Functional interaction between RNase III and the Escherichia coli ribosome

BMC Molecular Biology

Volumn 4, Issue , 2003, Pages

  Allas, Üllar ^a   Liiv, Alivar ^b   Remme, Jaanus ^a  

^a UNIVERSITY OF TARTU   (Estonia)

^b UNIVERSITY OF TARTU   (Estonia)

Author keywords

[No Author keywords available]

Indexed keywords

DOUBLE STRANDED RNA; MESSENGER RNA; RIBONUCLEASE III; RIBOSOME RNA;

ARTICLE; BACTERIAL STRAIN; BINDING AFFINITY; CONTROLLED STUDY; ENZYME PURIFICATION; ESCHERICHIA COLI; GENE MAPPING; IN VITRO STUDY; MOLECULAR INTERACTION; NONHUMAN; PROTEIN RNA BINDING; RIBOSOME; RIBOSOME SUBUNIT; RNA CLEAVAGE; RNA PROCESSING; RNA SEQUENCE; RNA STRUCTURE; RNA TRANSCRIPTION;

ESCHERICHIA COLI;

EID: 2542487488     PISSN: 14712199     EISSN: None     Source Type: Journal    
DOI: 10.1186/1471-2199-4-8     Document Type: Article

References (24)

1. Srivastava AK and Schlessinger D: Mechanism and regulation of bacterial ribosomal RNA processing Annu Rev Microbiol 1990, 44:105-129.
2. Nicholson AW: Function, mechanism and regulation of bacterial ribonucleases FEMS Microbiol Rev 1999, 23:371-390.
3. Rotondo G and Frendewey D: Purification and characterization of the Pac1 ribonuclease of Schizosaccharomyces pombe Nucleic Acids Res 1996, 24:2377-2386.
4. Wu H, Xu H, Miraglia LJ and Crooke ST: Human RNase III is a 160-kDa protein involved in preribosomal RNA processing J Biol Chem 2000, 275:36957-36965.
5. Nashimoto H and Uchida H: DNA sequencing of the Escherichia coli ribonuclease III gene and its mutations Mol Gen Genet 1985, 201:25-29.
6. Robertson HD, Webster RE and Zinder ND: Purification and properties of ribonuclease III from Escherichia coli J Biol Chem 1968, 243:82-91.
7. Dunn JJ: RNase III cleavage of single-stranded RNA. Effect of ionic strength on the fideltiy of cleavage J Biol Chem 1976, 251:3807-3814.
8. Dunn JJ: Ribonuclease III The Enzymes Volume 15. Edited by: Boyer PD. New York, Academic Press; 1982485-499.
9. Bram RJ, Young RA and Steitz JA: The ribonuclease III site flanking 23S sequences in the 30S ribosomal precursor RNA of E. coli Cell 1980, 19:393-401.
10. Nikolaev N, Schlessinger D and Wellauer PK: 30 S pre-ribosomal RNA of Escherichia coli and products of cleavage by ribonuclease III: length and molecular weight J Mol Biol 1974, 86:741-747.
11. Apirion D and Gegenheimer P: Molecular biology of RNA processing in procaryotic cells In: Processing of RNA Boca Raton Fla: CRC Press; 1984:36-52.
12. King TC and Schlessinger D: S1 nuclease mapping analysis of ribosomal RNA processing in wild type and processing deficient Escherichia coli. J Biol Chem 1983, 258:12034-12042.
13. Gegenheimer P, Watson N and Apirion D: Multiple pathways for primary processing of ribosomal RNA in Escherichia coli J Biol Chem 1977, 252:3064-3073.
14. Sirdeshmukh R and Schlessinger D: Ordered processing of Escherichia coli 23S rRNA in vitro Nucleic Acids Res 1985, 13:5041-5054.
15. Liiv A and Remme J: Base-pairing of 23 S rRNA ends is essential for ribosomal large subunit assembly J Mol Biol 1998, 276:537-45.
16. King TC, Sirdeshmukh R and Schlessinger D: RNase III cleavage is obligate for maturation but not for function of Escherichia coli pre-23S rRNA Proc Natl Acad Sci USA 1984, 81:185-188.
17. Li Z, Pandit S and Deutscher MP: Maturation of 23S ribosomal RNA requires the exoribonuclease RNase T RNA 1999, 5:139-146.
18. Nashimoto H, Miura A, Saito H and Uchida H: Suppression of temperature-sensitive mutations in ribosomal protein gene, rpsl (S12), of Escherichia coli K12 Mol Gen Genet 1985, 199:381-387.
19. Lewicki BT, Margus T, Remme J and Nierhaus KH: Coupling of rRNA transcription and ribosomal assembly in vivo. Formation of active ribosomal subunits in Escherichia coli requires transcription of rRNA genes by host RNA polymerase which cannot be replaced by bacteriophage T7 RNA polymerase J Mol Biol 1993, 231:581-593.
20. Robertson HD, Webster RE and Zinder ND: Purification and properties of ribonuclease III from Escherichia coli. J Biol Chem 1968, 243:82-91.
21. Kharrat A, Macias MJ, Gibson TJ, Nilges M and Pastore A: Structure of the dsRNA binding domain of E. coli RNase III EMBO J 1995, 14:3572-3584.
22. Wilson HR, Yu D, Peters HK 3rd, Zhou JG and Court DL: The global regulator RNase III modulates translation repression by the transcription elongation factor N EMBO J 2002, 21:4154-4161.
23. Gregory ST, O'Connor M and Dahlberg AE: Functional Escherichia coli 23S rRNAs containing processed and unprocessed intervening sequences from Salmonella typhimurium Nucleic Acids Res 1996, 24:4918-4923.
24. Brosius J, Dull TJ and Noller HF: Complete nucleotide sequence of a 23S ribosomal RNA gene from Escherichia coli. Proc Natl Acad Sci USA 1980, 77:201-204.