High-level expression and characterization of Zea mays cytokinin oxidase/dehydrogenase in Yarrowia lipolytica

Biochimie

Volumn 87, Issue 11, 2005, Pages 1011-1022

  Kopečný, David ^a,b   Pethe, Claude ^a   Šebela, Marek ^b   Houba Hérin, Nicole ^b   Madzak, Catherine ^c   Majira, Amel ^a   Laloue, Michel ^a  

^a CEMAGREF   (France)

^b PALACKÝ UNIVERSITY   (Czech Republic)

^c CNRS   (France)

Author keywords

Cytokinin oxidase dehydrogenase; Hydrogen peroxide; Maize; Protein expression and purification; Yarrowia lipolytica

Indexed keywords

6 N (3,3 DIMETHYLALLYL)ADENINE; 6 N (3,3 DIMETHYLALLYL)ADENOSINE; ADENINE DERIVATIVE; COMPLEMENTARY DNA; CYTOKININ; CYTOKININ DEHYDROGENASE; CYTOKININ OXIDASE; FLAVINE ADENINE NUCLEOTIDE; FLAVOPROTEIN; HYDROGEN PEROXIDE; OXYGEN; PEPTIDE; PROTEIN; RECOMBINANT ENZYME; SUGAR; UNCLASSIFIED DRUG; ZEATIN; ZEATIN DERIVATIVE; ZEATIN RIBOSIDE;

ABSORPTION; ARTICLE; CATALYSIS; CHROMATOGRAPHY; CONTROLLED STUDY; DATA BASE; ELECTRON; ENZYME PURIFICATION; ENZYME STABILITY; ENZYME SUBSTRATE; FLUORESCENCE SPECTROSCOPY; INCUBATION TEMPERATURE; INCUBATION TIME; KINETICS; MAIZE; MASS SPECTROMETRY; MOLECULAR CLONING; MOLECULAR WEIGHT; MOLECULE; NONHUMAN; NUCLEOTIDE SEQUENCE; PH; PROTEIN EXPRESSION; PROTEIN FUNCTION; THERMOSTABILITY; YARROWIA LIPOLYTICA; YEAST;

AMINO ACID SEQUENCE; CHROMATOGRAPHY, GEL; CLONING, MOLECULAR; HYDROGEN PEROXIDE; ISOELECTRIC POINT; KINETICS; MOLECULAR SEQUENCE DATA; MOLECULAR WEIGHT; OXIDOREDUCTASES; PEPTIDE MAPPING; RECOMBINANT PROTEINS; SPECTROMETRY, FLUORESCENCE; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; SPECTROPHOTOMETRY, ULTRAVIOLET; YARROWIA; ZEA MAYS;

YARROWIA LIPOLYTICA; ZEA MAYS;

EID: 25444499704     PISSN: 03009084     EISSN: 61831638     Source Type: Journal    
DOI: 10.1016/j.biochi.2005.04.006     Document Type: Article

References (39)

1. C.D. Whitty, and R.H. Hall A cytokinin oxidase in Zea mays Can. J. Biochem. 52 1974 789 799
2. R.O. Morris, K.D. Bilyeu, J.G. Laskey, and N.N. Cheikh Isolation of a gene encoding a glycosylated cytokinin oxidase from maize Biochem. Biophys. Res. Commun. 255 1999 328 333
3. N. Houba-H́rin, C. Pethe, J. d'Alayer, and M. Laloue Cytokinin oxidase from Zea mays: purification, cDNA cloning and expression in moss protoplasts Plant J. 17 1999 615 626
4. A. Massonneau, N. Houba-H́rin, C. Pethe, C. Madzak, M. Falque, M. Mercy, D. Kopečný, A. Majira, P. Rogowsky, and M. Laloue Maize cytokinin oxidase genes: differential expression and cloning of two new cDNAs J. Exp. Bot. 55 2004 2549 2557
5. K.D. Bilyeu, J.L. Cole, J.G. Laskey, W.R. Riekhof, T.J. Esparza, M.D. Kramer, and R.O. Morris Molecular and biochemical characterization of a cytokinin oxidase from maize Plant Physiol. 125 2001 378 386
6. E. Malito, A. Coda, K.D. Bilyeu, M.W. Fraaije, and A. Mattevi Structures of Michaelis and product complexes of plant cytokinin dehydrogenase: implications for flavoenzyme catalysis J. Mol. Biol. 341 2004 1237 1249
7. D.J. Armstrong Cytokinin oxidase and regulation of cytokinin degradation D.W.S. Mok M.C. Mok Cytokinins: Chemistry, Activity and Function 1994 CRC Press Boca Raton 139 154
8. M. Laloue, and J.E. Fox Cytokinin oxidase from wheat. Partial purification and general properties Plant Physiol. 90 1989 899 906
9. I. Fŕbort, P. Galuszka, M. Šebela, M. Strnad, and P. Peč Cytokinin oxidase (or cytokinin dehydrogenase?) from wheat: purification, characterization and evidence for dehydrogenase mechanism of the enzyme reaction Biol. Plant. Suppl. 42 1999 S119
10. P. Galuszka, I. Fŕbort, M. Šebela, P. Sauer, S. Jacobsen, and P. Peč Cytokinin oxidase or dehydrogenase? Mechanism of the cytokinin degradation in plants Eur. J. Biochem. 268 2001 450 461
11. J.G. Laskey, P. Patterson, K. Bilyeu, and R.O. Morris Rate enhancement of cytokinin oxidase/dehydrogenase using 2,6-dichloroindophenol as an electron acceptor Plant Growth Regul. 40 2003 189 196
12. B.G. Brownlee, R.H. Hall, and C.D. Whitty 3-Methyl-2-butenal: an enzymatic degradation product of the cytokinin, N-6-(delta-2 isopentenyl) adenine Can. J. Biochem. 53 1975 37 41
13. M. Laloue, and J.E. Fox Characterization of an imine intermediate in the degradation of isopentenylated cytokinins by a cytokinin oxidase from wheat M. Bopp Abstracts of the 12th International Conference on Plant Growth Substances 1985 Springer-Verlag Berlin 23
14. J. Fŕbortová, M.W. Fraaije, P. Galuszka, M. Šebela, P. Peč, J. Hrbáč, O. Novák, K.D. Bilyeu, J.T. English, and I. Fŕbort Catalytic reaction of cytokinin dehydrogenase: preference for quinones as electron acceptors Biochem. J. 380 2004 121 130
15. D. Kopečný, P. Briozzo, N. Joly, N. Houba-H́rin, C. Madzak, C. Pethe, and M. Laloue Purification, crystallization and preliminary X-ray diffraction study of a recombinant cytokinin oxidase from Zea mays Acta Crystallogr. Sect. D-Biol. Crystallogr. 60 2004 1500 1501
16. C. Madzak, B. Tŕton, and S. Blanchin-Roland Strong hybrid promoters and integrative expression/secretion vectors for quasi-constitutive expression of heterologous proteins in the yeast Yarrowia lipolytica J. Mol. Microbiol. Biotechnol. 2 2000 207 216
17. J.W. Xuan, P. Fournier, and C. Gaillardin Cloning of the LYS5 gene encoding saccharopine dehydrogenase from the yeast Yarrowia lipolytica by target integration Curr. Genet. 14 1988 15 21
18. I. Fŕbort, M. Šebela, P. Galuszka, T. Werner, T. Schmülling, and P. Peč Cytokinin oxidase/cytokinin dehydrogenase assay: optimized procedures and applications Anal. Biochem. 306 2002 1 7
19. P.K. Smith, R.I. Krohn, G.T. Hermanson, A.K. Mallia, F.H. Gartner, M.D. Provenzano, E.K. Fujimoto, N.M. Goeke, B.J. Olson, and D.C. Klenk Measurement of protein using bicinchoninic acid Anal. Biochem. 150 1985 76 85
20. U.K. Laemmli Cleavage of structural proteins during the assembly of the head of bacteriophage T4 Nature 227 1970 650 685
21. H. Blum, H. Beier, and H.J. Gross Improved silver staining of plant proteins, RNA and DNA in polyacrylamide gels Electrophoresis 8 1987 93 99
22. M. Dubois, K.A. Gilles, J.K. Hamilton, P.A. Rebers, and F. Smith Colorimetric method for determination of sugars and related substances Anal. Chem. 28 1956 350 356
23. T. Tai, K. Yamashita, M. Ogata-Arakawa, N. Koide, T. Muramatsu, S. Iwashita, Y. Inoue, and A. Kobata Structural studies of two ovalbumin glycopeptides in relation to the endo-beta-N-acetylglucosaminidase specificity J. Biol. Chem. 250 1975 8569 8575
24. G.G. Guilbault, P. Brignac Jr., and M. Zimmer Homovanillic acid as a fluorometric substrate for oxidative enzymes. Analytical applications of the peroxidase, glucose oxidase, and xanthine oxidase systems Anal. Chem. 40 1968 190 196
25. J. Havliš, H. Thomas, M. Šebela, and A. Shevchenko Fast-response proteomics by accelerated in-gel digestion of proteins Anal. Chem. 75 2003 1300 1306
26. A. Shevchenko, M. Wilm, O. Vorm, and M. Mann Mass spectrometric sequencing of proteins from silver stained polyacrylamide gels Anal. Chem. 68 1996 850 858
27. C.S. Park, C.C. Chang, J.Y. Kim, D.M. Ogrydziak, and D.D. Ryu Expression, secretion, and processing of rice α-amylase in the yeast Yarrowia lipolytica J. Biol. Chem. 272 1997 6876 6881
28. J.M. Nicaud, C. Madzak, P. Van den Broek, C. Gysler, P. Duboc, P. Niederberger, and C. Gaillardin Protein expression and secretion in the yeast Yarrowia lipolytica FEMS Yeast Res. 2 2002 371 379
29. C. Jolivalt, C. Madzak, A. Brault, E. Caminade, C. Malosse, and C. Mougin Expression of laccase IIIb from the white-rot fungus Trametes versicolor in the yeast Yarrowia lipolytica for environmental applications Appl. Microbiol. Biotechnol. 66 2005 450 456
30. C. Madzak, L. Otterbein, M. Chamkha, S. Moukha, M. Asther, C. Gaillardin, and J.M. Beckerich Heterologous production of a laccase from the basidiomycete Pycnoporus cinnabarinus in the dimorphic yeast Yarrowia lipolytica FEMS Yeast Res. 5 2005 635 646
31. L.S. Grinna, and J.F. Tschopp Size distribution and general structural features of N-linked oligosaccharides from the methylotrophic yeast Pichia pastoris Yeast 5 1989 107 115
32. G. Gellissen, and C.P. Hollenberg Application of yeasts in gene expression studies: a comparison of Saccharomyces cerevisiae, Hansenula polymorpha and Kluyveromyces lactis - a review Gene 190 1997 87 97
33. A.W. Munro, and M.A. Noble Fluorescence analysis of flavoproteins Methods Mol. Biol. 131 1999 25 48
34. J.H. Pazur Glucose oxidase from Aspergillus niger Methods Enzymol. 8 1966 82 87
35. A. Radová, M. Šebela, P. Galuszka, I. Fŕbort, S. Jacobsen, H.G. Faulhammer, and P. Peč Barley polyamine oxidase: characterization and analysis of the cofactor and the N-terminal amino acid sequence Phytochem. Anal. 12 2001 166 173
36. R. Federico, R. Angelini, A. Cona, and A. Niglio Polyamine oxidase bound to cell-walls from Zea mays seedlings Phytochemistry 31 1992 2955 2957
37. T. Nishino, and K. Okamoto The role of the 2Fe-2S cluster centers in xanthine oxidoreductase J. Inorg. Biochem. 82 2000 43 49
38. W. Bao, S.N. Usha, and V. Renganathan Purification and characterization of cellobiose dehydrogenase, a novel extracellular hemoflavoenzyme from the white-rot fungus Phanerochoaete chrysosporium Arch. Biochem. Biophys. 300 1993 705 713
39. Y.J. Jong, M.J. Nelson, and E.E. Snell Enzymes of vitamin B6 degradation. Purification and properties of pyridoxine 5′-dehydrogenase (oxidase) J. Biol. Chem. 261 1986 15102 15105