Suppression of post-transcriptional gene silencing by callus induction and virus infection reveals the existence of aberrant RNAs

Plant Science

Volumn 167, Issue 1, 2004, Pages 159-164

  Corrêa, Régis L ^a   Gomes, Luciana L ^a   Margis, Rogério ^a   Vaslin, Maïté F S ^a  

^a FEDERAL UNIVERSITY OF RIO DE JANEIRO   (Brazil)

Author keywords

Aberrant RNA; Andean potato mottle virus; Post transcriptional gene silencing; Potato virus Y; RNAi; Silencing suppression

Indexed keywords

GENES; RNA; TISSUE; TOBACCO; VIRUSES;

GENE SILENCING; TOBACCO PLANTS; TRANSGENIC LINES;

PLANTS (BOTANY);

ANDEAN POTATO MOTTLE VIRUS; NICOTIANA OBTUSIFOLIA; NICOTIANA TABACUM; POTATO VIRUS Y; POTYVIRUS; SOLANUM TUBEROSUM;

EID: 2442555136     PISSN: 01689452     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plantsci.2004.03.014     Document Type: Article

References (32)

1. Cogoni C., Macino G. Post-transcriptional gene silencing across kingdoms. Curr. Opin. Genet. Dev. 10:2000;638-643
2. Waterhouse P.M., Helliwell C.A. Exploring plant genomes by RNA-induced gene silencing. Nature Rev. Genet. 4:2003;29-38
3. Vaslin M.F.S., Vidal M.S., Alves E.D., Farinelli L., de Oliveira D.E. Co-suppression mediated virus resistance in transgenic tobacco plants harboring the 3′-untranslated region of Andean potato mottle virus. Transgenic Res. 10:2001;489-499
4. Neves-Borges A.C., Collares W.M., Pontes J.A., Breyne P., Farinelli L., de Oliveira D.E. Coat protein RNAs-mediated protection against Andean potato mottle virus in transgenic tobacco. Plant Sci. 160:2001;699-712
5. Waterhouse P.M., Wang M.-B., Lough T. Gene silencing as an adaptive defence against viruses. Nature. 411:2001;834-842
6. Bernstein E., Caudy A.A., Hammond S.M., Hannon G.J. Role for a bidentate ribonuclease in the initiation step of RNA interference. Nature. 409:2001;363-366
7. Hamilton A.J., Baulcombe D.C. A species of small antisense RNA in post-transcriptional gene silencing in plants. Science. 286:1999;950-952
8. Zamore P.D., Tuschl T., Sharp P.A., Bartel D.P. RNAi: double-stranded RNA directs the ATP-dependent cleavage of mRNA at 21-23 nucleotide intervals. Cell. 101:2000;25-33
9. Hannon J.H. RNA interference. Nature. 418:2002;244-251
10. Waterhouse P.M., Wang M.-B., Finnegan E.J. Role of short RNAs in gene silencing. Trends Plant Sci. 6:2001;297-301
11. Himber C., Dunoyer P., Moissiard G., Ritzenthaler C., Voinnet O. Transitivity-dependent and -independent cell-to-cell movement of RNA silencing. EMBO J. 17:2003;4523-4533
12. Lipardi C., Wei Q., Paterson B.M. RNAi as random degradative PCR: siRNA primers convert mRNA into dsRNAs that are degraded to generate new siRNAs. Cell. 107:2001;297-307
13. Elbashir S.M., Martinez J., Atkaniowska A.P., Lendeckel W., Tuschl T. Functional anatomy of siRNAs for mediating efficient RNAi in Drosophila melanogaster embryo lysate. EMBO J. 20:2001;6877-6888
14. Nykanen A., Haley B., Zamore P.D. ATP requirements and small interfering RNA structure in the RNA interference pathway. Cell. 107:2001;309-321
15. Finnegan J., Margis R., Waterhouse P.M. Post-transcriptional gene silencing is not compromised in the Arabidopsis carpel factory (Dicer-like1) mutant, a homolog of Dicer-1 from Drosophila. Curr. Biol. 13:2003;236-240
16. Brigneti G., Voinnet O., Li W.-X., Ji L.-H., Ding S.-W., Baulcombe D.C. Viral pathogenicity determinants are suppressors of transgene silencing in Nicotiana benthamiana. EMBO J. 17:1998;6739-6746
17. Voinnet O., Pinto Y.M., Baulcombe D.C. Suppression of gene silencing: a general strategy used by diverse DNA and RNA viruses of plants. Proc. Natl. Acad. Sci. 96:1999;14147-14152
18. Voinnet O., Lederer C., Baulcombe D.C. A viral movement protein prevents spread of the gene silencing signal in Nicotiana benthamiana. Cell. 103:2000;157-167
19. Guo H.S., Ding S.W. A viral protein inhibits the long range signaling activity of gene silencing signal. EMBO J. 21:2002;398-407
20. Silhavy D., Molnar A., Lucioli A., Szittya G., Hornyik C., Tavazza M., Burgyan J. A viral protein suppresses RNA silencing and binds silencing-generated, 21-25-nucleotide double-stranded RNAs. EMBO J. 21:2002;3070-3080
21. Pfeffer S., Dunoyer P., Heim F., Richards K.E., Jonard G., Ziegler-Graff V. P0 of beet Western yellows virus is a suppressor of post-transcriptional gene silencing. J. Virol. 76:2002;6815-6824
22. Hart C.M., Fischer B., Neuhaus J.M., Meins F.J. Regulated inactivation of homologous gene expression in transgenic Nicotiana sylvestris plants containing a defense-related tobacco chitinase gene. Mol. Gen. Genet. 235:1992;179-188
23. de Carvalho F.N., Montagu M.V., Cornelissen M. Post-transcriptional cosuppression of [beta]-1, 3-glucanase genes does not affect accumulation of transgene nuclear mRNA. Plant Cell. 7:1995;347-358
24. Kunz C., Schob H., Stam M., Kooter J.M., Meins F.J. Developmentally regulated silencing reactivation of tobacco chitinase transgene expression. Plant J. 10:1996;437-450
25. Van Houdt H., Ingelbrecht I., Montagu M.V., Depicker A. Post-transcriptional silencing of a neomycin phosphotransferase II transgene correlates with the accumulation of unproductive RNAs and with increase cytosine methylation of 3′ flanking regions. Plant J. 12:1997;379-392
26. Mitsuhara I., Shirasawa-Seo N., Iwai T., Nakamura S., Honkura R., Ohashi Y. Release from post-transcriptional gene silencing by cell proliferation in transgenic tobacco plants: possible mechanism for non-inheritance of the silencing. Genetics. 160:2002;343-352
27. M.F.S. Vaslin, Estratégias de proteção contra vírus vegetais baseadas na utilização da região 3′ não traduzida do RNA-2 do Andean potato mottle virus (APMoV), Ph.D. Thesis, Genetics Department, Federal University of Rio de Janeiro, Brazil, 1998, 122 pp.
28. Verwoerd T.C., Dekker B.M., Hoekema A. A small-scale procedure for the rapid isolation of plant RNAs. Nucleic Acids Res. 17:1989;2362
29. Church G.M., Gilbert W. Genomic sequencing. Proc. Natl. Acad. Sci. 81:1984;1991-1995
30. Boerjan W., Bauw G., Montagu M.V., Inze D. Distinct phenotypes generated by over expression and suppression of S-adenosil-L-methionine synthetase reveal development patterns of gene silencing in tobacco. Plant Cell. 6:1994;1401-1414
31. Mallory A.C., Ely L., Smith T.H., Marathe R., Anandalakshmi R., Fagard M., Vaucheret H., Pruss G., Bowman L., Vance V.B. Hc-Pro suppression of transgene silencing eliminates the small RNAs but not transgene methylation or the mobile signal. Plant Cell. 13:2001;571-583
32. Llave C., Kasschau K.D., Carrington J.C. Virus-encoded suppressor of post-transcriptional gene silencing targets a maintenance step in the silencing pathway. Proc. Natl. Acad. Sci. 97:2000;13401-13406