression induced by low temperature, ABA, osmoticum and dehydration. Plant Molecular Biology 28, 605-617.
37. Welin, B.V., Olson, A. and Palva, E.T. (1995) Structure and organization of two closely related low-temperature-induced dhn/lea/ rab-like genes in Arabidopsis thaliana L. Heynh. Plant Molecular Biology 29, 391-395.
38. Wilhelm, K.S. and Thomashow, M.F. (1993) Arabidopsis thaliana cor15b, an apparent homologue of cor15a, is strongly responsive to cold and ABA, but not drought. Plant Molecular Biology 23, 1073-1077.
39. Xue, G.P. (2002) An AP2 domain transcription factor HvCBF1 activates expression of coldresponsive genes in barley through interaction with a (G/a)(C/t)CGAC motif. Biochimica et Biophysica Acta 1577, 63-72.
40. Xue, G.P. (2003) The DNA-binding activity of an AP2 transcriptional activator HvCBF2 involved in regulation of low-temperature responsive genes in barley is modulated by temperature. Plant Journal 33, 373-383.
41. Yamaguchi-Shinozaki, K. and Shinozaki, K. (1994) A novel cis-acting element in an Arabidopsis gene is involved in responsiveness to drought, low-temperature, or highsalt stress. Plant Cell 6, 251-264.
42. Zhang, X., Fowler, S.G., Cheng, H., Lou, Y., Rhee, S.Y., Stockinger, E.J. and Thomashow, M.F. (2004) Freezing-sensitive tomato has a functional CBF cold response pathway, but a CBF regulon that differs from that of freezing-tolerant Arabidopsis. Plant Journal 39, 905-919.