-
3
-
-
0027076754
-
Salt dependence, kinetic properties and catalytic mechanism of N-formylmethanofuran:tetrahydromethanoplcrin formyltransferase from the extreme thcrmophile Methanopyrus kandleri
-
Breitung, J., G. Borner, S. Scholz, D. Linder, K. O. Stetter, and R. K. Thauer. 1992. Salt dependence, kinetic properties and catalytic mechanism of N-formylmethanofuran:tetrahydromethanoplcrin formyltransferase from the extreme thcrmophile Methanopyrus kandleri. Eur. J. Biochem. 210:971-981.
-
(1992)
Eur. J. Biochem.
, vol.210
, pp. 971-981
-
-
Breitung, J.1
Borner, G.2
Scholz, S.3
Linder, D.4
Stetter, K.O.5
Thauer, R.K.6
-
4
-
-
0026673373
-
Perspectives on formaldehyde toxicity: Separating fact from fantasy
-
Chang, C. C., and M. E. Gershwin. 1992. Perspectives on formaldehyde toxicity: separating fact from fantasy. Regul. Toxicol. Pharmacol. 16:150-160.
-
(1992)
Regul. Toxicol. Pharmacol.
, vol.16
, pp. 150-160
-
-
Chang, C.C.1
Gershwin, M.E.2
-
5
-
-
0037967152
-
Methylotrophy in Methylobacterium extorquens AM1 from a genomic point of view
-
Chistoserdova, L., S.-W. Chen, A. Lapidus, and M. E. Lidstrom. 2003. Methylotrophy in Methylobacterium extorquens AM1 from a genomic point of view. J. Bacteriol. 185:2980-2987.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 2980-2987
-
-
Chistoserdova, L.1
Chen, S.-W.2
Lapidus, A.3
Lidstrom, M.E.4
-
6
-
-
3042548836
-
The enigmatic planctomycetes may hold a key to the origins of methanogenesis and methylotrophy
-
Chistoserdova, L., C. Jenkins, M. G. Kalyuzhnaya, C. J. Marx, A. Lapidus, J. A. Vorholt, J. T. Staley, and M. E. Lidstrom. 2004. The enigmatic planctomycetes may hold a key to the origins of methanogenesis and methylotrophy. Mol. Biol. Evol. 21:1234-1241.
-
(2004)
Mol. Biol. Evol.
, vol.21
, pp. 1234-1241
-
-
Chistoserdova, L.1
Jenkins, C.2
Kalyuzhnaya, M.G.3
Marx, C.J.4
Lapidus, A.5
Vorholt, J.A.6
Staley, J.T.7
Lidstrom, M.E.8
-
7
-
-
0028215037
-
Genetics of the serine cycle in Methylobacterium extorquens AMI: Identification of sgaA and mtdA and sequences of sgaA, hprA, and mtdA
-
Chistoserdova, L., and M. E. Lidstrom. 1994. Genetics of the serine cycle in Methylobacterium extorquens AMI: identification of sgaA and mtdA and sequences of sgaA, hprA, and mtdA. J. Bacteriol. 176:1957-1968.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 1957-1968
-
-
Chistoserdova, L.1
Lidstrom, M.E.2
-
8
-
-
15244341649
-
Novel dephosphotetrahydromethanopterin biosynthesis genes discovered via mutagenesis in Methylobacterium extorquens AM1
-
Chistoserdova, L., M. E. Rasche, and M. E. Lidstrom. 2005. Novel dephosphotetrahydromethanopterin biosynthesis genes discovered via mutagenesis in Methylobacterium extorquens AM1. J. Bacteriol. 187:2508-2512.
-
(2005)
J. Bacteriol.
, vol.187
, pp. 2508-2512
-
-
Chistoserdova, L.1
Rasche, M.E.2
Lidstrom, M.E.3
-
10
-
-
0036046380
-
Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylobacterium extorquens AMI
-
Ermler, U., C. H. Hagemeier, A. Roth, U. Demmer, W. Grabarse, E. Warkentin, and J. A. Vorholt. 2002. Structure of methylene- tetrahydromethanopterin dehydrogenase from Methylobacterium extorquens AMI. Structure 10:1127-1137.
-
(2002)
Structure
, vol.10
, pp. 1127-1137
-
-
Ermler, U.1
Hagemeier, C.H.2
Roth, A.3
Demmer, U.4
Grabarse, W.5
Warkentin, E.6
Vorholt, J.A.7
-
11
-
-
0242353788
-
-
Sinauer Associates, Inc., Sunderland, Mass.
-
Felsenstein, J. 2003. Inferring phytogenies. Sinauer Associates, Inc., Sunderland, Mass.
-
(2003)
Inferring Phytogenies
-
-
Felsenstein, J.1
-
12
-
-
0025755332
-
Aldehydes: Occurrence, carcinogenic potential, mechanism of action and risk assessment
-
Feron, V. J., H. P. Til, F. de Vrijer, R. A. Woutersen, F. R. Cassee, and P. J. van Bladeren. 1991. Aldehydes: occurrence, carcinogenic potential, mechanism of action and risk assessment. Mutat. Res. 259:363-385.
-
(1991)
Mutat. Res.
, vol.259
, pp. 363-385
-
-
Feron, V.J.1
Til, H.P.2
De Vrijer, F.3
Woutersen, R.A.4
Cassee, F.R.5
Van Bladeren, P.J.6
-
13
-
-
0037478650
-
Complete genome sequence of the marine planctomycete Pirellula sp. strain 1
-
Glöckner, F. O., M. Kube, M. Bauer, H. Teeling, T. Lombardot, W. Ludwig, D. Gade, A. Beck, K. Borzym, K. Heitmann, R. Rabus, H. Schlesner, R. Amann, and R. Reinhardt. 2003. Complete genome sequence of the marine planctomycete Pirellula sp. strain 1. Proc. Natl. Acad. Sci. USA 100:8298-8303.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 8298-8303
-
-
Glöckner, F.O.1
Kube, M.2
Bauer, M.3
Teeling, H.4
Lombardot, T.5
Ludwig, W.6
Gade, D.7
Beck, A.8
Borzym, K.9
Heitmann, K.10
Rabus, R.11
Schlesner, H.12
Amann, R.13
Reinhardt, R.14
-
14
-
-
0036122466
-
Purification and characterization of the methylene tetrahydromethanopterin dehydrogenase MtdB and the methylene tetrahydrofolate dehydrogenase Fo1D from Hyphomicrobium zavarzinii ZV580
-
Goenrich, M., J. Bursy, E. Hubner, D. Linder, A. C. Schwartz, and J. A. Vorholt. 2002. Purification and characterization of the methylene tetrahydromethanopterin dehydrogenase MtdB and the methylene tetrahydrofolate dehydrogenase Fo1D from Hyphomicrobium zavarzinii ZV580. Arch. Microbiol. 177:299-303.
-
(2002)
Arch. Microbiol.
, vol.177
, pp. 299-303
-
-
Goenrich, M.1
Bursy, J.2
Hubner, E.3
Linder, D.4
Schwartz, A.C.5
Vorholt, J.A.6
-
15
-
-
0033947589
-
Characterization of a second methylene tetrahydromethanopterin dehydrogenase from Methylobacterium extorquens AM1
-
Hagemeier, C. H., L. Chistoserdova, M. E. Lidstrom, R. K. Thauer, and J. A. Vorholt. 2000. Characterization of a second methylene tetrahydromethanopterin dehydrogenase from Methylobacterium extorquens AM1. Eur. J. Biochem. 267:3762-3769.
-
(2000)
Eur. J. Biochem.
, vol.267
, pp. 3762-3769
-
-
Hagemeier, C.H.1
Chistoserdova, L.2
Lidstrom, M.E.3
Thauer, R.K.4
Vorholt, J.A.5
-
16
-
-
3042605870
-
Utility of environmental probes targeting ancient enzymes: Methylotroph detection in Lake Washington
-
Kalyuzhnaya, M. G., M. E. Lidstrom, and L. Chistoserdova. 2004. Utility of environmental probes targeting ancient enzymes: methylotroph detection in Lake Washington. Mierob. Ecol. 48:463-472.
-
(2004)
Mierob. Ecol.
, vol.48
, pp. 463-472
-
-
Kalyuzhnaya, M.G.1
Lidstrom, M.E.2
Chistoserdova, L.3
-
18
-
-
21144441411
-
Analysis of gene islands involved in methanopterin-linked C, transfer reactions reveals new functions and provides evolutionary insights
-
Kalyuzhnaya, M. G., N. Korotkova, G. Crowther, C. J. Marx, M. E. Lidstrom, and L. Chistoserdova. 2005. Analysis of gene islands involved in methanopterin-linked C, transfer reactions reveals new functions and provides evolutionary insights. J. Bacteriol. 187:4607-4614.
-
(2005)
J. Bacteriol.
, vol.187
, pp. 4607-4614
-
-
Kalyuzhnaya, M.G.1
Korotkova, N.2
Crowther, G.3
Marx, C.J.4
Lidstrom, M.E.5
Chistoserdova, L.6
-
19
-
-
0035986644
-
Dichloromethane metabolism and C1 utilization genes in Methylobacterium strains
-
Kayser, M. F., Z. Ucurum, and S. Vuilleumier. 2002. Dichloromethane metabolism and C1 utilization genes in Methylobacterium strains. Microbiology 148:1915-1922.
-
(2002)
Microbiology
, vol.148
, pp. 1915-1922
-
-
Kayser, M.F.1
Ucurum, Z.2
Vuilleumier, S.3
-
21
-
-
0345097575
-
Formaldehydedetoxifying role of the tetrahydromethanopterin-linked pathway in Methylobacierium extorquens AMI
-
Marx, C. J., L. Chistoserdova, and M. E. Lidstrom. 2003. Formaldehydedetoxifying role of the tetrahydromethanopterin-linked pathway in Methylobacierium extorquens AMI. J. Bacteriol. 185:7160-7168.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 7160-7168
-
-
Marx, C.J.1
Chistoserdova, L.2
Lidstrom, M.E.3
-
22
-
-
0034858690
-
Development of improved versatile broad-host-range vectors for use in methylotrophs and other gram-negative bacteria
-
Marx, C. J., and M. E. Lidstrom. 2001. Development of improved versatile broad-host-range vectors for use in methylotrophs and other gram-negative bacteria. Microbiology 147:2065-2075.
-
(2001)
Microbiology
, vol.147
, pp. 2065-2075
-
-
Marx, C.J.1
Lidstrom, M.E.2
-
23
-
-
1642555532
-
Development of an insertional expression vector system for Methylobacterium extorquens AM1 and generation of null mutants lacking mtdA and/or fch
-
Marx, C. J., and M. E. Lidstrom. 2004. Development of an insertional expression vector system for Methylobacterium extorquens AM1 and generation of null mutants lacking mtdA and/or fch. Microbiology 150:9-19.
-
(2004)
Microbiology
, vol.150
, pp. 9-19
-
-
Marx, C.J.1
Lidstrom, M.E.2
-
24
-
-
1642310209
-
Multiple formaldehyde oxidation/detoxification pathways in Burkholderia fungorum LB400
-
Marx, C. J., J. A. Miller, L. Chistoserdova, and M. E. Lidstrom. 2004. Multiple formaldehyde oxidation/detoxification pathways in Burkholderia fungorum LB400. J. Bacteriol. 186:2173-2178.
-
(2004)
J. Bacteriol.
, vol.186
, pp. 2173-2178
-
-
Marx, C.J.1
Miller, J.A.2
Chistoserdova, L.3
Lidstrom, M.E.4
-
25
-
-
14544294928
-
Flux analysis uncovers key role of functional redundancy in formaldehyde metabolism
-
Marx, C. J., S. J. Van Dien, and M. E. Lidstrom. 2005. Flux analysis uncovers key role of functional redundancy in formaldehyde metabolism. PloS Biol. 3:el6.
-
(2005)
PloS Biol.
, vol.3
-
-
Marx, C.J.1
Van Dien, S.J.2
Lidstrom, M.E.3
-
26
-
-
0031685510
-
Biochemistry of methanogenesis: A tribute to Majory Stephenson
-
Thauer, R. K. 1998. Biochemistry of methanogenesis: a tribute to Majory Stephenson. Microbiology 144:2377-2406.
-
(1998)
Microbiology
, vol.144
, pp. 2377-2406
-
-
Thauer, R.K.1
-
27
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acid Res. 22:4673-4680.
-
(1994)
Nucleic Acid Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
28
-
-
0036042189
-
Cofactor-dependent pathways of formaldehyde oxidation in methylotrophic bacteria
-
Vorholt, J. A. 2002. Cofactor-dependent pathways of formaldehyde oxidation in methylotrophic bacteria. Arch. Microbiol. 178:239-249.
-
(2002)
Arch. Microbiol.
, vol.178
, pp. 239-249
-
-
Vorholt, J.A.1
-
29
-
-
0031679835
-
The NADP-dependent methylene tetrahydromethanopterin dehydrogenase in Methylobacterium extorquens AM1
-
Vorholt, J. A., L. Chistoserdova, M. E. Lidstrom, and R. K. Thauer. 1998. The NADP-dependent methylene tetrahydromethanopterin dehydrogenase in Methylobacterium extorquens AM1. J. Bacteriol. 180:5351-5356.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 5351-5356
-
-
Vorholt, J.A.1
Chistoserdova, L.2
Lidstrom, M.E.3
Thauer, R.K.4
-
30
-
-
0032834938
-
Distribution of tetrahydromethanopterin-dependent enzymes in methylotrophic bacteria and phylogeny of methenyl tetrahydromethanopterin cyclohydrolases
-
Vorholt, J. A., L. Chistoserdova, S. M. Stolyar, R. K. Thauer, and M. E. Lidstrom. 1999. Distribution of tetrahydromethanopterin-dependent enzymes in methylotrophic bacteria and phylogeny of methenyl tetrahydromethanopterin cyclohydrolases. J. Bacteriol. 181:5750-5757.
-
(1999)
J. Bacteriol.
, vol.181
, pp. 5750-5757
-
-
Vorholt, J.A.1
Chistoserdova, L.2
Stolyar, S.M.3
Thauer, R.K.4
Lidstrom, M.E.5
-
31
-
-
0034460957
-
Novel formaldehyde-activating enzyme in Methylobacterium extorquens AM1 required for growth on methanol
-
Vorholt, J. A., C. J. Marx, M. E. Lidstrom, and R. K. Thauer. 2000. Novel formaldehyde-activating enzyme in Methylobacterium extorquens AM1 required for growth on methanol. J. Bacteriol. 182:6645-6650.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 6645-6650
-
-
Vorholt, J.A.1
Marx, C.J.2
Lidstrom, M.E.3
Thauer, R.K.4
-
32
-
-
8844264574
-
Genomic insights into methanotrophy: The complete genome sequence of Methylococcus capsulatus (Bath)
-
Ward, N., OØ. Larsen, J. Sakwa, L. Bruseth, H. Khouri, A. S. Durkin, G. Dimitrov, L. Jiang, D. Scanlan, K. H. Kang, M. Lewis, K. E. Nelson, B. Methe, M. Wu, J. F. Heidelberg, I. T. Paulsen, D. Fouts, J. Ravel, H. Tettelin, Q. Ren, T. Read, R. T. DeBoy, R. Seshadri, S. L. Salzberg, H. B. Jensen, N. K. Birkeland, W. C. Nelson, R. J. Dodson, S. H. Grindhaug, I. Holt, I. Eidhammer, I. Jonasen, S. Vanaken, T. Utterback, T. V. Feldblyum, C. M. Fraser, J. R. Lillehaug, and J. A. Eisen. 2004. Genomic insights into methanotrophy: the complete genome sequence of Methylococcus capsulatus (Bath). PLoS Biol. 2:e303.
-
(2004)
PLoS Biol.
, vol.2
-
-
Ward, N.1
Larsen, O.Ø.2
Sakwa, J.3
Bruseth, L.4
Khouri, H.5
Durkin, A.S.6
Dimitrov, G.7
Jiang, L.8
Scanlan, D.9
Kang, K.H.10
Lewis, M.11
Nelson, K.E.12
Methe, B.13
Wu, M.14
Heidelberg, J.F.15
Paulsen, I.T.16
Fouts, D.17
Ravel, J.18
Tettelin, H.19
Ren, Q.20
Read, T.21
DeBoy, R.T.22
Seshadri, R.23
Salzberg, S.L.24
Jensen, H.B.25
Birkeland, N.K.26
Nelson, W.C.27
Dodson, R.J.28
Grindhaug, S.H.29
Holt, I.30
Eidhammer, I.31
Jonasen, I.32
Vanaken, S.33
Utterback, T.34
Feldblyum, T.V.35
Fraser, C.M.36
Lillehaug, J.R.37
Eisen, J.A.38
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