Phylogenetic analysis of Na+/K+ ATPase: Insight into the mechanism for the genesis of multi-isoforms of protein complex

Journal of Biological Systems

Volumn 13, Issue 3, 2005, Pages 299-312

  Ma, Fei ^a   Huang, Huifang ^b   Lin, Luping ^b   Xue, Chenghai ^c,d   Li Ling, Jesse ^e   Chen, Liming ^b   Wang, Yiquan ^b   Li, Qingwei ^a   Yangda, L I ^c  

^a LIAONING NORMAL UNIVERSITY   (China)

^b XIAMEN UNIVERSITY   (China)

^c TSINGHUA UNIVERSITY   (China)

^d INSTITUTE OF AUTOMATION   (China)

^e CHINA MEDICAL UNIVERSITY   (China)

Author keywords

Evolution; Functional Domain; Gene Duplication; Na+ K+ ATPase; Phylogenetic Analysis

Indexed keywords

ARCHAEA; CELLULAR ORGANISMS; EUKARYOTA; PROKARYOTA; VERTEBRATA;

EID: 23944500304     PISSN: 02183390     EISSN: None     Source Type: Journal    
DOI: 10.1142/S0218339005001537     Document Type: Article

References (16)

1. Moller JV, Juul B, Le Maire M, Structural organization, ion transport, and energy transduction of P-type ATPases, Biochim Biophys Acta 1286:1-51, 1996.
2. Horisberger JD, Lemas V, Krahenbohl JP, Rossier BC, Structure-function relationship of Na, K-ATPase, Annu Rev Physiol 53:565-584, 1991.
3. Skou JC, The influence of some cations on an adenosine triphosphatase from periperal nerves, Biochim Biophys Acta 23:394-401, 1957.
4. Skulachev VP, Bioenergetics: the evolution of molecular mechanisms and the development of bioenergetic concepts, Antonie van Leeuwenhoek 65:271-284, 1994.
5. Hilge M, Siegal G, Vuister GW, Güntert P, Gloor SM, Abrahams JP, ATP-induced conformational changes of the nucleotide-binding domain of Na, K-ATPase, Nat Struct Biol 10:468-474, 2003.
6. Axelsen KB, Palmgren MG, Evolution of substrate specificities in the P-type ATPase superfamily, J Mol Evol 46:84-101, 1998.
7. +-ATPase, Proc Natl Acad Sci USA 99:15977-15982, 2002.
8. Fagan MJ, Saier MH, ATPases of eukaryotes and bacteria: sequence analyses and construction of phylogenetic trees, J Mol Evol 38:57-99, 1994.
9. Lutsenko S, Kaplan JH, Organization of P-type ATPase: significance of structural diversity, Biochemistry 34:15607-15612, 1995.
10. Palmgren MG, Axelsen KB, Evolution of P-type ATPases, Biochim Biophys Acta 1365:37-45, 1998.
11. Serrano R, Structure and function of proton translocating ATPase in plasma membranes of plants and fungi, Biochim Biophys Acta 947:1-28, 1988.
12. Thompson JD, Higgins DG, Gibson TJ, CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice, Nucleic Acids Res 22:4673-4680, 1994.
13. Kumar S, Tamura K, Jakobsen IB, Nei M, MEGA2: molecular evolutionary genetics analysis software, Bioinformatics 17:1244-1245, 2001.
14. Lynch M, Gene duplication and evolution, Science 297:945-947, 2002.
15. Crameri A, Raillard SA, Bermudez E, Stemmer WP, DNA shuffling of a family of genes from diverse species accelerates directed evolution, Nature 391:288-291, 1998.
16. Force A, Lynch M, Pickett FB, Amores A, Yan YL, Postlethwait J, Preservation of duplicate genes by complementary degenerative mutations, Genetics 151:1531-1545, 1999.