메뉴 건너뛰기




Volumn 33, Issue 17, 2005, Pages 5565-5573

Sub-array normalization subject to differentiation

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA;

EID: 26944476709     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gki844     Document Type: Article
Times cited : (12)

References (26)
  • 3
    • 84936916896 scopus 로고
    • Robust locally weighted regression and smoothing scatterplots
    • Cleveland,W.S. (1979) Robust locally weighted regression and smoothing scatterplots. J. Am. Stat. Assoc., 74, 829-836.
    • (1979) J. Am. Stat. Assoc. , vol.74 , pp. 829-836
    • Cleveland, W.S.1
  • 7
    • 0037316303 scopus 로고    scopus 로고
    • A comparison of normalization methods for high density oligonucleotide array data based on bias and variance
    • Bolstad,B., Irizarry,R.A., Astrand,M. and Speed,T.P. (2003) A comparison of normalization methods for high density oligonucleotide array data based on bias and variance. Bioinformatics, 19, 185-193.
    • (2003) Bioinformatics , vol.19 , pp. 185-193
    • Bolstad, B.1    Irizarry, R.A.2    Astrand, M.3    Speed, T.P.4
  • 8
    • 17744401429 scopus 로고    scopus 로고
    • Centralization: A new method for the normalization of gene expression data
    • Zien,A., Aigner,T., Zimmer,R. and Lengauer,T. (2001) Centralization: A new method for the normalization of gene expression data. Bioinformatics, 17, 323-331.
    • (2001) Bioinformatics , vol.17 , pp. 323-331
    • Zien, A.1    Aigner, T.2    Zimmer, R.3    Lengauer, T.4
  • 9
    • 10444228624 scopus 로고    scopus 로고
    • Blind inversion needs distribution (BIND): The general notion and case studies
    • Goldstein,D. (ed.), Institute of Mathematical Statistics, Bethesda, MD USA
    • Li,L.M. (2003) Blind inversion needs distribution (BIND): The general notion and case studies. In Goldstein,D. (ed.), Science and Statistics: A Festschrift for Terry Speed. Institute of Mathematical Statistics, Bethesda, MD, USA, 40, 273-293.
    • (2003) Science and Statistics: A Festschrift for Terry Speed , vol.40 , pp. 273-293
    • Li, L.M.1
  • 10
    • 0034536614 scopus 로고    scopus 로고
    • Analyzing high-density oligonucleotide gene expression array data
    • Schadt,E.E., Li,C., Su,C. and Wong,W.H. (2000) Analyzing high-density oligonucleotide gene expression array data. J. Cell. Biochem., 80, 192-202.
    • (2000) J. Cell. Biochem. , vol.80 , pp. 192-202
    • Schadt, E.E.1    Li, C.2    Su, C.3    Wong, W.H.4
  • 11
    • 0035752668 scopus 로고    scopus 로고
    • Feature extraction and normalization algorithms for high-density oligonucleotide gene expression array data
    • Schadt,E.E., Li,C., Ellis,B. and Wong,W.H. (2001) Feature extraction and normalization algorithms for high-density oligonucleotide gene expression array data. J. Cell. Biochem. Suppl, 37, 120-125.
    • (2001) J. Cell. Biochem. , vol.37 , Issue.SUPPL. , pp. 120-125
    • Schadt, E.E.1    Li, C.2    Ellis, B.3    Wong, W.H.4
  • 12
    • 0035875553 scopus 로고    scopus 로고
    • Issues in cDNA microarray analysis: Quality filtering,channel normalization, models of variations and assessment of gene effects
    • Tseng,G.C., Oh,M., Rohlin,L., Liao,J.C. and Wong,W.H. (2001) Issues in cDNA microarray analysis: Quality filtering,channel normalization, models of variations and assessment of gene effects. Nucleic Acids Res., 29, 2549-2557.
    • (2001) Nucleic Acids Res. , vol.29 , pp. 2549-2557
    • Tseng, G.C.1    Oh, M.2    Rohlin, L.3    Liao, J.C.4    Wong, W.H.5
  • 13
    • 0037188875 scopus 로고    scopus 로고
    • Normalization and analysis of DNA microarray data by self-consistensy and local regression
    • Kepler,T., Crosby,L. and Morgan,K. (2002) Normalization and analysis of DNA microarray data by self-consistensy and local regression Genome Biol., 3, 1-12.
    • (2002) Genome Biol. , vol.3 , pp. 1-12
    • Kepler, T.1    Crosby, L.2    Morgan, K.3
  • 15
    • 10444274365 scopus 로고    scopus 로고
    • An algorithm for computing exact least trimmed squares estimate of simple linear regression with constraints
    • Li,L.M. (2004) An algorithm for computing exact least trimmed squares estimate of simple linear regression with constraints. Comput. Stat. Data Anal., 48, 717-734.
    • (2004) Comput. Stat. Data Anal. , vol.48 , pp. 717-734
    • Li, L.M.1
  • 20
    • 0037303824 scopus 로고    scopus 로고
    • Induced gene expression in human brain after the split from chimpanzee
    • Gu,J. and Gu,X. (2003) Induced gene expression in human brain after the split from chimpanzee. Trends Genet., 19, 63-65.
    • (2003) Trends Genet. , vol.19 , pp. 63-65
    • Gu, J.1    Gu, X.2
  • 21
    • 0035853552 scopus 로고    scopus 로고
    • Regulation of longevity and stress resistance by sch9 in yeast
    • Fabrizio,P., Pozza,F., Pletcher,S.D., Gendron,C. and Longo,V.D. (2001) Regulation of longevity and stress resistance by sch9 in yeast. Science, 292, 288-290.
    • (2001) Science , vol.292 , pp. 288-290
    • Fabrizio, P.1    Pozza, F.2    Pletcher, S.D.3    Gendron, C.4    Longo, V.D.5
  • 22
    • 1342294092 scopus 로고    scopus 로고
    • Normalization for cDNA microarray data: A robust composite method addressing single and multiple slide systematic variation
    • Yang,Y.H., Dudoit,S., Luu,P., Lin,D.M., Peng,V., Ngai,J. and Speed,T.P. (2002) Normalization for cDNA microarray data: A robust composite method addressing single and multiple slide systematic variation. Nucleic Acids Res., 30, e15.
    • (2002) Nucleic Acids Res. , vol.30
    • Yang, Y.H.1    Dudoit, S.2    Luu, P.3    Lin, D.M.4    Peng, V.5    Ngai, J.6    Speed, T.P.7
  • 23
    • 0012572299 scopus 로고    scopus 로고
    • A variance-stabilizing transformation for gene-expression microarray data
    • Durbin,B.P., Hardin,J.S., Hawkins,D.M. and Rocke,D.M. (2002) A variance-stabilizing transformation for gene-expression microarray data. Bioinformatics, 18, S105-S110.
    • (2002) Bioinformatics , vol.18
    • Durbin, B.P.1    Hardin, J.S.2    Hawkins, D.M.3    Rocke, D.M.4
  • 24
    • 11244346557 scopus 로고    scopus 로고
    • Variance stabilization applied to microarray data calibration and to the quantification of differential expression
    • Huber,W., Heydebreck,V., Sültmann,H., Poustka,A. and Vingron,M. (2002) Variance stabilization applied to microarray data calibration and to the quantification of differential expression. Bioinformatics, 18, S96-S104.
    • (2002) Bioinformatics , vol.18
    • Huber, W.1    Heydebreck, V.2    Sültmann, H.3    Poustka, A.4    Vingron, M.5
  • 25
    • 4244123075 scopus 로고    scopus 로고
    • Model-based analysis of oligonucleotide arrays: Model validation, design issues and standard error applications
    • Li,C. and Wong,W.H. (2001) Model-based analysis of oligonucleotide arrays: Model validation, design issues and standard error applications. Genome Biol., 2, 1-11.
    • (2001) Genome Biol. , vol.2 , pp. 1-11
    • Li, C.1    Wong, W.H.2
  • 26
    • 27644521019 scopus 로고    scopus 로고
    • Stochastic models inspired by hybridization theory for short oligonucleotide arrays
    • San Diego, CA98-106RECOMB 2004
    • Wu,Z. and Irizarry,R.A. (2004) Stochastic models inspired by hybridization theory for short oligonucleotide arrays. San Diego, CA98-106RECOMB 2004.
    • (2004)
    • Wu, Z.1    Irizarry, R.A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.