LexA, a transcription regulator binding in the promoter region of the bidirectional hydrogenase in the cyanobacterium Synechocystis sp. PCC 6803

FEMS Microbiology Letters

Volumn 251, Issue 1, 2005, Pages 59-66

  Oliveira, Paulo ^a   Lindblad, Peter ^a  

^a UPPSALA UNIVERSITY   (Sweden)

Author keywords

Bidirectional hydrogenase; hox; LexA; Synechocystis; Transcription regulator

Indexed keywords

HYDROGENASE; LEXA PROTEIN;

ARTICLE; DNA PROTEIN COMPLEX; GENETIC TRANSCRIPTION; HOX GENE; MASS SPECTROMETRY; NONHUMAN; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN DNA INTERACTION; SYNECHOCYSTIS; TRANSCRIPTION INITIATION SITE; TRANSCRIPTION REGULATION;

AMINO ACID SEQUENCE; BACTERIAL PROTEINS; BASE SEQUENCE; DNA, BACTERIAL; ELECTROPHORETIC MOBILITY SHIFT ASSAY; GENES, BACTERIAL; HYDROGENASE; MOLECULAR SEQUENCE DATA; OPERON; PROMOTER REGIONS (GENETICS); PROTEIN BINDING; SEQUENCE ALIGNMENT; SERINE ENDOPEPTIDASES; SYNECHOCYSTIS; TRANSCRIPTION INITIATION SITE;

SYNECHOCYSTIS; SYNECHOCYSTIS SP.; SYNECHOCYSTIS SP. PCC 6803;

EID: 24944525933     PISSN: 03781097     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.femsle.2005.07.024     Document Type: Article

References (28)

1. P. Tamagnini, R. Axelsson, P. Lindberg, F. Oxelfelt, R. Wünschiers, and P. Lindblad Hydrogenases and hydrogen metabolism of cyanobacteria Microbiol. Mol. Biol. Rev. 66 2002 1 20
2. 2 production - a comparative analysis Planta 218 2004 350 359
3. J. Appel, and R. Schulz Sequence analysis of an operon of a NAD(P)-reducing nickel hydrogenase from the cyanobacterium Synechocystis sp. PCC 6803 gives additional evidence for direct coupling of the enzyme to NAD(P)H-dehydrogenase (complex I) Biochim. Biophys. Acta 1298 1996 141 147
4. T. Kaneko, S. Sato, H. Kotani, A. Tanaka, E. Asamizu, Y. Nakamura, N. Miyajima, M. Hirosawa, M. Sugiura, S. Sasamoto, T. Kimura, T. Hosouchi, A. Matsuno, A. Muraki, N. Nakazaki, K. Naruo, S. Okumura, S. Shimpo, C. Takeuchi, T. Wada, A. Watanabe, M. Yamada, M. Yasuda, and S. Tabata Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803 DNA Res. 30 1996 185 209
5. O. Schmitz, G. Boison, H. Salzmann, H. Bothe, K. Schütz, S.H. Wang, and T. Happe HoxE - a subunit specific for the pentameric bidirectional hydrogenase complex (HoxEFUYH) of cyanobacteria Biochim. Biophys. Acta 1554 2002 66 74
6. 2 by sulphur-deprived cells of the unicellular cyanobacteria Gloeocapsa alpicola and Synechocystis sp. PCC 6803 during dark incubation with methane or at various extracellular pH J. Appl. Microbiol. 98 2005 114 120
7. J. Appel, S. Phunpruch, K. Steinmuller, and R. Schulz The bidirectional hydrogenase of Synechocystis sp. PCC 6803 works as an electron valve during photosynthesis Arch. Microbiol. 173 2000 333 338
8. +-reducing NiFe hydrogenase in the purple sulfur photosynthetic bacterium Thiocapsa roseopersicina Appl. Environ. Microbiol. 70 2004 722 728
9. O. Schmitz, G. Boison, and H. Bothe Quantitative analysis of expression of two circadian clock-controlled gene clusters coding for the bidirectional hydrogenase in the cyanobacterium Synechococcus sp. PCC7942 Mol. Microbiol. 41 2001 1409 1417
10. G. Boison, H. Bothe, and O. Schmitz Transcriptional analysis of hydrogenase genes in the cyanobacteria Anacystis nidulans and Anabaena variabilis monitored by RT-PCR Curr. Microbiol. 40 2000 315 321
11. F. Oxelfelt, P. Tamagnini, R. Salema, and P. Lindblad Hydrogen uptake in Nostoc strain PCC 73102: effects of nickel, hydrogen, carbon and nitrogen Plant Physiol. Biochem. 33 1995 617 623
12. R. Axelsson, and P. Lindblad Transcriptional regulation of Nostoc hydrogenases: effects of oxygen, hydrogen, and nickel Appl. Environ. Microbiol. 68 2002 444 447
13. M.E. Sheremetieva, O. Troshina, L.T. Serebryakova, and P. Lindblad Identification of hox genes and analysis of their transcription in the unicellular cyanobacterium Gloeocapsa alpicola CALU 743 growing under nitrate-limiting conditions FEMS Microbiol. Lett. 214 2002 229 233
14. P. Oliveira, E. Leitão, P. Tamagnini, P. Moradas-Ferreira, and F. Oxelfelt Characterization and transcriptional analysis of hupSLW in Gloeothece sp. ATCC 27152: an uptake hydrogenase from a unicellular cyanobacterium Microbiology 150 2004 3647 3655
15. Lindberg, P. (2003) Cyanobacterial hydrogen metabolism - uptake hydrogenase and hydrogen production by nitrogenase in filamentous cyanobacteria. PhD thesis. Uppsala University, Uppsala, Sweden. ISBN 91-554-5708-8.
16. K. Kucho, K. Okamoto, Y. Tsuchiya, S. Nomura, M. Nango, M. Kanehisa, and M. Ishiura Global analysis of circadian expression in the cyanobacterium Synechocystis sp. strain PCC 6803 J. Bacteriol. 187 2005 2190 2199
17. R.Y. Stanier, P. Kunisawa, M. Mandel, and G. Cohen-Bazire Purification and properties of unicellular blue-gree algae (order Chrococcales) Bacteriol. Rev. 35 1971 171 205
18. P. Tamagnini, O. Troshina, F. Oxelfelt, R. Salema, and P. Lindblad Hydrogenases in Nostoc sp. strain PCC 73102, a strain lacking a bidirectional hydrogenase Appl. Environ. Microbiol. 63 1997 1801 1807
19. J.D. Thompson, D.G. Higgins, and T.J. Gibson CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Nucleic Acids Res. 22 1994 4673 4680
20. V. Drewett, H. Molina, A. Millar, S. Muller, F. Hesler, and P.E. Shaw DNA-bound transcription factor complexes analysed by mass-spectrometry: binding of novel proteins to the human c-fos SRE and related sequences Nucleic Acids Res. 29 2001 479 487
21. M. Wilm, A. Shevchenko, T. Houthaeve, S. Breit, L. Schweigerer, T. Fotsis, and M. Mann Femtomole sequencing of proteins from polyacrylamide gels by nano-electrospray mass spectrometry Nature 379 1996 466 469
22. S.F. Altschul, T.L. Madden, A.A. Schaffer, J.H. Zhang, Z. Zhang, W. Miller, and D.J. Lipman Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Res. 25 1997 3389 3402
23. J.W. Little, and D.W. Mount The SOS regulatory system of Escherichia coli Cell 29 1982 11 22
24. R. Wagner Transcription Regulation in Prokaryotes 2000 Oxford University Press Oxford
25. F. Domain, L. Houot, F. Chauvat, and C. Cassier-Chauvat Function and regulation of the cyanobacterial genes lexA, recA and ruvB: LexA is critical to the survival of cells facing inorganic carbon starvation Mol. Microbiol. 53 2004 65 80
26. A. Kamei, Y. Hihara, X. Geng, and M. Ikeuchi Functional analysis of lexA-like gene, sll1626 in Synechocystis sp. PCC 6803 using DNA microarray Plant Cell Physiol. Suppl. 32 2001 S95
27. G. Mazón, J.M. Lucena, S. Campoy, A.R. Henestrosa, P. Candau, and J. Barbé Fernández de LexA-binding sequences in Gram-positive and cyanobacteria are closely related Mol. Genet. Genom. 271 2004 40 49
28. G. Mazón, I. Erill, S. Campoy, P. Cortés, E. Forano, and J. Barbé Reconstruction of the evolutionary history of the LexA-binding sequence Microbiology 150 2004 3783 3795