-
1
-
-
0039116206
-
Structural differences between mesophilic, moderately thermophilic and extremely thermophilic protein subunits: Results of a comprehensive survey
-
Szilagyi, A.; Zavodszky, P. Structural differences between mesophilic, moderately thermophilic and extremely thermophilic protein subunits: Results of a comprehensive survey. Structure 2000, 8, 493-504.
-
(2000)
Structure
, vol.8
, pp. 493-504
-
-
Szilagyi, A.1
Zavodszky, P.2
-
2
-
-
0036931447
-
Toward the physical basis of thermophilic proteins: Linking of enriched polar interactions and reduced heat capacity of unfolding
-
Zhou, H.-X. Toward the physical basis of thermophilic proteins: Linking of enriched polar interactions and reduced heat capacity of unfolding. Biophys. J. 2002, 83, 3126-3133.
-
(2002)
Biophys. J.
, vol.83
, pp. 3126-3133
-
-
Zhou, H.-X.1
-
3
-
-
0031614960
-
Proteins from hyperthermophiles: Stability and enzymic catalysis close to the boiling point of water
-
Biotechnology of Extremophiles
-
Ladenstein, R.; Antranikian, G. Proteins from hyperthermophiles: Stability and enzymic catalysis close to the boiling point of water. Adv. Biochem. Eng./Blotechnol. 1998, 61, 37-85 (Biotechnology of Extremophiles).
-
(1998)
Adv. Biochem. Eng./Blotechnol.
, vol.61
, pp. 37-85
-
-
Ladenstein, R.1
Antranikian, G.2
-
4
-
-
0034495733
-
Aromatic clusters: A determinant of thermal stability of thermophilic proteins
-
Kannan, N.; Vishveshwara, S. Aromatic clusters: A determinant of thermal stability of thermophilic proteins. Protein Eng. 2000, 13, 753-761.
-
(2000)
Protein Eng.
, vol.13
, pp. 753-761
-
-
Kannan, N.1
Vishveshwara, S.2
-
5
-
-
0036301197
-
Structural basis for thermophilic protein stability: Structures of thermophilic and mesophilic malate dehydrogenases
-
Dalhus, B.; Saarinen, M.; Sauer, U. H.; Eklund, P.; Johansson, K.; Karlsson, A.; Ramaswamy, S.; Bjork, A.; Synstad, B.; Naterstad, K.; Sirevag, R.; Eklund, H. Structural basis for thermophilic protein stability: Structures of thermophilic and mesophilic malate dehydrogenases. J. Mol. Biol. 2002, 318, 707-721.
-
(2002)
J. Mol. Biol.
, vol.318
, pp. 707-721
-
-
Dalhus, B.1
Saarinen, M.2
Sauer, U.H.3
Eklund, P.4
Johansson, K.5
Karlsson, A.6
Ramaswamy, S.7
Bjork, A.8
Synstad, B.9
Naterstad, K.10
Sirevag, R.11
Eklund, H.12
-
6
-
-
0031280508
-
Thermophilic proteins: Stability and function in aqueous and organic solvents
-
Cowan, D. A. Thermophilic proteins: Stability and function in aqueous and organic solvents. Comp. Biochem. Physiol., Part A: Mol. Integr. Physiol. 1997, 118, 429-438.
-
(1997)
Comp. Biochem. Physiol., Part A: Mol. Integr. Physiol.
, vol.118
, pp. 429-438
-
-
Cowan, D.A.1
-
7
-
-
0032438190
-
The stability of proteins in extreme environments
-
1998
-
Jaenicke, R.; Bohm, G. 1998, The stability of proteins in extreme environments. Curr. Opin. Struct. Biol. 1998, 8, 738-748.
-
(1998)
Curr. Opin. Struct. Biol.
, vol.8
, pp. 738-748
-
-
Jaenicke, R.1
Bohm, G.2
-
8
-
-
84986432905
-
Accurate modeling of the intramolecular electrostatic energy of proteins
-
Dudek, M. J.; Ponder, J. W. Accurate modeling of the intramolecular electrostatic energy of proteins. J. Comput. Chem. 1995, 16, 791-816.
-
(1995)
J. Comput. Chem.
, vol.16
, pp. 791-816
-
-
Dudek, M.J.1
Ponder, J.W.2
-
9
-
-
84986533794
-
Algorithms for calculating excluded volume and its derivatives as a function of molecular conformation and their use in energy minimization
-
Kundrot, C. E.; Ponder, J. W.; Richards, F. M. Algorithms for calculating excluded volume and its derivatives as a function of molecular conformation and their use in energy minimization. J. Comput. Chem. 1991, 12, 402-409.
-
(1991)
J. Comput. Chem.
, vol.12
, pp. 402-409
-
-
Kundrot, C.E.1
Ponder, J.W.2
Richards, F.M.3
-
10
-
-
84988112508
-
An efficient Newton-like method for molecular mechanics energy minimization of large molecules
-
Ponder, J. W.; Richards, F. M. An efficient Newton-like method for molecular mechanics energy minimization of large molecules. J. Comput. Chem. 1987, 8, 1016.
-
(1987)
J. Comput. Chem.
, vol.8
, pp. 1016
-
-
Ponder, J.W.1
Richards, F.M.2
-
11
-
-
14844346946
-
Intraresidue distribution of energy in proteins
-
Trebbi, B.; Fanti, M.; Rossi, I.; Zerbetto, F. Intraresidue distribution of energy in proteins. J. Phys. Chem. B 2005, 109, 3586-3593.
-
(2005)
J. Phys. Chem. B
, vol.109
, pp. 3586-3593
-
-
Trebbi, B.1
Fanti, M.2
Rossi, I.3
Zerbetto, F.4
-
12
-
-
0037116503
-
The effect of mechanical interlocking on crystal packing, predictions and testing
-
Biscarini, F.; Cavallini, M.; Leigh, D. A.; León, S.; Teat, S. J.; Wong, J. K. W.; Zerbetto. F. The effect of mechanical interlocking on crystal packing, predictions and testing. J. Am. Chem. Soc. 2002, 124, 225-233.
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 225-233
-
-
Biscarini, F.1
Cavallini, M.2
Leigh, D.A.3
León, S.4
Teat, S.J.5
Wong, J.K.W.6
Zerbetto, F.7
-
13
-
-
0842341831
-
The effect of guest inclusion on the crystal packing of p-tert-butylcalix[4]arenas
-
León, S.; Leigh, D. A.; Zerbetto, F. The effect of guest inclusion on the crystal packing of p-tert-butylcalix[4]arenas. Chem.-Eur. J. 2002, 8, 4854-4866.
-
(2002)
Chem.-Eur. J.
, vol.8
, pp. 4854-4866
-
-
León, S.1
Leigh, D.A.2
Zerbetto, F.3
-
14
-
-
0037455133
-
On the cavitation energy of water
-
Höfinger, S.; Zerbetto, F. On the cavitation energy of water. Chem.-Eur. J. 2003, 9, 566-569.
-
(2003)
Chem.-Eur. J.
, vol.9
, pp. 566-569
-
-
Höfinger, S.1
Zerbetto, F.2
-
15
-
-
0038111016
-
Molecular dynamics and implications for the photophysics of a dendrimer-dye guest-host system
-
Teobaldi, G.; Zerbetto, F. Molecular dynamics and implications for the photophysics of a dendrimer-dye guest-host system. J. Am. Chem. Soc. 2003, 125, 7388-7393.
-
(2003)
J. Am. Chem. Soc.
, vol.125
, pp. 7388-7393
-
-
Teobaldi, G.1
Zerbetto, F.2
-
16
-
-
0021757436
-
A new force field for molecular mechanical simulation of nucleic acids and proteins
-
Weiner, S. J.; Kollman, P. A.; Case, D. A.; Singh, U. C.; Ghio, C.; Alagona, G.; Profeta, S., Jr; Weiner, P. A new force field for molecular mechanical simulation of nucleic acids and proteins. J. Am. Chem. Soc. 1984, 106, 765-784.
-
(1984)
J. Am. Chem. Soc.
, vol.106
, pp. 765-784
-
-
Weiner, S.J.1
Kollman, P.A.2
Case, D.A.3
Singh, U.C.4
Ghio, C.5
Alagona, G.6
Profeta Jr., S.7
Weiner, P.8
-
17
-
-
84986525856
-
A comprehensive study of the rotational energy profiles of organic systems by ab initio MO theory, forming a basis for peptide torsional parameters
-
Maxwell, D. S.; Tirado-Rives, J.; Jorgensen, W. L. A comprehensive study of the rotational energy profiles of organic systems by ab initio MO theory, forming a basis for peptide torsional parameters. J. Comput. Chem. 1985, 16, 984-1010.
-
(1985)
J. Comput. Chem.
, vol.16
, pp. 984-1010
-
-
Maxwell, D.S.1
Tirado-Rives, J.2
Jorgensen, W.L.3
-
18
-
-
0001351515
-
Estimation of absolute and relative entropies of macromolecules using the covariance matrix
-
Schlitter, J. Estimation of absolute and relative entropies of macromolecules using the covariance matrix. Chem. Phys. Lett. 1993, 215, 617-621.
-
(1993)
Chem. Phys. Lett.
, vol.215
, pp. 617-621
-
-
Schlitter, J.1
-
19
-
-
0034323089
-
Absolute entropies from molecular dynamics simulation trajectories
-
Schäfer, H.; Mark, A. E.; van Gunsteren, W. F. Absolute entropies from molecular dynamics simulation trajectories. J. Chem. Phys. 2000, 113, 7809-7817.
-
(2000)
J. Chem. Phys.
, vol.113
, pp. 7809-7817
-
-
Schäfer, H.1
Mark, A.E.2
Van Gunsteren, W.F.3
-
20
-
-
0035314075
-
Entropy calculations on a reversibly folding peptide: Changes in solute free energy cannot explain folding behavior
-
Schäfer, H.; Daura, X.; Mark, A. E.; van Gunsteren, W. F. Entropy calculations on a reversibly folding peptide: Changes in solute free energy cannot explain folding behavior. Proteins: Struct., Funct., Genet. 2001, 43, 45-56.
-
(2001)
Proteins: Struct., Funct., Genet.
, vol.43
, pp. 45-56
-
-
Schäfer, H.1
Daura, X.2
Mark, A.E.3
Van Gunsteren, W.F.4
-
21
-
-
0036463713
-
Increased frequency of cysteine, tyrosine, and phenylalanine residues since the last universal ancestor
-
Brooks, D. J.; Fresco, J. R. Increased frequency of cysteine, tyrosine, and phenylalanine residues since the last universal ancestor. Mol. Cell. Proteomics 2002, 1, 125-131.
-
(2002)
Mol. Cell. Proteomics
, vol.1
, pp. 125-131
-
-
Brooks, D.J.1
Fresco, J.R.2
|