-
1
-
-
0035478709
-
Analysis of phosphorylated proteins and peptides by mass spectrometry
-
McLachlin, D. T., and Chait, B. T. (2001) Analysis of phosphorylated proteins and peptides by mass spectrometry. Curr. Opin. Chem. Biol. 5, 591-602
-
(2001)
Curr. Opin. Chem. Biol.
, vol.5
, pp. 591-602
-
-
McLachlin, D.T.1
Chait, B.T.2
-
2
-
-
0035830403
-
Influence of myristoylation, phosphorylation, and deamidation on the structural behavior of the N-terminus of the catalytic subunit of CAMP-dependent protein kinase
-
Tholey, A., Pipkorn, R., Bossemeyer, D., Kinzel, V., and Reed, J. (2001) Influence of myristoylation, phosphorylation, and deamidation on the structural behavior of the N-terminus of the catalytic subunit of CAMP-dependent protein kinase. Biochemistry 40, 225-231
-
(2001)
Biochemistry
, vol.40
, pp. 225-231
-
-
Tholey, A.1
Pipkorn, R.2
Bossemeyer, D.3
Kinzel, V.4
Reed, J.5
-
3
-
-
0035970301
-
Phosphorylation-induced structural changes in the amyloid precursor protein cytoplasmic tail detected by NMR
-
Ramelot, T. A., and Nicholson, L. K. (2001) Phosphorylation-induced structural changes in the amyloid precursor protein cytoplasmic tail detected by NMR. J. Mol. Biol. 307, 871-884
-
(2001)
J. Mol. Biol.
, vol.307
, pp. 871-884
-
-
Ramelot, T.A.1
Nicholson, L.K.2
-
4
-
-
0042591409
-
Tyrosine phosphorylation of the well packed ephrinb cytoplasmic beta-hairpin for reverse signaling - Structural consequences and binding properties
-
Song, J. (2003) Tyrosine phosphorylation of the well packed ephrinb cytoplasmic beta-hairpin for reverse signaling - structural consequences and binding properties. J. Biol. Chem. 278, 24714-24720
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 24714-24720
-
-
Song, J.1
-
5
-
-
0035937549
-
Flipping a switch
-
Buck, M., and Rosen, M. K. (2001) Flipping a switch. Science 291, 2329-2330
-
(2001)
Science
, vol.291
, pp. 2329-2330
-
-
Buck, M.1
Rosen, M.K.2
-
6
-
-
0035937443
-
Two-state allosteric behavior in a single-domain signaling protein
-
Volkman, B. F., Lipson, D., Wemmer, D. E., and Kern, D. (2001) Two-state allosteric behavior in a single-domain signaling protein. Science 291, 2429-2433
-
(2001)
Science
, vol.291
, pp. 2429-2433
-
-
Volkman, B.F.1
Lipson, D.2
Wemmer, D.E.3
Kern, D.4
-
7
-
-
0032922002
-
Phosphobase, a database of phosphorylation sites: Release 2.0
-
Kreegipuu, A., Blom, N., and Brunak, S. (1999) Phosphobase, a database of phosphorylation sites: release 2.0. Nucleic Acids Res. 27, 237-239
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 237-239
-
-
Kreegipuu, A.1
Blom, N.2
Brunak, S.3
-
8
-
-
0036901003
-
Multisite phosphorylation provides sophisticated regulation of transcription factors
-
Holmberg, C., Tran, S., Eriksson, J., and Sistonen, L. (2002) Multisite phosphorylation provides sophisticated regulation of transcription factors. Trends Biochem. Sci. 27, 619-627
-
(2002)
Trends Biochem. Sci.
, vol.27
, pp. 619-627
-
-
Holmberg, C.1
Tran, S.2
Eriksson, J.3
Sistonen, L.4
-
9
-
-
0033634846
-
Concerted dephosphorylation of the transcription factor NFAT1 induces a conformational switch that regulates transcriptional activity
-
Okamura, H., Aramburu, J., Garcia-Rodriguez, C., Viola, J. P. B., Raghavan, A., Tahiliani, M., Zhang, X., Qin, J., Hogan, P., and Rao, A. (2000) Concerted dephosphorylation of the transcription factor NFAT1 induces a conformational switch that regulates transcriptional activity. Mol. Cell 6, 539-550
-
(2000)
Mol. Cell
, vol.6
, pp. 539-550
-
-
Okamura, H.1
Aramburu, J.2
Garcia-Rodriguez, C.3
Viola, J.P.B.4
Raghavan, A.5
Tahiliani, M.6
Zhang, X.7
Qin, J.8
Hogan, P.9
Rao, A.10
-
10
-
-
0141483523
-
Transcriptional regulation by calcium, calcineurin, and NFAT
-
Hogan, P. G., Chen, L., Nardone, J., and Rao, A. (2003) Transcriptional regulation by calcium, calcineurin, and NFAT. Genes Dev. 17, 2205-2232
-
(2003)
Genes Dev.
, vol.17
, pp. 2205-2232
-
-
Hogan, P.G.1
Chen, L.2
Nardone, J.3
Rao, A.4
-
11
-
-
0036234543
-
NFAT signaling: Choreographing the social lives of cells
-
Crabtree, G. R., and Olson, E. N. (2002) NFAT signaling: choreographing the social lives of cells. Cell 109, S67-S79
-
(2002)
Cell
, vol.109
-
-
Crabtree, G.R.1
Olson, E.N.2
-
12
-
-
0034691195
-
A second calcineurin binding site on the NFAT regulatory domain
-
Park, S., Uesugi, M., and Verdine, G. (2000) A second calcineurin binding site on the NFAT regulatory domain. Proc. Natl. Acad. Sci. USA 97, 7130-7135
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 7130-7135
-
-
Park, S.1
Uesugi, M.2
Verdine, G.3
-
13
-
-
0035913754
-
Atomistic Brownian dynamics simulation of peptide phosphorylation
-
Shen, T., Wong, C., and McCammon, J. (2001) Atomistic Brownian dynamics simulation of peptide phosphorylation. J. Am. Chem. Soc. 123, 9107-9111
-
(2001)
J. Am. Chem. Soc.
, vol.123
, pp. 9107-9111
-
-
Shen, T.1
Wong, C.2
McCammon, J.3
-
14
-
-
0035327183
-
Evaluating protein structure-prediction schemes using energy landscape theory
-
Eastwood, M., Hardin, C., Luthey-Schulten, Z., and Wolynes, P. G. (2001) Evaluating protein structure-prediction schemes using energy landscape theory. IBM J. Res. Dev. 45, 475-497
-
(2001)
IBM J. Res. Dev.
, vol.45
, pp. 475-497
-
-
Eastwood, M.1
Hardin, C.2
Luthey-Schulten, Z.3
Wolynes, P.G.4
-
15
-
-
0001683768
-
Toward protein tertiary structure recognition by means of associative memory hamiltonians
-
Friedrichs, M., and Wolynes, P. (1989) Toward protein tertiary structure recognition by means of associative memory hamiltonians. Science 246, 371-373
-
(1989)
Science
, vol.246
, pp. 371-373
-
-
Friedrichs, M.1
Wolynes, P.2
-
16
-
-
0026124585
-
Electrostatics and diffusion of molecules in solution: Simulations with the University of Houston Brownian Dynamics program
-
Davis, M. E., Madura, J. D., Luty, B. A., and McCammon, J. A. (1991) Electrostatics and diffusion of molecules in solution: simulations with the University of Houston Brownian Dynamics program. Comput. Phys. Commun. 62, 187-197
-
(1991)
Comput. Phys. Commun.
, vol.62
, pp. 187-197
-
-
Davis, M.E.1
Madura, J.D.2
Luty, B.A.3
McCammon, J.A.4
-
17
-
-
0029011701
-
A second generation force field for the simulation of proteins, nucleic acids, and organic molecules
-
Cornell, W. D., Cieplak, P., Bayly, C. I., Gould, I. R., Merz, K. M., Ferguson, D. M., Spellmeyer, D. C., Fox, T., Caldwell, J. W., and Kollman, P. A. (1995) A second generation force field for the simulation of proteins, nucleic acids, and organic molecules. J. Am. Chem. Soc. 117, 5179-5197
-
(1995)
J. Am. Chem. Soc.
, vol.117
, pp. 5179-5197
-
-
Cornell, W.D.1
Cieplak, P.2
Bayly, C.I.3
Gould, I.R.4
Merz, K.M.5
Ferguson, D.M.6
Spellmeyer, D.C.7
Fox, T.8
Caldwell, J.W.9
Kollman, P.A.10
-
18
-
-
4043171970
-
The GB/SA continuum model for solvation. A fast analytical method for the calculation of approximate Born radii
-
Qiu, D., Shenkin, P. S., Hollinger, F. P., and Clark Still, W. (1997) The GB/SA continuum model for solvation. A fast analytical method for the calculation of approximate Born radii. J. Phys. Chem. A 101, 3005-3014
-
(1997)
J. Phys. Chem. A
, vol.101
, pp. 3005-3014
-
-
Qiu, D.1
Shenkin, P.S.2
Hollinger, F.P.3
Clark Still, W.4
-
19
-
-
3042524904
-
A well-behaved electrostatic potential based method using charge restraints for deriving atom in charges: The resp model
-
Bayly, C. I., Cieplak, P., Cornell, W. D., and Kollman, P. A. (1993) A well-behaved electrostatic potential based method using charge restraints for deriving atom in charges: the resp model. J. Phys. Chem. 97, 10269-10280
-
(1993)
J. Phys. Chem.
, vol.97
, pp. 10269-10280
-
-
Bayly, C.I.1
Cieplak, P.2
Cornell, W.D.3
Kollman, P.A.4
-
20
-
-
0029895539
-
Self-consistently optimized statistical mechanical energy functions for sequence structure alignment
-
Koretke, K. K., Luthey-Schulten, Z., and Wolynes, P. (1996) Self-consistently optimized statistical mechanical energy functions for sequence structure alignment. Protein Sci. 5, 1043-1059
-
(1996)
Protein Sci.
, vol.5
, pp. 1043-1059
-
-
Koretke, K.K.1
Luthey-Schulten, Z.2
Wolynes, P.3
-
21
-
-
0032554636
-
Role of phosphorylation in determining the backbone dynamics of the serine/threonine-proline motif and pin1 substrate recognition
-
Schutkowski, M., Bernhardt, A., Zhou, X. Z., Shen, M., Reimer, U., Rahfeld, J.-U., Lu, K P., and Fischer, G. (1998) Role of phosphorylation in determining the backbone dynamics of the serine/threonine-proline motif and pin1 substrate recognition. Biochemistry 37, 5566-5575
-
(1998)
Biochemistry
, vol.37
, pp. 5566-5575
-
-
Schutkowski, M.1
Bernhardt, A.2
Zhou, X.Z.3
Shen, M.4
Reimer, U.5
Rahfeld, J.-U.6
Lu, K.P.7
Fischer, G.8
-
22
-
-
0027474991
-
Left-handed polyproline II helices commonly occur in globular proteins
-
Adzhubei, A. A., and Sternberg, M. J. E. (1993) Left-handed polyproline II helices commonly occur in globular proteins. J. Mol. Biol. 229, 472-493
-
(1993)
J. Mol. Biol.
, vol.229
, pp. 472-493
-
-
Adzhubei, A.A.1
Sternberg, M.J.E.2
-
24
-
-
1542618345
-
Water in protein structure prediction
-
Papoian, G. A., Ulander, J., Eastwood, M. P., Luthey-Schulten, Z., and Wolynes, P. G. (2004) Water in protein structure prediction. Proc. Natl. Acad. Sci. USA 101, 3352-3357
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 3352-3357
-
-
Papoian, G.A.1
Ulander, J.2
Eastwood, M.P.3
Luthey-Schulten, Z.4
Wolynes, P.G.5
-
25
-
-
0034687712
-
Associative memory hamiltonians for structure prediction without homology: Alpha-helical proteins
-
Hardin, C., Eastwood, M. P., Luthey-Schulten, Z., and Wolynes, P. G. (2000) Associative memory hamiltonians for structure prediction without homology: Alpha-helical proteins. Proc. Natl. Acad. Sci. USA 97, 14235-14240
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 14235-14240
-
-
Hardin, C.1
Eastwood, M.P.2
Luthey-Schulten, Z.3
Wolynes, P.G.4
-
26
-
-
0037452701
-
Associative memory hamiltonians for structure prediction without homology: Alpha/beta proteins
-
Hardin, C., Eastwood, M. P., Prentiss, M. C., Luthey-Schulten, Z., and Wolynes, P. (2003) Associative memory hamiltonians for structure prediction without homology: alpha/beta proteins. Proc. Natl. Acad. Sci. USA 100, 1679-1684
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 1679-1684
-
-
Hardin, C.1
Eastwood, M.P.2
Prentiss, M.C.3
Luthey-Schulten, Z.4
Wolynes, P.5
-
27
-
-
0026633117
-
Natural polypeptides in left-handed helical conformation a circular dichroism study of the linker histones' C-terminal fragments and small beta-endorphin
-
Makarov, A. A., Lobachov, V. M., Adzhubei, I. A., and Esipova, N. G. (1992) Natural polypeptides in left-handed helical conformation a circular dichroism study of the linker histones' C-terminal fragments and small beta-endorphin. FEBS Lett. 306, 63-65
-
(1992)
FEBS Lett.
, vol.306
, pp. 63-65
-
-
Makarov, A.A.1
Lobachov, V.M.2
Adzhubei, I.A.3
Esipova, N.G.4
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