Analysis and characterization of the transcriptional unit of a new Mytilus galloprovincialis (Mollusca: Bivalvia) hsp70 gene

DNA Sequence - Journal of DNA Sequencing and Mapping

Volumn 16, Issue 1, 2005, Pages 36-43

  Kourtidis, Antonis ^a,b   Scouras, Zacharias G ^a  

^a ARISTOTLE UNIVERSITY OF THESSALONIKI   (Greece)

^b STATE UNIVERSITY OF NEW YORK   (United States)

Author keywords

Bivalves; Cytoplasmic; HSP70 family; Inducible; Mollusks; Mussel

Indexed keywords

HEAT SHOCK PROTEIN 70;

ARTICLE; CONTROLLED STUDY; DNA FLANKING REGION; DNA SEQUENCE; GENE ISOLATION; GENETIC TRANSCRIPTION; INTRON; MUSSEL; MYTILUS GALLOPROVINCIALIS; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PRIORITY JOURNAL; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; BIVALVIA; CHROMOSOME MAPPING; CLONING, MOLECULAR; DNA; EVOLUTION, MOLECULAR; HSP70 HEAT-SHOCK PROTEINS; MOLECULAR SEQUENCE DATA; OPEN READING FRAMES; PHYLOGENY; TRANSCRIPTION, GENETIC;

BIVALVIA; MOLLUSCA; MYTILUS; MYTILUS GALLOPROVINCIALIS;

EID: 24344434642     PISSN: 10425179     EISSN: None     Source Type: Journal    
DOI: 10.1080/10425170400024391     Document Type: Article

References (31)

1. Abravaya K, Phillips B, Morimoto RI. 1991. Heat-shock induced interactions of heat shock transcription factor and the human hsp70 promoter examined by in vivo footprinting. Mol Cell Biol 11(1):568-592.
2. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic local alignment search tool. J Mol Biol 215:403-410.
3. Boorstein WR, Ziegelhoffer T, Craig EA. 1994. Molecular evolution of the HSP70 multigene family. J Mol Evol 38:1-17.
4. Borchiellini C, Boury-Esnault N, Vacelet J, le Parco Y. 1998. Phylogenetic analysis of the Hsp70 sequences reveals the monophyly of Metazoa and specific phylogenetic relationships between animals and fungi. Mol Biol Evol 15(6):647-655.
5. Boutet I, Tanguy A, Rousseau S, Auffret M, Moraga D. 2003. Molecular identification and expression of heat shock cognate 70 (hsc70) and heat shock protein 70 (hsp70) genes in the Pacific oyster Crassostrea gigas. Cell Stress Chaperones 8(1):76-85.
6. Budin K, Philippe H. 1998. New insights into the phylogeny of eukaryotes based on ciliate Hsp70 sequences. Mol Biol Evol 15(8):943-956.
7. Buckley BA, Owen ME, Hofmann GE. 2001. Adjusting the thermostat: the threshold induction temperature for the heatshock response in intertidal mussels (genus Mytilus) changes as a function of thermal history. J Exp Biol 204:3571-3579.
8. Cohen RS, Meselson M. 1988. Periodic interactions of heat shock transcriptional elements. Nature 332:856-858.
9. Felsenstein J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39:783-791.
10. Gosling EM. 1992. Systematics and geographic distribution of Mytilus. In: Gosling EM, editor. The mussel Mytilus: ecology, physiology, genetics and culture. Amsterdam: Elsevier, p 1-17.
11. Gourdon I, Gricourt L, Kellner K, Roch P, Escoubas JM. 2000. Characterization of a cDNA encoding a 72kDa heat shock cognate protein (Hsc72) from the Pacific oyster Crassostrea gigas. DNA Seq 11(3-4):265-270.
12. Gupta RS, Golding GB, Singh B. 1994. HSP70 phylogeny and the relationship between Archaebacteria Eubacteria and Eukaryotes. J Mol Evol 39:537-540.
13. Koehn RK. 1991. The genetics and taxonomy of species in the genus Mytilus. Aquaculture 94:125-145.
14. Konstantopoulou I, Nikolaidis N, Scouras ZG. 1998. The hsp70 locus of Drosophila auraria (montium subgroup) is single and contains copies in a conserved arrangement. Chromosoma 107:577-586.
15. Kroeger PE, Sarge KD, Morimoto RI. 1993. Mouse heat shock transcription factors 1 and 2 prefer a trimeric binding site but interact differently with the HSP70 heat shock element. Mol Cell Biol 13(6):3370-3383.
16. Kuhl D, Kennedy TE, Barzilai A, Kandel ER. 1992. Long-term sensitisation training in Aplysia leads to an increase in the expression of BiP, the major protein chaperon of the ER. J Cell Biol 119(5):1069-1076.
17. Kumar S, Tamura K, Jacobsen IB, Nei M. 2001. MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17:1244-1245.
18. Lindquist S, Craig EA. 1988. The heat shock proteins. Ann Rev Genet 22:631-677.
19. Macario AJL, Conway de Macario E. 2000. Stress and molecular chaperones in disease. Int J Clin Lab Res 30:49-66.
20. Nei M, Kumar S. 2000. Evolutionary change of amino acid sequences. In: Nei M, Kumar S, editors. Molecular Evolution and Phylogenetics. New York: Oxford University Press, p 17-32.
21. Nikolaidis N, Scouras ZG. 2002. A polymerase chain reaction (PCR) application for free-living nematodes (Rhabditida) discrimination. Mol Ecol Notes 2:248-249.
22. Nover L, Scharf KD. 1997. Heat stress proteins and transcription factors. Cell Mol Life Sci 53:80-103.
23. Perisic O, Xiao H, Lis JT. 1989. Stable binding of Drosophila heat shock factor to head-to-head and tail-to-tail repeats of a conserved 5bp recognition unit. Cell 59(5):797-806.
24. Rathinam AV, Chen TT, Grossfeld RM. 2000. Cloning and sequence analysis of a cDNA for an inducible 70 kDa heat shock protein of the American oyster (Crassostrea gigas). DNA Seq 11(3-4):261-264.
25. Rensing SA, Maier UG. 1994. Phylogenetic analysis of the stress-70 protein family. J Mol Evol 39:80-86.
26. Rzhetsky A, Nei M. 1992. A simple method for estimating and testing minimum-evolution trees. Mol Biol Evol 9:945-967.
27. Saitou N, Nei M. 1987. The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425.
28. Snyder MJ, Girvetz E, Mulder EP. 2001. Induction of marine mollusc stress proteins by chemical or physical stress. Arch Environ Contam Toxicol 41:22-29.
29. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25(24):4876-4882.
30. Xiao H, Perisic O, Lis JT. 1991. Cooperative binding of Drosophila heat shock factor to arrays of a conserved 5bp unit. Cell 64(3):585-593.
31. Yost HJ, Lindquist S. 1986. RNA splicing is interrupted by heat shock and is rescued by heat shock protein synthesis. Cell 45(2):185-193.