Nucleotide Binding Induces Conformational Changes in Escherichia coli Transcription Termination Factor Rho

Journal of Biological Chemistry

Volumn 279, Issue 18, 2004, Pages 18370-18376

  Jeong, Yong Joo ^a   Kim, Dong Eun ^b   Patel, Smita S ^a  

^a RUTGERS ROBERT WOOD JOHNSON MEDICAL SCHOOL   (United States)

^b Dong Eui University   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINETRIPHOSPHATE; COMPLEXATION; ESCHERICHIA COLI; FLUORESCENCE; HYDROLYSIS; PROTEINS;

NUCLEOTIDE BINDING; RHO PROTEINS;

BIOCHEMISTRY;

2' O (N METHYLANTHRANILOYL)ADENOSINE 5' TRIPHOSPHATE; 3' O (N METHYLANTHRANILOYL)ADENOSINE 5' TRIPHOSPHATE; ADENOSINE TRIPHOSPHATE; DNA; NUCLEOTIDE; PROTEIN SUBUNIT; RHO FACTOR; RNA; TRANSCRIPTION TERMINATION FACTOR RHO; UNCLASSIFIED DRUG;

ARTICLE; BINDING SITE; CONFORMATIONAL TRANSITION; DISSOCIATION; ENERGY; ESCHERICHIA COLI; FLUORESCENCE; HYDROLYSIS; NONHUMAN; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN DNA BINDING; PROTEIN RNA BINDING; TRANSCRIPTION TERMINATION;

ADENOSINE TRIPHOSPHATE; ANTHRANILIC ACIDS; BINDING SITES; DNA; ESCHERICHIA COLI PROTEINS; FLUORESCENT DYES; KINETICS; PROTEIN CONFORMATION; PROTEIN STRUCTURE, QUATERNARY; PROTEIN SUBUNITS; RHO FACTOR; RNA; SPECTROMETRY, FLUORESCENCE;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; NEGIBACTERIA;

EID: 2442538223     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M309162200     Document Type: Article

References (29)

1. Brennan, C. A., Dombroski, A. J., and Platt, T. (1987) Cell 48, 945-952
2. Richardson, J. P. (1990) Biochim. Biophys. Acta 1048, 127-138
3. Richardson, J. P. (1996) J. Biol. Chem. 271, 1251-1254
4. Richardson, J. P. (2003) Cell 114, 157-159
5. Richardson, J. P. (2002) Biochim. Biophys. Acta 1577, 251-260
6. Geiselmann, J., Wang, Y., Seifried, S. E., and von Hippel, P. H. (1993) Proc. Natl. Acad. Sci. U. S. A. 90, 7754-7758
7. Lohman, T. M., and Bjornson, K. P. (1996) Annu. Rev. Biochem. 65, 169-214
8. Patel, S. S., and Picha, K. M. (2000) Annu. Rev. Biochem. 69, 651-697
9. Richardson, J. P. (1982) J. Biol. Chem. 257, 5760-5766
10. Skordalakes, E., and Berger, J. M. (2003) Cell 114, 135-146
11. Galluppi, G. R., and Richardson, J. P. (1980) J. Mol. Biol. 138, 513-539
12. Burgess, B. R., and Richardson, J. P. (2001) J. Biol. Chem. 276, 4182-4189
13. Kim, D. E., and Patel, S. S. (2001) J. Biol. Chem. 276, 13902-13910
14. McSwiggen, J. A., Bear, D. G., and von Hippel, P. H. (1988) J. Mol. Biol. 199, 609-622
15. Gogol, E. P., Seifried, S. E., and von Hippel, P. H. (1991) J. Mol. Biol. 221, 1127-1138
16. Mori, H., Imai, M., and Shigesada, K. (1989) J. Mol. Biol. 210, 39-49
17. Finger, L. R., and Richardson, J. P. (1981) Biochemistry 20, 1640-1645
18. Geiselmann, J., Yager, T. D., Gill, S. C., Calmettes, P., and von Hippel, P. H. (1992) Biochemistry 31, 111-121
19. Hiratsuka, T. (1983) Biochim. Biophys. Acta 742, 496-508
20. Jameson, D. M., and Eccleston, J. F. (1997) Methods Enzymol. 278, 363-390
21. Moore, K. J., and Lohman, T. M. (1994) Biochemistry 33, 14550-14564
22. Piper, J. M., and Lovell, S. J. (1981) Anal. Biochem. 117, 70-75
23. Johnson, K. A. (1992) in The Enzymes (Sigman, D. S., ed) pp. 1-61, Academic Press, Orlando, FL
24. Wei, R. R., and Richardson, J. P. (2001) J. Biol. Chem. 276, 28380-28387
25. Lowery, C., and Richardson, J. P. (1977) J. Biol. Chem. 252, 1381-1385
26. Cremo, C. R., Neuron, J. M., and Yount, R. G. (1990) Biochemistry 29, 3309-3319
27. Allison, T. J., Wood, T. C., Briercheck, D. M., Rastinejad, F., Richardson, J. P., and Rule, G. S. (1998) Nat. Struct. Biol. 5, 352-356
28. Yu, X., Horiguchi, T., Shigesada, K., and Egelman, E. H. (2000) J. Mol. Biol. 299, 1279-1287
29. Bogden, C. E., Fass, D., Bergman, N., Nichols, M. D., and Berger, J. M. (1999) Mol. Cell 3, 487-493