Proteomic patterns established with capillary electrophoresis and mass spectrometry for diagnostic purposes

Kidney International

Volumn 65, Issue 6, 2004, Pages 2426-2434

  Weissinger, Eva M ^b   Wittke, Stefan ^b   Kaiser, Thorsten ^b   Haller, Hermann ^b   Bartel, Sebastian ^b   Krebs, Ronald ^b   Golovko, Igor ^b   Rupprecht, Harald D ^b   Haubitz, Marion ^b   Hecker, Hartmut ^b   Mischak, Harald ^b   Fliser, Danilo ^a  

^a HANNOVER MEDICAL SCHOOL   (Germany)

^b NONE

Author keywords

Capillary electrophoresis mass spectometry; Nephritis; Proteomics

Indexed keywords

POLYPEPTIDE; REAGENT;

ADULT; AGED; ARTICLE; BODY FLUID; CAPILLARY ELECTROPHORESIS; CONTROLLED STUDY; DIAGNOSTIC PROCEDURE; FEMALE; FOCAL GLOMERULOSCLEROSIS; HUMAN; MALE; MASS SPECTROMETRY; MEDICAL TECHNOLOGY; MEMBRANOUS GLOMERULONEPHRITIS; MINIMAL CHANGE GLOMERULONEPHRITIS; PRIORITY JOURNAL; PROTEIN DETERMINATION; PROTEOMICS; STATISTICAL SIGNIFICANCE; URINALYSIS;

EID: 2442670130     PISSN: 00852538     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1523-1755.2004.00659.x     Document Type: Article

References (18)

1. MCKEE JA, KUMAR S, ECELBARGER CA, et al: Detection of Na(+) transporter proteins in urine. J Am Soc Nephrol 11:2128-2132, 2000
2. OHKARU Y, ASAYAMA K, ISHII H, et al: Development of a sandwich enzyme-linked immunosorbent assay for the determination of human heart type fatty acid-binding protein in plasma and urine by using two different monoclonal antibodies specific for human heart fatty acid-binding protein. J Immunol Methods 178:99-111, 1995
3. SUZUKI M, KOBAYASHI H, FUJIE M, et al: Kunitz-type protease inhibitor bikunin disrupts phorbol ester-induced oligomerization of CD44 variant isoforms containing epitope v9 and subsequently suppresses expression of urokinase-type plasminogen activator in human chondrosarcoma cells. J Biol Chem 277:8022-8032, 2002
4. HOCHSTRASSER DF, SANCHEZ JC, APPEL RD: Proteomics and its trends facing nature's complexity. Proteomics 2:807-812, 2002
5. JUNGBLUT P, WITTMANN-LIEBOLD B: Protein analysis on a genomic scale. J Biotechnol 41:111-120, 1995
6. KLOSE J, KOBALZ U: Two-dimensional electrophoresis of proteins: An updated protocol and implications for a functional analysis of the genome. Electrophoresis 16:1034-1059, 1995
7. MARSHALL T, WILLIAMS K: Two-dimensional electrophoresis of human urinary proteins following concentration by dye precipitation. Electrophoresis 17:1265-1272, 1996
8. PETRICOIN EF, ARDEKANI AM, HITT BA, et al: Use of proteomic patterns in serum to identify ovarian cancer. Lancet 359:572-577, 2002
9. HAMPEL DJ, SANSOME C, SHA M, et al: Toward proteomics in uroscopy: Urinary protein profiles after radiocontrast medium administration. J Am Soc Nephrol 12:1026-1035, 2001
10. WITTKE S, FLISER D, HAUBITZ M, et al: Determination of peptides and proteins in human urine with CE-MS-suitable tool for the establishment of new diagnostic markers. J Chromatogr A 1013:173-181, 2003
11. KAISER T, HERMANN A, KIELSTEIN JT, et al: Capillary electrophoresis coupled mass spectrometry to establish polypeptide patterns in dialysis fluids. J Chromatogr A 1013:157-171, 2003
12. STEINBERG D, COLLA P: CART - Classification and Regression Trees, San Diego, CA, Salford Systems, 1997
13. DIETERLE F, MULLER-HAGEDORN S, LIEBICH HM, GAUGLITZ G: Urinary nucleosides as potential tumor markers evaluated by learning vector quantization. Artif Intell Med 28:265-279, 2003
14. BROWN MP, GRUNDY WN, LIN D, et al: Knowledge-based analysis of microarray gene expression data by using support vector machines. Proc Natl Acad Sci USA 97:262-267, 2000
15. DOLNIK V, HUTTERER KM: Capillary electrophoresis of proteins 1999-2001. Electrophoresis 22:4163-4178, 2001
16. JENSEN PK, PASA-TOLIC L, ANDERSON GA, et al: Probing proteomes using capillary isoelectric focusing-electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry. Anal Chem 71:2076-2084, 1999
17. THONGBOONKERD V, MCLEISH KR, ARTHUR JM, KLEIN JB: Proteomic analysis of normal human urinary proteins isolated by acetone precipitation or ultracentrifugation. Kidney Int 62:1461-1469, 2001
18. SPAHR CS, DAVIS MT, MCGINLEY MD, et al: Towards defining the urinary proteome using liquid chromatography-tandem mass spectrometry. I. Profiling an unfractionated tryptic digest. Proteomics 1:93-107, 2001