Expansion during primate radiation of a variable number tandem repeat in the coding region of the circadian clock gene Period3

Journal of Biological Rhythms

Volumn 20, Issue 5, 2005, Pages 470-472

  Jenkins, Aaron ^a   Archer, Simon N ^a   Von Schantz, Malcolm ^a  

^a UNIVERSITY OF SURREY   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

CARBOXYL ESTER LIPASE; DNA POLYMERASE; DOPAMINE 4 RECEPTOR; GLYCOPROTEIN IB ALPHA; RNA; TRIACYLGLYCEROL LIPASE; UNCLASSIFIED DRUG;

ALLELE; AMINO ACID SEQUENCE; ANIMAL TISSUE; CIRCADIAN CLOCK GENE; CIRCADIAN RHYTHM; GENE; GENE FUNCTION; GENETIC CONSERVATION; GENETIC POLYMORPHISM; GENETIC VARIABILITY; GIBBON; GORILLA; LANGUR; LETTER; MARMOSET; MOLECULAR CLOCK; MOUSE; NIGHT; NONHUMAN; NUCLEOTIDE REPEAT; NUCLEOTIDE SEQUENCE; PHENOTYPE; PHYLOGENY; POLYMERASE CHAIN REACTION; PRIMATE; PRIORITY JOURNAL; RAT; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS; SLEEP WAKING CYCLE; VARIABLE NUMBER OF TANDEM REPEAT;

AMINO ACID SEQUENCE; ANIMALS; BIOLOGICAL CLOCKS; CIRCADIAN RHYTHM; HUMANS; MINISATELLITE REPEATS; MOLECULAR SEQUENCE DATA; NUCLEAR PROTEINS; PRIMATES; SEQUENCE ALIGNMENT; TRANSCRIPTION FACTORS;

ANIMALIA; HYLOBATES SP.; MARMOSETS; PRIMATES;

EID: 24944577465     PISSN: 07487304     EISSN: None     Source Type: Journal    
DOI: 10.1177/0748730405278442     Document Type: Letter

References (11)

1. Archer SN, Robilliard D, Skene DJ, Smits MG, Williams A, Arendt J, and von Schantz M (2003) A length polymorphism in the circadian clock gene Per3 is linked to delayed sleep phase syndrome and extreme diurnal preference. Sleep 26:413-415.
2. Bae K, Jin X, Maywood ES, Hastings MH, Reppert SM, and Weaver DR (2001) Differential functions of mPer1, mPer2, and mPer3 in the SCN circadian clock. Neuron 30:525-536.
3. Ebisawa T, Uchiyama M, Kajimura N, Mishima K, Kamei Y, Katoh M, Watanabe T, Sekimoto M, Shibui K, Kim K, et al. (2001) Association of structural polymorphisms in the human period3 gene with delayed sleep phase syndrome. EMBO Rep 2:342-346.
4. Higuchi S, Nakamura Y, and Saito S (2002) Characterization of a VNTR polymorphism in the coding region of the CEL gene. J Hum Genet 47:213-215.
5. Livak KJ, Rogers J, and Lichter JB (1995) Variability of dopamine D4 receptor (DRD4) gene sequence within and among nonhuman primate species. Proc Natl Acad Sci USA 92:427-431.
6. Lopez JA, Ludwig EH, and McCarthy BJ (1992) Polymorphism of human glycoprotein Ib alpha results from a variable number of tandem repeats of a 13-amino acid sequence in the mucin-like macroglycopeptide region: Structure/function implications. J Biol Chem 267:10055-10061.
7. Pereira DS, Tufik S, Louzada FM, Benedito-Silva AA, Lopez AR, Lemos NA, Korczak AL, D'Ameida V, and Pedrazzoli M (2005) Association of the length polymorphism in the human Per3 gene with the delayed sleep-phase syndrome: Does latitude have an influence upon it? Sleep 28:29-32.
8. Shearman LP, Jin X, Lee C, Reppert SM, and Weaver DR (2000) Targeted disruption of the mPer3 gene: Subtle, effects on circadian clock function. Mol Cell Biol 20:6269-6275.
9. Tauber E, Last KS, Olive PJ, and Kyriacou CP (2004) Clock gene evolution and functional divergence. J Biol Rhythms 19:445-458.
10. Van Tol HH, Wu CM, Guan HC, Ohara K, Bunzow JR, Civelli O, Kennedy J, Seeman P, Niznik HB, and Jovanovic V (1992) Multiple dopamine D4 receptor variants in the human population. Nature 358:149-152.
11. Zhu Y, Brown HN, Zhang Y, Stevens RG, and Zheng T (2005) Period3 structural variation: A circadian biomarker associated with breast cancer in young women. Cancer Epidemiol Biomarkers Prev 14:268-270.