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Volumn 19, Issue SUPPL. 2, 2003, Pages

Upper bounds on maximum likelihood for phylogenetic trees

Author keywords

[No Author keywords available]

Indexed keywords

CONFERENCE PAPER; GENE SEQUENCE; GENETIC MODEL; MATHEMATICAL ANALYSIS; MAXIMUM LIKELIHOOD METHOD; PHYLOGENETIC TREE; PRIORITY JOURNAL; SIMULATION; STOCHASTIC MODEL; SUBSTITUTION REACTION;

EID: 24744466926     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/btg1062     Document Type: Conference Paper
Times cited : (7)

References (17)
  • 1
    • 84959050942 scopus 로고    scopus 로고
    • Proceedings of the 1st Workshop on Algorithms in Bioinformatics, Lecture Notes in Computer Science 2149, Moret, B. and Gascuel, O. (eds), Springer, Heidelberg
    • Chor, B., Hendy, M.D. and Penny, D. (2001) Analytic solutions for three-taxon MLMC-trees with variable rates across sites, Proceedings of the 1st Workshop on Algorithms in Bioinformatics, Lecture Notes in Computer Science 2149, Moret, B. and Gascuel, O. (eds), Springer, Heidelberg, pp. 204-213.
    • (2001) Analytic Solutions for Three-Taxon MLMC-Trees with Variable Rates Across Sites , pp. 204-213
    • Chor, B.1    Hendy, M.D.2    Penny, D.3
  • 2
    • 0033795444 scopus 로고    scopus 로고
    • Multiple maxima of likelihood in phylogenetic trees: An analytic approach
    • Chor, B., Hendy, M.D., Holland, B.R. and Penny, D. (2000) Multiple maxima of likelihood in phylogenetic trees: an analytic approach. Mol. Biol. Evol., 17, 1529-1541.
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 1529-1541
    • Chor, B.1    Hendy, M.D.2    Holland, B.R.3    Penny, D.4
  • 3
    • 0038716206 scopus 로고    scopus 로고
    • Maximum likelihood on four taxa phylogenetic trees: Analytic solutions
    • to appear
    • Chor, B., Khetan, A. and Snir, S. (2003) Maximum likelihood on four taxa phylogenetic trees: analytic solutions. Proc. RECOMB 2003, to appear.
    • (2003) Proc. RECOMB 2003
    • Chor, B.1    Khetan, A.2    Snir, S.3
  • 4
    • 0000014501 scopus 로고
    • The relationship between simple evolutionary tree models and observable sequence data
    • Hendy, M.D. (1989) The relationship between simple evolutionary tree models and observable sequence data. Syst. Zool., 38, 310-321.
    • (1989) Syst. Zool. , vol.38 , pp. 310-321
    • Hendy, M.D.1
  • 5
    • 0020286044 scopus 로고
    • Branch and bound algorithms to determine minimal evolutionary trees
    • Hendy, M.D. and Penny, D. (1982) Branch and bound algorithms to determine minimal evolutionary trees. Math. Biosc., 59, 277-290.
    • (1982) Math. Biosc. , vol.59 , pp. 277-290
    • Hendy, M.D.1    Penny, D.2
  • 6
    • 0000084234 scopus 로고
    • A framework for the quantitative study of evolutionary trees
    • Hendy, M.D. and Penny, D. (1989) A framework for the quantitative study of evolutionary trees. Syst. Zool., 38, 297-309.
    • (1989) Syst. Zool. , vol.38 , pp. 297-309
    • Hendy, M.D.1    Penny, D.2
  • 7
    • 21144475766 scopus 로고
    • Spectral analysis of phylogenetic data
    • Hendy, M.D. and Penny, D. (1993) Spectral analysis of phylogenetic data. J. Classif., 10, 5-24.
    • (1993) J. Classif. , vol.10 , pp. 5-24
    • Hendy, M.D.1    Penny, D.2
  • 8
    • 0028255876 scopus 로고
    • Discrete Fourier analysis for evolutionary trees
    • Hendy, M.D., Penny, D. and Steel, M.A. (1994) Discrete Fourier analysis for evolutionary trees. Proc. Natl Acad. Sci. USA, 91, 3339-3343.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 3339-3343
    • Hendy, M.D.1    Penny, D.2    Steel, M.A.3
  • 9
    • 0038632308 scopus 로고    scopus 로고
    • Outgroup misplacement and phylogenetic inaccuracy under a molecular clock a simulation study
    • to appear
    • Holland, B.R., Penny, D. and Hendy, M.D. (2003) Outgroup misplacement and phylogenetic inaccuracy under a molecular clock a simulation study. Syst Biol., 52, to appear.
    • (2003) Syst Biol. , vol.52
    • Holland, B.R.1    Penny, D.2    Hendy, M.D.3
  • 10
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • Munro, H. (ed.). Academic Press, New York
    • Jukes, T. and Cantor, C. (1969) Evolution of protein molecules. In Munro, H. (ed.), Mammalian Protein Metabolism. Academic Press, New York, pp. 21-132.
    • (1969) Mammalian Protein Metabolism , pp. 21-132
    • Jukes, T.1    Cantor, C.2
  • 12
    • 0001879933 scopus 로고
    • Molecular studies of evolution: A source of novel statistical problems
    • Gupta, S. and Jackel, Y. (eds). Academic Press, New York
    • Neymann, J. (1971) Molecular studies of evolution: A source of novel statistical problems. In Gupta, S. and Jackel, Y. (eds), Statistical Decision Theory and related Topics. Academic Press, New York, pp. 1-27.
    • (1971) Statistical Decision Theory and Related Topics , pp. 1-27
    • Neymann, J.1
  • 13
    • 0023415277 scopus 로고
    • Turbotree: A fast algorithm for minimal trees
    • Penny, D. and Hendy, M.D. (1987) Turbotree: a fast algorithm for minimal trees. CABIOS, 3, 183-187.
    • (1987) CABIOS , vol.3 , pp. 183-187
    • Penny, D.1    Hendy, M.D.2
  • 14
    • 12044253706 scopus 로고
    • The maximum likelihood point for a phylogenetic tree is not unique
    • Steel, M. (1994) The maximum likelihood point for a phylogenetic tree is not unique. Syst. Biol., 43, 560-564.
    • (1994) Syst. Biol. , vol.43 , pp. 560-564
    • Steel, M.1
  • 15
    • 0040843405 scopus 로고    scopus 로고
    • Reconstructing phylogenies from nucleotide pattern probabilities: A survey and some new results
    • Steel, M., Hendy, M.D. and Penny, D. (1999) Reconstructing phylogenies from nucleotide pattern probabilities: A survey and some new results. Disc. Appl. Math., 89, 367-396.
    • (1999) Disc. Appl. Math. , vol.89 , pp. 367-396
    • Steel, M.1    Hendy, M.D.2    Penny, D.3
  • 16
    • 0001336205 scopus 로고    scopus 로고
    • Phylogenetic inference
    • Hillis, D., Moritz, C. and Mable, B. (eds). Sinauer, Sunderland, MA
    • Swofford, D., Olsen, G., Waddell, P. and Hillis, D. (1996) Phylogenetic inference. In Hillis, D., Moritz, C. and Mable, B. (eds), Molecular Systematics. Sinauer, Sunderland, MA, pp. 407-514.
    • (1996) Molecular Systematics , pp. 407-514
    • Swofford, D.1    Olsen, G.2    Waddell, P.3    Hillis, D.4
  • 17
    • 0034700877 scopus 로고    scopus 로고
    • Complexity of the simplest phylogenetic estimation problem
    • Yang, Z. (2000) Complexity of the simplest phylogenetic estimation problem. Proc. Roy. Soc. Lond. B, 267, 109-119.
    • (2000) Proc. Roy. Soc. Lond. B , vol.267 , pp. 109-119
    • Yang, Z.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.