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Volumn 6, Issue , 2005, Pages

Quality assessment of microarrays: Visualization of spatial artifacts and quantitation of regional biases

Author keywords

[No Author keywords available]

Indexed keywords

AFFYMETRIX CHIP; CURRENT PRACTICES; EXPRESSION MEASUREMENTS; GENE EXPRESSION MICROARRAY; INTENSITY SCALE; QUALITY ASSESSMENT; SINGLE PARAMETER; STATISTICAL INDICES;

EID: 25444444696     PISSN: 14712105     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-6-166     Document Type: Article
Times cited : (41)

References (12)
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    • Li, C.1    Wong, W.H.2
  • 3
    • 0041592552 scopus 로고    scopus 로고
    • Quantitative quality control in microarray experiments and the application in data filtering, normalization and false positive rate prediction
    • Wang X, Hessner MJ, Wu Y, Pati N, Ghosh S: Quantitative quality control in microarray experiments and the application in data filtering, normalization and false positive rate prediction. Bioinformatics 2003, 19:1341-1347.
    • (2003) Bioinformatics , vol.19 , pp. 1341-1347
    • Wang, X.1    Hessner, M.J.2    Wu, Y.3    Pati, N.4    Ghosh, S.5
  • 5
    • 1342288026 scopus 로고    scopus 로고
    • affy - Analysis of Affymetrix GeneChip data at the probe level
    • Gautier L, Cope L, Bolstad BM, Irizarry RA: affy - analysis of Affymetrix GeneChip data at the probe level. Bioinformatics 2004, 20:307-315.
    • (2004) Bioinformatics , vol.20 , pp. 307-315
    • Gautier, L.1    Cope, L.2    Bolstad, B.M.3    Irizarry, R.A.4
  • 6
    • 0041660936 scopus 로고    scopus 로고
    • Spurious spatial periodicity of co-expression in microarray data due to printing design
    • Balazsi G, Kay KA, Barabasi AL, Oltvai ZN: Spurious spatial periodicity of co-expression in microarray data due to printing design. Nucleic Acids Res 2003, 31:4425-4433.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 4425-4433
    • Balazsi, G.1    Kay, K.A.2    Barabasi, A.L.3    Oltvai, Z.N.4
  • 7
    • 0036855423 scopus 로고    scopus 로고
    • SNOMAD (Standardization and NOrmalization of MicroArray Data): Web-accessible gene expression data analysis
    • Colantuoni C, Henry G, Zeger S, Pevsner J: SNOMAD (Standardization and NOrmalization of MicroArray Data): web-accessible gene expression data analysis. Bioinformatics 2002, 18:1540-1541.
    • (2002) Bioinformatics , vol.18 , pp. 1540-1541
    • Colantuoni, C.1    Henry, G.2    Zeger, S.3    Pevsner, J.4
  • 9
    • 0038002409 scopus 로고    scopus 로고
    • Identification and correction of spurious spatial correlations in microarray data
    • 46 48
    • Qian J, Kluger Y, Yu H, Gerstein M: Identification and correction of spurious spatial correlations in microarray data. Biotechniques 2003, 35:42-4, 46, 48.
    • (2003) Biotechniques , vol.35 , pp. 42-44
    • Qian, J.1    Kluger, Y.2    Yu, H.3    Gerstein, M.4
  • 10
    • 84885690446 scopus 로고    scopus 로고
    • Print-order normalization of cDNA microarrays
    • Smyth GK: Print-order normalization of cDNA microarrays. [http://www.statsci.org/smyth/pubs/porder/porder.html].
    • Smyth, G.K.1
  • 11
    • 84855199947 scopus 로고    scopus 로고
    • A language and environment for statistical computing
    • R Development Core Team: R Foundation for Statistical Computing, Vienna
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* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.